RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 PUM3Q15397 648 aaKnown RBP23.6■■□□□ 1.37
COL13A1-202ENST00000357811 FAM177A1Q8N128 213 aaPredicted RBP23.6■■□□□ 1.37
COL13A1-202ENST00000357811 LCORLQ8N3X6 602 aa23.6■■□□□ 1.37
COL13A1-202ENST00000357811 CDKL5O76039 1030 aa23.59■■□□□ 1.37
COL13A1-202ENST00000357811 NR5A1Q13285 461 aa23.59■■□□□ 1.37
COL13A1-202ENST00000357811 ELF2Q15723 593 aa23.59■■□□□ 1.37
COL13A1-202ENST00000357811 LRRN4CLQ8ND94 238 aa23.59■■□□□ 1.37
COL13A1-202ENST00000357811 CNNM3Q8NE01 707 aa23.59■■□□□ 1.37
COL13A1-202ENST00000357811 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.59■■□□□ 1.37
COL13A1-202ENST00000357811 TMX1Q9H3N1 280 aa23.59■■□□□ 1.37
COL13A1-202ENST00000357811 SOS2Q07890 1332 aaPredicted RBP23.59■■□□□ 1.37
COL13A1-202ENST00000357811 MINDY4BA8MYZ0 360 aa23.59■■□□□ 1.37
COL13A1-202ENST00000357811 UBASH3AP57075 661 aa23.58■■□□□ 1.37
COL13A1-202ENST00000357811 TPM4P67936 248 aa23.58■■□□□ 1.37
COL13A1-202ENST00000357811 ACSBG1Q96GR2 724 aa23.58■■□□□ 1.37
COL13A1-202ENST00000357811 HSD3B7Q9H2F3 369 aa23.58■■□□□ 1.37
COL13A1-202ENST00000357811 ABCF2Q9UG63 623 aa23.58■■□□□ 1.37
COL13A1-202ENST00000357811 PCDHA5Q9Y5H7 936 aa23.58■■□□□ 1.37
COL13A1-202ENST00000357811 SLC4A4Q9Y6R1 1079 aa23.58■■□□□ 1.37
COL13A1-202ENST00000357811 UBR2Q8IWV8 1755 aa23.58■■□□□ 1.37
COL13A1-202ENST00000357811 ABCC6O95255 1503 aa23.58■■□□□ 1.37
COL13A1-202ENST00000357811 ZSCAN20P17040 1043 aaPredicted RBP23.58■■□□□ 1.37
COL13A1-202ENST00000357811 GSDMDP57764 484 aa23.58■■□□□ 1.37
COL13A1-202ENST00000357811 SSRP1Q08945 709 aaKnown RBP23.58■■□□□ 1.37
COL13A1-202ENST00000357811 SUSD4Q5VX71 490 aa23.58■■□□□ 1.37
COL13A1-202ENST00000357811 METTL16Q86W50 562 aaKnown RBP23.58■■□□□ 1.37
COL13A1-202ENST00000357811 HOMER1Q86YM7 354 aa23.58■■□□□ 1.37
COL13A1-202ENST00000357811 LPIN2Q92539 896 aa23.58■■□□□ 1.37
COL13A1-202ENST00000357811 MAP3K14Q99558 947 aa23.58■■□□□ 1.37
COL13A1-202ENST00000357811 FANCLQ9NW38 375 aa23.58■■□□□ 1.37
COL13A1-202ENST00000357811 KIF18AQ8NI77 898 aa23.58■■□□□ 1.36
COL13A1-202ENST00000357811 SDR42E1Q8WUS8 393 aa23.58■■□□□ 1.36
COL13A1-202ENST00000357811 KCNH3Q9ULD8 1083 aa23.58■■□□□ 1.36
COL13A1-202ENST00000357811 PDE4BQ07343 736 aa23.57■■□□□ 1.36
COL13A1-202ENST00000357811 MAP3K12Q12852 859 aa23.57■■□□□ 1.36
COL13A1-202ENST00000357811 MFSD6Q6ZSS7 791 aa23.57■■□□□ 1.36
COL13A1-202ENST00000357811 TICAM2Q86XR7 235 aa23.57■■□□□ 1.36
COL13A1-202ENST00000357811 PPP1R13BQ96KQ4 1090 aa23.57■■□□□ 1.36
COL13A1-202ENST00000357811 CDHR2Q9BYE9 1310 aa23.57■■□□□ 1.36
COL13A1-202ENST00000357811 DIS3L2Q8IYB7 885 aaKnown RBP23.57■■□□□ 1.36
COL13A1-202ENST00000357811 TRMT44Q8IYL2 757 aaKnown RBP23.57■■□□□ 1.36
COL13A1-202ENST00000357811 OSBPL5Q9H0X9 879 aaPredicted RBP23.57■■□□□ 1.36
COL13A1-202ENST00000357811 AKAP11Q9UKA4 1901 aa23.57■■□□□ 1.36
COL13A1-202ENST00000357811 PARP4Q9UKK3 1724 aaKnown RBP23.56■■□□□ 1.36
COL13A1-202ENST00000357811 GSG1L2A8MUP6 293 aa23.56■■□□□ 1.36
COL13A1-202ENST00000357811 PATL2C9JE40 543 aaKnown RBP23.56■■□□□ 1.36
COL13A1-202ENST00000357811 LRP2BPQ9P2M1 347 aa23.56■■□□□ 1.36
COL13A1-202ENST00000357811 JMYQ8N9B5 988 aa23.55■■□□□ 1.36
COL13A1-202ENST00000357811 OXER1Q8TDS5 423 aa23.55■■□□□ 1.36
COL13A1-202ENST00000357811 TMEM87BQ96K49 555 aa23.55■■□□□ 1.36
COL13A1-202ENST00000357811 ARID4AP29374 1257 aaPredicted RBP23.55■■□□□ 1.36
COL13A1-202ENST00000357811 USP49Q70CQ1 688 aa23.55■■□□□ 1.36
COL13A1-202ENST00000357811 UQCRFS1P1P0C7P4 283 aa23.55■■□□□ 1.36
COL13A1-202ENST00000357811 SLC5A1P13866 664 aa23.55■■□□□ 1.36
COL13A1-202ENST00000357811 BMP6P22004 513 aa23.55■■□□□ 1.36
COL13A1-202ENST00000357811 AKNAD1Q5T1N1 836 aa23.55■■□□□ 1.36
COL13A1-202ENST00000357811 POLR2DO15514 142 aaKnown RBP23.54■■□□□ 1.36
COL13A1-202ENST00000357811 HPSEQ9Y251 543 aa23.54■■□□□ 1.36
COL13A1-202ENST00000357811 FAM205CA6NFA0 338 aa23.54■■□□□ 1.36
COL13A1-202ENST00000357811 PRR29P0C7W0 189 aa23.54■■□□□ 1.36
COL13A1-202ENST00000357811 TOB1P50616 345 aaPredicted RBP23.54■■□□□ 1.36
COL13A1-202ENST00000357811 PCDHB6Q9Y5E3 794 aa23.54■■□□□ 1.36
COL13A1-202ENST00000357811 SPEF2Q9C093 1822 aa23.54■■□□□ 1.36
COL13A1-202ENST00000357811 CYP2D7A0A087X1C5 515 aa23.53■■□□□ 1.36
COL13A1-202ENST00000357811 PRDM1O75626 825 aa23.53■■□□□ 1.36
COL13A1-202ENST00000357811 MYL5Q02045 173 aa23.53■■□□□ 1.36
COL13A1-202ENST00000357811 NOSTRINQ8IVI9 506 aa23.53■■□□□ 1.36
COL13A1-202ENST00000357811 UTP14AQ9BVJ6 771 aaKnown RBP23.53■■□□□ 1.36
COL13A1-202ENST00000357811 TOGARAM1Q9Y4F4 1720 aa23.53■■□□□ 1.36
COL13A1-202ENST00000357811 RTN1Q16799 776 aa23.53■■□□□ 1.36
COL13A1-202ENST00000357811 RESP18Q5W5W9 173 aa23.53■■□□□ 1.36
COL13A1-202ENST00000357811 BAZ2BQ9UIF8 2168 aaKnown RBP23.53■■□□□ 1.36
COL13A1-202ENST00000357811 WTAPQ15007 396 aa23.52■■□□□ 1.36
COL13A1-202ENST00000357811 KMT5BQ4FZB7 885 aa23.52■■□□□ 1.36
COL13A1-202ENST00000357811 OLFM4Q6UX06 510 aa23.52■■□□□ 1.36
COL13A1-202ENST00000357811 KRBA2Q6ZNG9 492 aa23.52■■□□□ 1.36
COL13A1-202ENST00000357811 FGFR2P21802 821 aa23.52■■□□□ 1.36
COL13A1-202ENST00000357811 ADGRA1Q86SQ6 560 aa23.52■■□□□ 1.36
COL13A1-202ENST00000357811 BPIFA3Q9BQP9 254 aa23.52■■□□□ 1.36
COL13A1-202ENST00000357811 IMPACTQ9P2X3 320 aa23.52■■□□□ 1.36
COL13A1-202ENST00000357811 PPP6R2O75170 966 aa23.52■■□□□ 1.36
COL13A1-202ENST00000357811 CASP1P29466 404 aa23.52■■□□□ 1.36
COL13A1-202ENST00000357811 ERCC6LQ2NKX8 1250 aa23.52■■□□□ 1.36
COL13A1-202ENST00000357811 SLC4A8Q2Y0W8 1093 aa23.52■■□□□ 1.36
COL13A1-202ENST00000357811 SMIM5Q71RC9 77 aa23.52■■□□□ 1.36
COL13A1-202ENST00000357811 CCDC150Q8NCX0 1101 aa23.52■■□□□ 1.36
COL13A1-202ENST00000357811 CABP5Q9NP86 173 aa23.52■■□□□ 1.36
COL13A1-202ENST00000357811 SERTAD1Q9UHV2 236 aa23.52■■□□□ 1.36
COL13A1-202ENST00000357811 DNAI1Q9UI46 699 aa23.52■■□□□ 1.36
COL13A1-202ENST00000357811 WDR19Q8NEZ3 1342 aa23.52■■□□□ 1.35
COL13A1-202ENST00000357811 KRI1Q8N9T8 703 aaKnown RBP23.51■■□□□ 1.35
COL13A1-202ENST00000357811 TUBE1Q9UJT0 475 aa23.51■■□□□ 1.35
COL13A1-202ENST00000357811 SAFBQ15424 915 aaKnown RBP eCLIP23.51■■□□□ 1.35
COL13A1-202ENST00000357811 EXOC5O00471 708 aa23.5■■□□□ 1.35
COL13A1-202ENST00000357811 FBXO38Q6PIJ6 1188 aa23.5■■□□□ 1.35
COL13A1-202ENST00000357811 SGMS1Q86VZ5 419 aa23.5■■□□□ 1.35
COL13A1-202ENST00000357811 ABCC12Q96J65 1359 aa23.5■■□□□ 1.35
COL13A1-202ENST00000357811 TRIM22Q8IYM9 498 aa23.5■■□□□ 1.35
COL13A1-202ENST00000357811 MYH7P12883 1935 aa23.5■■□□□ 1.35
COL13A1-202ENST00000357811 PLEKHG2Q9H7P9 1386 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms