RNA–Protein interactions for RNA: ENST00000358813.4

CCL20-201, Transcript of C-C motif chemokine ligand 20, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCL20, Length 800 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-201ENST00000358813 TCOF1Q13428 1488 aaKnown RBP7.72□□□□□ -1.17
CCL20-201ENST00000358813 TNRQ92752 1358 aa7.71□□□□□ -1.17
CCL20-201ENST00000358813 SHANK2Q9UPX8 1470 aa7.71□□□□□ -1.18
CCL20-201ENST00000358813 SPDYE3A6NKU9 549 aa7.71□□□□□ -1.18
CCL20-201ENST00000358813 GDF11O95390 407 aa7.71□□□□□ -1.18
CCL20-201ENST00000358813 SSBP05455 408 aaKnown RBP eCLIP7.71□□□□□ -1.18
CCL20-201ENST00000358813 NID1P14543 1247 aa7.71□□□□□ -1.18
CCL20-201ENST00000358813 HSD3B2P26439 372 aa7.71□□□□□ -1.18
CCL20-201ENST00000358813 AFF1P51825 1210 aaKnown RBP7.71□□□□□ -1.18
CCL20-201ENST00000358813 PWP1Q13610 501 aa7.71□□□□□ -1.18
CCL20-201ENST00000358813 TMEM151AQ8N4L1 468 aa7.71□□□□□ -1.18
CCL20-201ENST00000358813 TTC9Q92623 222 aa7.71□□□□□ -1.18
CCL20-201ENST00000358813 MKL1Q969V6 931 aa7.71□□□□□ -1.18
CCL20-201ENST00000358813 PPP4R2Q9NY27 417 aa7.71□□□□□ -1.18
CCL20-201ENST00000358813 WASHC2CQ9Y4E1 1318 aa7.71□□□□□ -1.18
CCL20-201ENST00000358813 SAMD9LQ8IVG5 1584 aa7.71□□□□□ -1.18
CCL20-201ENST00000358813 MTUS2Q5JR59 1369 aa7.71□□□□□ -1.18
CCL20-201ENST00000358813 ARHGAP35Q9NRY4 1499 aa7.7□□□□□ -1.18
CCL20-201ENST00000358813 KIDINS220Q9ULH0 1771 aa7.7□□□□□ -1.18
CCL20-201ENST00000358813 K7ELQ4 463 aaPredicted RBP7.7□□□□□ -1.18
CCL20-201ENST00000358813 KIF3BO15066 747 aa7.7□□□□□ -1.18
CCL20-201ENST00000358813 GADD45BO75293 160 aaPredicted RBP7.7□□□□□ -1.18
CCL20-201ENST00000358813 KIF4AO95239 1232 aa7.7□□□□□ -1.18
CCL20-201ENST00000358813 IBSPP21815 317 aaPredicted RBP7.7□□□□□ -1.18
CCL20-201ENST00000358813 GSK3AP49840 483 aa7.7□□□□□ -1.18
CCL20-201ENST00000358813 COL9A3Q14050 684 aaPredicted RBP7.7□□□□□ -1.18
CCL20-201ENST00000358813 TRAPPC3LQ5T215 181 aa7.7□□□□□ -1.18
CCL20-201ENST00000358813 JAZF1Q86VZ6 243 aa7.7□□□□□ -1.18
CCL20-201ENST00000358813 SPON2Q9BUD6 331 aa7.7□□□□□ -1.18
CCL20-201ENST00000358813 RSRP1Q9BUV0 290 aa7.7□□□□□ -1.18
CCL20-201ENST00000358813 NOC4LQ9BVI4 516 aaKnown RBP7.7□□□□□ -1.18
CCL20-201ENST00000358813 BCO2Q9BYV7 579 aa7.7□□□□□ -1.18
CCL20-201ENST00000358813 CHRDQ9H2X0 955 aa7.7□□□□□ -1.18
CCL20-201ENST00000358813 CDC42BPBQ9Y5S2 1711 aa7.69□□□□□ -1.18
CCL20-201ENST00000358813 EREGO14944 169 aa7.69□□□□□ -1.18
CCL20-201ENST00000358813 XRCC5P13010 732 aaKnown RBP7.69□□□□□ -1.18
CCL20-201ENST00000358813 COL8A1P27658 744 aa7.69□□□□□ -1.18
CCL20-201ENST00000358813 IGBP1P78318 339 aa7.69□□□□□ -1.18
CCL20-201ENST00000358813 TCEAL1Q15170 157 aa7.69□□□□□ -1.18
CCL20-201ENST00000358813 GRIK5Q16478 980 aa7.69□□□□□ -1.18
CCL20-201ENST00000358813 GDF6Q6KF10 455 aaPredicted RBP7.69□□□□□ -1.18
CCL20-201ENST00000358813 NXPE4Q6UWF7 544 aa7.69□□□□□ -1.18
CCL20-201ENST00000358813 RELL1Q8IUW5 271 aa7.69□□□□□ -1.18
CCL20-201ENST00000358813 KIAA0825Q8IV33 1275 aa7.69□□□□□ -1.18
CCL20-201ENST00000358813 CWC22Q9HCG8 908 aaKnown RBP7.69□□□□□ -1.18
CCL20-201ENST00000358813 NPHS2Q9NP85 383 aa7.69□□□□□ -1.18
CCL20-201ENST00000358813 COPRSQ9NQ92 184 aa7.69□□□□□ -1.18
CCL20-201ENST00000358813 SALL4Q9UJQ4 1053 aa7.69□□□□□ -1.18
CCL20-201ENST00000358813 NPHP4O75161 1426 aaPredicted RBP7.69□□□□□ -1.18
CCL20-201ENST00000358813 SMNDC1O75940 238 aaKnown RBP eCLIP7.68□□□□□ -1.18
CCL20-201ENST00000358813 GSTT1P30711 240 aa7.68□□□□□ -1.18
CCL20-201ENST00000358813 ATP11AP98196 1134 aa7.68□□□□□ -1.18
CCL20-201ENST00000358813 PTPROQ16827 1216 aa7.68□□□□□ -1.18
CCL20-201ENST00000358813 PRRT3Q5FWE3 981 aa7.68□□□□□ -1.18
CCL20-201ENST00000358813 RNF187Q5TA31 235 aaPredicted RBP7.68□□□□□ -1.18
CCL20-201ENST00000358813 CEP135Q66GS9 1140 aa7.68□□□□□ -1.18
CCL20-201ENST00000358813 ALYREFQ86V81 257 aaKnown RBP7.68□□□□□ -1.18
CCL20-201ENST00000358813 WFDC8Q8IUA0 241 aa7.68□□□□□ -1.18
CCL20-201ENST00000358813 GALNT12Q8IXK2 581 aa7.68□□□□□ -1.18
CCL20-201ENST00000358813 DMRTC2Q8IXT2 367 aaPredicted RBP7.68□□□□□ -1.18
CCL20-201ENST00000358813 CEP120Q8N960 986 aa7.68□□□□□ -1.18
CCL20-201ENST00000358813 ZCRB1Q8TBF4 217 aaKnown RBP7.68□□□□□ -1.18
CCL20-201ENST00000358813 RASSF4Q9H2L5 321 aa7.68□□□□□ -1.18
CCL20-201ENST00000358813 KBTBD4Q9NVX7 518 aa7.68□□□□□ -1.18
CCL20-201ENST00000358813 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.68□□□□□ -1.18
CCL20-201ENST00000358813 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.68□□□□□ -1.18
CCL20-201ENST00000358813 CASKIN1Q8WXD9 1431 aa7.68□□□□□ -1.18
CCL20-201ENST00000358813 UGGT1Q9NYU2 1555 aa7.67□□□□□ -1.18
CCL20-201ENST00000358813 POLR1AO95602 1720 aaPredicted RBP7.67□□□□□ -1.18
CCL20-201ENST00000358813 hCG_2014768A0A024R1R8 64 aa7.67□□□□□ -1.18
CCL20-201ENST00000358813 TRIM28Q13263 835 aaKnown RBP7.67□□□□□ -1.18
CCL20-201ENST00000358813 MSL1Q68DK7 614 aa7.67□□□□□ -1.18
CCL20-201ENST00000358813 DCAF5Q96JK2 942 aa7.67□□□□□ -1.18
CCL20-201ENST00000358813 BRINP2Q9C0B6 783 aa7.67□□□□□ -1.18
CCL20-201ENST00000358813 SIRPGQ9P1W8 387 aa7.67□□□□□ -1.18
CCL20-201ENST00000358813 STRIP2Q9ULQ0 834 aa7.67□□□□□ -1.18
CCL20-201ENST00000358813 TTF2Q9UNY4 1162 aaKnown RBP7.67□□□□□ -1.18
CCL20-201ENST00000358813 MRPL42Q9Y6G3 142 aaKnown RBP7.67□□□□□ -1.18
CCL20-201ENST00000358813 KIAA1107Q9UPP5 1409 aa7.67□□□□□ -1.18
CCL20-201ENST00000358813 FYCO1Q9BQS8 1478 aa7.67□□□□□ -1.18
CCL20-201ENST00000358813 DNMT1P26358 1616 aaKnown RBP7.67□□□□□ -1.18
CCL20-201ENST00000358813 ADGBQ8N7X0 1667 aa7.67□□□□□ -1.18
CCL20-201ENST00000358813 FAM229AH3BQW9 127 aa7.66□□□□□ -1.18
CCL20-201ENST00000358813 TSPY4P0CV99 314 aa7.66□□□□□ -1.18
CCL20-201ENST00000358813 TSPY10P0CW01 314 aa7.66□□□□□ -1.18
CCL20-201ENST00000358813 EDN3P14138 238 aa7.66□□□□□ -1.18
CCL20-201ENST00000358813 NASPP49321 788 aaPredicted RBP7.66□□□□□ -1.18
CCL20-201ENST00000358813 RAC1P63000 192 aa7.66□□□□□ -1.18
CCL20-201ENST00000358813 SERINC3Q13530 473 aa7.66□□□□□ -1.18
CCL20-201ENST00000358813 MEX3CQ5U5Q3 659 aaKnown RBP7.66□□□□□ -1.18
CCL20-201ENST00000358813 IL22RA1Q8N6P7 574 aa7.66□□□□□ -1.18
CCL20-201ENST00000358813 KCNB2Q92953 911 aa7.66□□□□□ -1.18
CCL20-201ENST00000358813 PBX4Q9BYU1 374 aa7.66□□□□□ -1.18
CCL20-201ENST00000358813 TRIM33Q9UPN9 1127 aa7.66□□□□□ -1.18
CCL20-201ENST00000358813 TRAK1Q9UPV9 953 aa7.66□□□□□ -1.18
CCL20-201ENST00000358813 EID1Q9Y6B2 187 aa7.66□□□□□ -1.18
CCL20-201ENST00000358813 NLRP1Q9C000 1473 aa7.66□□□□□ -1.18
CCL20-201ENST00000358813 KDM5DQ9BY66 1539 aa7.66□□□□□ -1.18
CCL20-201ENST00000358813 RNF17Q9BXT8 1623 aaKnown RBP7.66□□□□□ -1.18
CCL20-201ENST00000358813 U2SURPO15042 1029 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms