RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 LMNB1P20700 586 aa16.71■□□□□ 0.27
NIPAL3-203ENST00000358028 CC2D2BQ6DHV5 1058 aa16.71■□□□□ 0.27
NIPAL3-203ENST00000358028 ANKRD18AQ8IVF6 992 aa16.71■□□□□ 0.27
NIPAL3-203ENST00000358028 USP25Q9UHP3 1055 aa16.71■□□□□ 0.27
NIPAL3-203ENST00000358028 ZNF532Q9HCE3 1301 aa16.71■□□□□ 0.26
NIPAL3-203ENST00000358028 PDE6AP16499 860 aa16.7■□□□□ 0.26
NIPAL3-203ENST00000358028 ATL3Q6DD88 541 aa16.7■□□□□ 0.26
NIPAL3-203ENST00000358028 TMC4Q7Z404 712 aa16.7■□□□□ 0.26
NIPAL3-203ENST00000358028 RALYLQ86SE5 291 aaKnown RBP16.7■□□□□ 0.26
NIPAL3-203ENST00000358028 CDC5LQ99459 802 aaKnown RBP16.7■□□□□ 0.26
NIPAL3-203ENST00000358028 MPHOSPH8Q99549 860 aa16.7■□□□□ 0.26
NIPAL3-203ENST00000358028 GPHNQ9NQX3 736 aaPredicted RBP16.7■□□□□ 0.26
NIPAL3-203ENST00000358028 ZNF277Q9NRM2 450 aaPredicted RBP16.7■□□□□ 0.26
NIPAL3-203ENST00000358028 CFAP45Q9UL16 551 aa16.7■□□□□ 0.26
NIPAL3-203ENST00000358028 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.7■□□□□ 0.26
NIPAL3-203ENST00000358028 FOSBP53539 338 aa16.69■□□□□ 0.26
NIPAL3-203ENST00000358028 ANTXR2P58335 489 aa16.69■□□□□ 0.26
NIPAL3-203ENST00000358028 RBM43Q6ZSC3 357 aaKnown RBP16.69■□□□□ 0.26
NIPAL3-203ENST00000358028 PSMD1Q99460 953 aa16.69■□□□□ 0.26
NIPAL3-203ENST00000358028 TCRBV5S4A2TA0A5A2 114 aa16.69■□□□□ 0.26
NIPAL3-203ENST00000358028 RRP9O43818 475 aaKnown RBP16.69■□□□□ 0.26
NIPAL3-203ENST00000358028 SPATA5Q8NB90 893 aa16.69■□□□□ 0.26
NIPAL3-203ENST00000358028 TMX4Q9H1E5 349 aaPredicted RBP16.69■□□□□ 0.26
NIPAL3-203ENST00000358028 DPP8Q6V1X1 898 aaPredicted RBP16.68■□□□□ 0.26
NIPAL3-203ENST00000358028 MPNDQ8N594 471 aa16.68■□□□□ 0.26
NIPAL3-203ENST00000358028 FAM200AQ8TCP9 573 aa16.68■□□□□ 0.26
NIPAL3-203ENST00000358028 PGBD1Q96JS3 809 aa16.68■□□□□ 0.26
NIPAL3-203ENST00000358028 NBPF3Q9H094 633 aa16.68■□□□□ 0.26
NIPAL3-203ENST00000358028 CLSTN2Q9H4D0 955 aa16.68■□□□□ 0.26
NIPAL3-203ENST00000358028 KLF18A0A0U1RQI7 1052 aa16.67■□□□□ 0.26
NIPAL3-203ENST00000358028 CAVIN2O95810 425 aa16.67■□□□□ 0.26
NIPAL3-203ENST00000358028 ADD1P35611 737 aaKnown RBP16.67■□□□□ 0.26
NIPAL3-203ENST00000358028 IGHMBP2P38935 993 aaKnown RBP16.67■□□□□ 0.26
NIPAL3-203ENST00000358028 GPSM2P81274 684 aa16.67■□□□□ 0.26
NIPAL3-203ENST00000358028 ZC3H4Q9UPT8 1303 aaKnown RBP16.67■□□□□ 0.26
NIPAL3-203ENST00000358028 GOLGA8BA8MQT2 603 aa16.66■□□□□ 0.26
NIPAL3-203ENST00000358028 FDPSP14324 419 aaKnown RBP16.66■□□□□ 0.26
NIPAL3-203ENST00000358028 RASGRF1Q13972 1273 aa16.66■□□□□ 0.26
NIPAL3-203ENST00000358028 GRIPAP1Q4V328 841 aa16.66■□□□□ 0.26
NIPAL3-203ENST00000358028 TBC1D10CQ8IV04 446 aa16.66■□□□□ 0.26
NIPAL3-203ENST00000358028 BICD2Q8TD16 824 aa16.66■□□□□ 0.26
NIPAL3-203ENST00000358028 TNMDQ9H2S6 317 aa16.66■□□□□ 0.26
NIPAL3-203ENST00000358028 NMRK2Q9NPI5 230 aa16.66■□□□□ 0.26
NIPAL3-203ENST00000358028 BSDC1Q9NW68 430 aaPredicted RBP16.66■□□□□ 0.26
NIPAL3-203ENST00000358028 DACT1Q9NYF0 836 aa16.66■□□□□ 0.26
NIPAL3-203ENST00000358028 HPS5Q9UPZ3 1129 aa16.66■□□□□ 0.26
NIPAL3-203ENST00000358028 DHX16O60231 1041 aaKnown RBP16.66■□□□□ 0.26
NIPAL3-203ENST00000358028 APPP05067 770 aa16.66■□□□□ 0.26
NIPAL3-203ENST00000358028 IARSP41252 1262 aaKnown RBP16.66■□□□□ 0.26
NIPAL3-203ENST00000358028 TYRO3Q06418 890 aa16.66■□□□□ 0.26
NIPAL3-203ENST00000358028 TRDNQ13061 729 aa16.66■□□□□ 0.26
NIPAL3-203ENST00000358028 PIBF1Q8WXW3 757 aa16.66■□□□□ 0.26
NIPAL3-203ENST00000358028 ZNF396Q96N95 335 aaPredicted RBP16.66■□□□□ 0.26
NIPAL3-203ENST00000358028 STRBPQ96SI9 672 aaKnown RBP16.66■□□□□ 0.26
NIPAL3-203ENST00000358028 RTFDC1Q9BY42 306 aaPredicted RBP16.66■□□□□ 0.26
NIPAL3-203ENST00000358028 ZMYM6O95789 1325 aa16.65■□□□□ 0.26
NIPAL3-203ENST00000358028 GOLGA6L6A8MZA4 724 aa16.65■□□□□ 0.26
NIPAL3-203ENST00000358028 MAP3K12Q12852 859 aa16.65■□□□□ 0.26
NIPAL3-203ENST00000358028 ALX1Q15699 326 aa16.65■□□□□ 0.26
NIPAL3-203ENST00000358028 AIDAQ96BJ3 306 aa16.65■□□□□ 0.26
NIPAL3-203ENST00000358028 RCOR1Q9UKL0 485 aa16.65■□□□□ 0.26
NIPAL3-203ENST00000358028 MINPP1Q9UNW1 487 aa16.65■□□□□ 0.26
NIPAL3-203ENST00000358028 SNAP23O00161 211 aa16.64■□□□□ 0.25
NIPAL3-203ENST00000358028 CAMK4Q16566 473 aa16.64■□□□□ 0.25
NIPAL3-203ENST00000358028 AOC3Q16853 763 aa16.64■□□□□ 0.25
NIPAL3-203ENST00000358028 SASS6Q6UVJ0 657 aa16.64■□□□□ 0.25
NIPAL3-203ENST00000358028 MAGEB6Q8N7X4 407 aa16.64■□□□□ 0.25
NIPAL3-203ENST00000358028 GPR101Q96P66 508 aaPredicted RBP16.64■□□□□ 0.25
NIPAL3-203ENST00000358028 POLLQ9UGP5 575 aa16.64■□□□□ 0.25
NIPAL3-203ENST00000358028 R3HCC1Q9Y3T6 440 aaKnown RBP16.64■□□□□ 0.25
NIPAL3-203ENST00000358028 MRVI1Q9Y6F6 885 aa16.64■□□□□ 0.25
NIPAL3-203ENST00000358028 PPFIA3O75145 1194 aa16.64■□□□□ 0.25
NIPAL3-203ENST00000358028 GUCY1B3Q02153 619 aa16.64■□□□□ 0.25
NIPAL3-203ENST00000358028 CYB5R4Q7L1T6 521 aa16.64■□□□□ 0.25
NIPAL3-203ENST00000358028 RGS22Q8NE09 1264 aa16.64■□□□□ 0.25
NIPAL3-203ENST00000358028 PODXL2Q9NZ53 605 aa16.64■□□□□ 0.25
NIPAL3-203ENST00000358028 ANKIB1Q9P2G1 1089 aa16.64■□□□□ 0.25
NIPAL3-203ENST00000358028 XDHP47989 1333 aa16.63■□□□□ 0.25
NIPAL3-203ENST00000358028 SCN9AQ15858 1988 aa16.63■□□□□ 0.25
NIPAL3-203ENST00000358028 WTIPA6NIX2 430 aaPredicted RBP16.63■□□□□ 0.25
NIPAL3-203ENST00000358028 PATL2C9JE40 543 aaKnown RBP16.63■□□□□ 0.25
NIPAL3-203ENST00000358028 SH2B2O14492 632 aaPredicted RBP16.63■□□□□ 0.25
NIPAL3-203ENST00000358028 CTAGE5O15320 804 aa16.63■□□□□ 0.25
NIPAL3-203ENST00000358028 PPIP5K2O43314 1243 aa16.63■□□□□ 0.25
NIPAL3-203ENST00000358028 NR1I2O75469 434 aa16.63■□□□□ 0.25
NIPAL3-203ENST00000358028 CEBPZQ03701 1054 aaKnown RBP16.63■□□□□ 0.25
NIPAL3-203ENST00000358028 CHRNDQ07001 517 aa16.63■□□□□ 0.25
NIPAL3-203ENST00000358028 TBC1D16Q8TBP0 767 aa16.63■□□□□ 0.25
NIPAL3-203ENST00000358028 USP28Q96RU2 1077 aa16.63■□□□□ 0.25
NIPAL3-203ENST00000358028 C6orf229H3BNL8 230 aa16.62■□□□□ 0.25
NIPAL3-203ENST00000358028 UFL1O94874 794 aa16.62■□□□□ 0.25
NIPAL3-203ENST00000358028 MBD4O95243 580 aa16.62■□□□□ 0.25
NIPAL3-203ENST00000358028 BCAMP50895 628 aa16.62■□□□□ 0.25
NIPAL3-203ENST00000358028 LARGE2Q8N3Y3 721 aa16.62■□□□□ 0.25
NIPAL3-203ENST00000358028 SUPT20HQ8NEM7 779 aa16.62■□□□□ 0.25
NIPAL3-203ENST00000358028 DENND2AQ9ULE3 1009 aa16.62■□□□□ 0.25
NIPAL3-203ENST00000358028 ANGEL1Q9UNK9 670 aaKnown RBP16.62■□□□□ 0.25
NIPAL3-203ENST00000358028 PSME4Q14997 1843 aa16.62■□□□□ 0.25
NIPAL3-203ENST00000358028 CPLX1O14810 134 aa16.61■□□□□ 0.25
NIPAL3-203ENST00000358028 TOMM70O94826 608 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms