RNA–Protein interactions for RNA: ENST00000357632.6

CCR9-202, Transcript of C-C motif chemokine receptor 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR9, Length 2,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-202ENST00000357632 TMEM87AQ8NBN3 555 aa12.2□□□□□ -0.46
CCR9-202ENST00000357632 NSUN7Q8NE18 718 aaKnown RBP12.2□□□□□ -0.46
CCR9-202ENST00000357632 IGDCC4Q8TDY8 1250 aa12.2□□□□□ -0.46
CCR9-202ENST00000357632 ISY1Q9ULR0 285 aaKnown RBP12.2□□□□□ -0.46
CCR9-202ENST00000357632 SLX4Q8IY92 1834 aa12.19□□□□□ -0.46
CCR9-202ENST00000357632 NEDD4P46934 1319 aa12.19□□□□□ -0.46
CCR9-202ENST00000357632 KLHL40Q2TBA0 621 aa12.19□□□□□ -0.46
CCR9-202ENST00000357632 SOGA3Q5TF21 947 aa12.19□□□□□ -0.46
CCR9-202ENST00000357632 MCTP1Q6DN14 999 aa12.19□□□□□ -0.46
CCR9-202ENST00000357632 CTR9Q6PD62 1173 aa12.19□□□□□ -0.46
CCR9-202ENST00000357632 SDR42E1Q8WUS8 393 aa12.19□□□□□ -0.46
CCR9-202ENST00000357632 LRRC2Q9BYS8 371 aa12.19□□□□□ -0.46
CCR9-202ENST00000357632 ROBO3Q96MS0 1386 aa12.19□□□□□ -0.46
CCR9-202ENST00000357632 CCDC196A0A1B0GTZ2 297 aa12.19□□□□□ -0.46
CCR9-202ENST00000357632 CCDC69A6NI79 296 aa12.19□□□□□ -0.46
CCR9-202ENST00000357632 IFIT3O14879 490 aaKnown RBP12.19□□□□□ -0.46
CCR9-202ENST00000357632 NCLP19338 710 aaKnown RBP12.19□□□□□ -0.46
CCR9-202ENST00000357632 CTDSPL2Q05D32 466 aa12.19□□□□□ -0.46
CCR9-202ENST00000357632 COL9A3Q14050 684 aaPredicted RBP12.19□□□□□ -0.46
CCR9-202ENST00000357632 GSE1Q14687 1217 aa12.19□□□□□ -0.46
CCR9-202ENST00000357632 TMEM67Q5HYA8 995 aa12.19□□□□□ -0.46
CCR9-202ENST00000357632 CYB5R4Q7L1T6 521 aa12.19□□□□□ -0.46
CCR9-202ENST00000357632 ZSWIM5Q9P217 1185 aa12.19□□□□□ -0.46
CCR9-202ENST00000357632 CDK5RAP2Q96SN8 1893 aa12.19□□□□□ -0.46
CCR9-202ENST00000357632 GOLGA8BA8MQT2 603 aa12.18□□□□□ -0.46
CCR9-202ENST00000357632 MINDY4BA8MYZ0 360 aa12.18□□□□□ -0.46
CCR9-202ENST00000357632 CPLX1O14810 134 aa12.18□□□□□ -0.46
CCR9-202ENST00000357632 KDM4AO75164 1064 aa12.18□□□□□ -0.46
CCR9-202ENST00000357632 USP5P45974 858 aa12.18□□□□□ -0.46
CCR9-202ENST00000357632 HDLBPQ00341 1268 aaKnown RBP12.18□□□□□ -0.46
CCR9-202ENST00000357632 WTAPQ15007 396 aa12.18□□□□□ -0.46
CCR9-202ENST00000357632 ATL3Q6DD88 541 aa12.18□□□□□ -0.46
CCR9-202ENST00000357632 IQCA1Q86XH1 822 aa12.18□□□□□ -0.46
CCR9-202ENST00000357632 UBAC1Q9BSL1 405 aa12.18□□□□□ -0.46
CCR9-202ENST00000357632 ZBTB43O43298 467 aa12.18□□□□□ -0.46
CCR9-202ENST00000357632 RTKN2Q8IZC4 609 aa12.18□□□□□ -0.46
CCR9-202ENST00000357632 C7orf43Q8WVR3 580 aa12.18□□□□□ -0.46
CCR9-202ENST00000357632 LY9Q9HBG7 655 aa12.18□□□□□ -0.46
CCR9-202ENST00000357632 MKRN1Q9UHC7 482 aaKnown RBP12.18□□□□□ -0.46
CCR9-202ENST00000357632 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.18□□□□□ -0.46
CCR9-202ENST00000357632 PSME4Q14997 1843 aa12.17□□□□□ -0.46
CCR9-202ENST00000357632 PTPDC1A2A3K4 754 aa12.17□□□□□ -0.46
CCR9-202ENST00000357632 USP17L12C9JPN9 530 aa12.17□□□□□ -0.46
CCR9-202ENST00000357632 USP17L21D6R901 530 aa12.17□□□□□ -0.46
CCR9-202ENST00000357632 CALM1P0DP23 149 aa12.17□□□□□ -0.46
CCR9-202ENST00000357632 CALM2P0DP24 149 aa12.17□□□□□ -0.46
CCR9-202ENST00000357632 CALM3P0DP25 149 aa12.17□□□□□ -0.46
CCR9-202ENST00000357632 METAP2P50579 478 aaKnown RBP eCLIP12.17□□□□□ -0.46
CCR9-202ENST00000357632 APOA5Q6Q788 366 aa12.17□□□□□ -0.46
CCR9-202ENST00000357632 HHIPL2Q6UWX4 724 aa12.17□□□□□ -0.46
CCR9-202ENST00000357632 NFXL1Q6ZNB6 911 aa12.17□□□□□ -0.46
CCR9-202ENST00000357632 CHST3Q7LGC8 479 aa12.17□□□□□ -0.46
CCR9-202ENST00000357632 LMBRD1Q9NUN5 540 aa12.17□□□□□ -0.46
CCR9-202ENST00000357632 SLC12A7Q9Y666 1083 aa12.17□□□□□ -0.46
CCR9-202ENST00000357632 DDX60LQ5H9U9 1706 aaKnown RBP12.17□□□□□ -0.46
CCR9-202ENST00000357632 H3BQV1 296 aa12.17□□□□□ -0.46
CCR9-202ENST00000357632 TGFB2P61812 414 aa12.17□□□□□ -0.46
CCR9-202ENST00000357632 GTF2IP78347 998 aa12.17□□□□□ -0.46
CCR9-202ENST00000357632 IFFO2Q5TF58 517 aa12.17□□□□□ -0.46
CCR9-202ENST00000357632 STRIP1Q5VSL9 837 aa12.17□□□□□ -0.46
CCR9-202ENST00000357632 DEFB132Q7Z7B7 95 aa12.17□□□□□ -0.46
CCR9-202ENST00000357632 WASF1Q92558 559 aa12.17□□□□□ -0.46
CCR9-202ENST00000357632 TOMM22Q9NS69 142 aa12.17□□□□□ -0.46
CCR9-202ENST00000357632 BRPF3Q9ULD4 1205 aa12.17□□□□□ -0.46
CCR9-202ENST00000357632 SNED1Q8TER0 1413 aa12.17□□□□□ -0.46
CCR9-202ENST00000357632 STK36Q9NRP7 1315 aa12.16□□□□□ -0.46
CCR9-202ENST00000357632 VPS37CA5D8V6 355 aaPredicted RBP12.16□□□□□ -0.46
CCR9-202ENST00000357632 BTDP43251 543 aa12.16□□□□□ -0.46
CCR9-202ENST00000357632 C12orf60Q5U649 245 aa12.16□□□□□ -0.46
CCR9-202ENST00000357632 TTLL6Q8N841 843 aa12.16□□□□□ -0.46
CCR9-202ENST00000357632 GPR101Q96P66 508 aaPredicted RBP12.16□□□□□ -0.46
CCR9-202ENST00000357632 NAP1L2Q9ULW6 460 aaPredicted RBP12.16□□□□□ -0.46
CCR9-202ENST00000357632 HPS5Q9UPZ3 1129 aa12.16□□□□□ -0.46
CCR9-202ENST00000357632 MYH15Q9Y2K3 1946 aa12.16□□□□□ -0.46
CCR9-202ENST00000357632 RIMBP2O15034 1052 aa12.16□□□□□ -0.46
CCR9-202ENST00000357632 CCDC93Q567U6 631 aa12.16□□□□□ -0.46
CCR9-202ENST00000357632 PSMD1Q99460 953 aa12.16□□□□□ -0.46
CCR9-202ENST00000357632 MCM9Q9NXL9 1143 aa12.16□□□□□ -0.46
CCR9-202ENST00000357632 DDX49Q9Y6V7 483 aaKnown RBP12.16□□□□□ -0.46
CCR9-202ENST00000357632 MYH1P12882 1939 aa12.15□□□□□ -0.46
CCR9-202ENST00000357632 CTDNEP1O95476 244 aa12.15□□□□□ -0.46
CCR9-202ENST00000357632 POLD1P28340 1107 aa12.15□□□□□ -0.46
CCR9-202ENST00000357632 CCT2P78371 535 aaKnown RBP12.15□□□□□ -0.46
CCR9-202ENST00000357632 KRT85P78386 507 aa12.15□□□□□ -0.46
CCR9-202ENST00000357632 KIAA2012Q0VF49 1180 aa12.15□□□□□ -0.46
CCR9-202ENST00000357632 RRP12Q5JTH9 1297 aaKnown RBP12.15□□□□□ -0.47
CCR9-202ENST00000357632 SYAP1Q96A49 352 aaPredicted RBP12.15□□□□□ -0.47
CCR9-202ENST00000357632 ZSCAN10Q96SZ4 725 aaPredicted RBP12.15□□□□□ -0.47
CCR9-202ENST00000357632 SCAND2PQ9GZW5 306 aaPredicted RBP12.15□□□□□ -0.47
CCR9-202ENST00000357632 TCP11L1Q9NUJ3 509 aa12.15□□□□□ -0.47
CCR9-202ENST00000357632 RBM28Q9NW13 759 aaKnown RBP12.15□□□□□ -0.47
CCR9-202ENST00000357632 ZNF646O15015 1829 aaPredicted RBP12.15□□□□□ -0.47
CCR9-202ENST00000357632 MYO3BQ8WXR4 1341 aa12.15□□□□□ -0.47
CCR9-202ENST00000357632 ECM29Q5VYK3 1845 aa12.14□□□□□ -0.47
CCR9-202ENST00000357632 GOLGA8AA7E2F4 631 aa12.14□□□□□ -0.47
CCR9-202ENST00000357632 JAK2O60674 1132 aa12.14□□□□□ -0.47
CCR9-202ENST00000357632 DDAH1O94760 285 aa12.14□□□□□ -0.47
CCR9-202ENST00000357632 SEC23AQ15436 765 aa12.14□□□□□ -0.47
CCR9-202ENST00000357632 TEX11Q8IYF3 940 aa12.14□□□□□ -0.47
CCR9-202ENST00000357632 SH3RF3Q8TEJ3 882 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms