RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 KRT40Q6A162 431 aa9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 SHC4Q6S5L8 630 aa9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 WDR24Q96S15 920 aa9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 INCENPQ9NQS7 918 aa9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 HPS5Q9UPZ3 1129 aa9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 PCDHA5Q9Y5H7 936 aa9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 EIF3CLB5ME19 914 aaKnown RBP9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 FANCGO15287 622 aa9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 ZSCAN12O43309 604 aa9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 ATP8B1O43520 1251 aa9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 CCDC93Q567U6 631 aa9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 RRP12Q5JTH9 1297 aaKnown RBP9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 CCDC102BQ68D86 513 aa9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 KLHL10Q6JEL2 608 aa9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 CPLX2Q6PUV4 134 aaKnown RBP9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 JMYQ8N9B5 988 aa9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 IQUBQ8NA54 791 aa9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 XAGE2Q96GT9 111 aa9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 EIF3CQ99613 913 aaKnown RBP9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 BAG1Q99933 345 aaPredicted RBP9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 IRX2Q9BZI1 471 aaPredicted RBP9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 LZTFL1Q9NQ48 299 aa9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 PPP2R2CQ9Y2T4 447 aa9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 SLIT1O75093 1534 aa9.41□□□□□ -0.9
CDC42SE1-201ENST00000357235 B4E1Z4 1266 aa9.41□□□□□ -0.9
CDC42SE1-201ENST00000357235 ANTXR2P58335 489 aa9.41□□□□□ -0.9
CDC42SE1-201ENST00000357235 SLC39A14Q15043 492 aa9.41□□□□□ -0.9
CDC42SE1-201ENST00000357235 GRAMD1CQ8IYS0 662 aa9.41□□□□□ -0.9
CDC42SE1-201ENST00000357235 CCDC12Q8WUD4 166 aaPredicted RBP9.41□□□□□ -0.9
CDC42SE1-201ENST00000357235 FAM212AQ96EL1 285 aa9.41□□□□□ -0.9
CDC42SE1-201ENST00000357235 SLC26A6Q9BXS9 759 aa9.41□□□□□ -0.9
CDC42SE1-201ENST00000357235 SENP2Q9HC62 589 aa9.41□□□□□ -0.9
CDC42SE1-201ENST00000357235 PSD3Q9NYI0 1048 aa9.41□□□□□ -0.9
CDC42SE1-201ENST00000357235 NEDD4P46934 1319 aa9.41□□□□□ -0.9
CDC42SE1-201ENST00000357235 CDC27P30260 824 aa9.41□□□□□ -0.9
CDC42SE1-201ENST00000357235 LRRFIP1Q32MZ4 808 aaKnown RBP9.41□□□□□ -0.9
CDC42SE1-201ENST00000357235 NBPF20Q3BBV1 942 aa9.41□□□□□ -0.9
CDC42SE1-201ENST00000357235 MMS22LQ6ZRQ5 1243 aa9.41□□□□□ -0.9
CDC42SE1-201ENST00000357235 TOGARAM2Q6ZUX3 1019 aa9.41□□□□□ -0.9
CDC42SE1-201ENST00000357235 CMTR1Q8N1G2 835 aaKnown RBP9.41□□□□□ -0.9
CDC42SE1-201ENST00000357235 FAM89AQ96GI7 184 aa9.41□□□□□ -0.9
CDC42SE1-201ENST00000357235 CEP89Q96ST8 783 aa9.41□□□□□ -0.9
CDC42SE1-201ENST00000357235 ADAM21Q9UKJ8 722 aa9.41□□□□□ -0.9
CDC42SE1-201ENST00000357235 KCNH3Q9ULD8 1083 aa9.41□□□□□ -0.9
CDC42SE1-201ENST00000357235 RGPD2P0DJD1 1756 aa9.41□□□□□ -0.9
CDC42SE1-201ENST00000357235 ZNF335Q9H4Z2 1342 aaPredicted RBP9.41□□□□□ -0.9
CDC42SE1-201ENST00000357235 LTN1O94822 1766 aa9.4□□□□□ -0.9
CDC42SE1-201ENST00000357235 N4BP2Q86UW6 1770 aaPredicted RBP9.4□□□□□ -0.9
CDC42SE1-201ENST00000357235 PALLDQ8WX93 1383 aa9.4□□□□□ -0.9
CDC42SE1-201ENST00000357235 CYP27B1O15528 508 aa9.4□□□□□ -0.9
CDC42SE1-201ENST00000357235 PDE4BQ07343 736 aa9.4□□□□□ -0.9
CDC42SE1-201ENST00000357235 SLC9C2Q5TAH2 1124 aa9.4□□□□□ -0.9
CDC42SE1-201ENST00000357235 TRIM65Q6PJ69 517 aa9.4□□□□□ -0.9
CDC42SE1-201ENST00000357235 REXO1L1PQ8IX06 675 aa9.4□□□□□ -0.9
CDC42SE1-201ENST00000357235 BPIFA3Q9BQP9 254 aa9.4□□□□□ -0.9
CDC42SE1-201ENST00000357235 HSD3B7Q9H2F3 369 aa9.4□□□□□ -0.9
CDC42SE1-201ENST00000357235 PUF60Q9UHX1 559 aaKnown RBP9.4□□□□□ -0.9
CDC42SE1-201ENST00000357235 NFE2L3Q9Y4A8 694 aa9.4□□□□□ -0.9
CDC42SE1-201ENST00000357235 PARP3Q9Y6F1 533 aa9.4□□□□□ -0.9
CDC42SE1-201ENST00000357235 MED1Q15648 1581 aaPredicted RBP9.4□□□□□ -0.9
CDC42SE1-201ENST00000357235 CHD2O14647 1828 aaKnown RBP9.4□□□□□ -0.9
CDC42SE1-201ENST00000357235 NBPF26B4DH59 902 aa9.4□□□□□ -0.9
CDC42SE1-201ENST00000357235 IARSP41252 1262 aaKnown RBP9.4□□□□□ -0.9
CDC42SE1-201ENST00000357235 MAP2K1Q02750 393 aaPredicted RBP9.4□□□□□ -0.9
CDC42SE1-201ENST00000357235 PPP2R3AQ06190 1150 aa9.4□□□□□ -0.9
CDC42SE1-201ENST00000357235 NBPF14Q5TI25 921 aa9.4□□□□□ -0.9
CDC42SE1-201ENST00000357235 NBPF10Q6P3W6 841 aaKnown RBP9.4□□□□□ -0.9
CDC42SE1-201ENST00000357235 VSTM4Q8IW00 320 aa9.4□□□□□ -0.9
CDC42SE1-201ENST00000357235 MB21D2Q8IYB1 491 aaPredicted RBP9.4□□□□□ -0.9
CDC42SE1-201ENST00000357235 NBPF15Q8N660 670 aa9.4□□□□□ -0.9
CDC42SE1-201ENST00000357235 NKX2-3Q8TAU0 364 aa9.4□□□□□ -0.9
CDC42SE1-201ENST00000357235 RNF217Q8TC41 542 aa9.4□□□□□ -0.9
CDC42SE1-201ENST00000357235 UBXN6Q9BZV1 441 aa9.4□□□□□ -0.9
CDC42SE1-201ENST00000357235 CCDC196A0A1B0GTZ2 297 aa9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 VWA3AA6NCI4 1184 aa9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 IKBKBO14920 756 aa9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 POLR2DO15514 142 aaKnown RBP9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 TADA3O75528 432 aa9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 CASP7P55210 303 aa9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 STX17P56962 302 aa9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 MCM6Q14566 821 aa9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 MTF1Q14872 753 aa9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 LRCH2Q5VUJ6 765 aa9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 LRP10Q7Z4F1 713 aa9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 METTL16Q86W50 562 aaKnown RBP9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 FOXP4Q8IVH2 680 aaPredicted RBP9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 ZKSCAN3Q9BRR0 538 aa9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 ANGEL1Q9UNK9 670 aaKnown RBP9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 KCNJ14Q9UNX9 436 aa9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 KDM3BQ7LBC6 1761 aa9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 PHLPP2Q6ZVD8 1323 aa9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 RFX7Q2KHR2 1363 aa9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 GOLGA8AA7E2F4 631 aa9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 EFCAB8A8MWE9 144 aa9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 FOXP2O15409 715 aa9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 ARHGAP6O43182 974 aa9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 METTL24Q5JXM2 366 aa9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 APPBP2Q92624 585 aa9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 DCAF5Q96JK2 942 aa9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 ARFGAP3Q9NP61 516 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms