RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 CCT5P48643 541 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 RASSF2P50749 326 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 TAF7Q15545 349 aaPredicted RBP7.39□□□□□ -1.23
TRIM38-201ENST00000357085 VCX3BQ9H321 246 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 ZSWIM6Q9HCJ5 1215 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 LARSQ9P2J5 1176 aaKnown RBP7.39□□□□□ -1.23
TRIM38-201ENST00000357085 FAM208AQ9UK61 1670 aaKnown RBP7.39□□□□□ -1.23
TRIM38-201ENST00000357085 ST5P78524 1137 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 NBPF10Q6P3W6 841 aaKnown RBP7.39□□□□□ -1.23
TRIM38-201ENST00000357085 IQCA1Q86XH1 822 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 ATRIPQ8WXE1 791 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 KIAA1468Q9P260 1216 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 MMP14P50281 582 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 RCAN1P53805 252 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 SWT1Q5T5J6 900 aaKnown RBP7.39□□□□□ -1.23
TRIM38-201ENST00000357085 CDC37L1Q7L3B6 337 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 VSTM4Q8IW00 320 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 RNF168Q8IYW5 571 aaPredicted RBP7.39□□□□□ -1.23
TRIM38-201ENST00000357085 JAKMIP2Q96AA8 810 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 RAB3IPQ96QF0 476 aaPredicted RBP7.39□□□□□ -1.23
TRIM38-201ENST00000357085 LARP6Q9BRS8 491 aaKnown RBP7.39□□□□□ -1.23
TRIM38-201ENST00000357085 ABCC12Q96J65 1359 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 USP27XA6NNY8 438 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 RTEL1Q9NZ71 1219 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 WWC3Q9ULE0 1092 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 ENOX2Q16206 610 aaKnown RBP7.39□□□□□ -1.23
TRIM38-201ENST00000357085 ZNF569Q5MCW4 686 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 CASZ1Q86V15 1759 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 MYH8P13535 1937 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 BIRC3Q13489 604 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 VWA3BQ502W6 1294 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 RBM26Q5T8P6 1007 aaKnown RBP7.38□□□□□ -1.23
TRIM38-201ENST00000357085 CREB3L3Q68CJ9 461 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 SELENOOQ9BVL4 669 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 SIL1Q9H173 461 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 HMGB1P1B2RPK0 211 aaPredicted RBP7.38□□□□□ -1.23
TRIM38-201ENST00000357085 ZEB2O60315 1214 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 SLC8A3P57103 927 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 TTC39AQ5SRH9 613 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 MAATS1Q7Z4T9 603 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 TRIM7Q9C029 511 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 KIF5AQ12840 1032 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 TEX11Q8IYF3 940 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 FERMT2Q96AC1 680 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 USP42Q9H9J4 1324 aaKnown RBP7.38□□□□□ -1.23
TRIM38-201ENST00000357085 BSDC1Q9NW68 430 aaPredicted RBP7.38□□□□□ -1.23
TRIM38-201ENST00000357085 PFKFB2O60825 505 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 GNGT1P63211 74 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 NECAB1Q8N987 351 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 NBPF3Q9H094 633 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 KARSQ15046 597 aaKnown RBP7.38□□□□□ -1.23
TRIM38-201ENST00000357085 PRAM1Q96QH2 718 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 IL1RAPL2Q9NP60 686 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 ADGRF5Q8IZF2 1346 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 A0A087WZG4 1122 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 CMA1P23946 247 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 NCOA7Q8NI08 942 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 TSG101Q99816 390 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 MON2Q7Z3U7 1717 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 NR1I2O75469 434 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 ELF1P32519 619 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 CCDC84Q86UT8 332 aaPredicted RBP7.38□□□□□ -1.23
TRIM38-201ENST00000357085 GFM2Q969S9 779 aaKnown RBP7.38□□□□□ -1.23
TRIM38-201ENST00000357085 RUNDC3BQ96NL0 473 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 GGA2Q9UJY4 613 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 PALD1Q9ULE6 856 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 SNX14Q9Y5W7 946 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 KDRP35968 1356 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 CUL1Q13616 776 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 PACS2Q86VP3 889 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 SSH3Q8TE77 659 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 TBC1D22AQ8WUA7 517 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 JADE2Q9NQC1 790 aa7.38□□□□□ -1.23
TRIM38-201ENST00000357085 PLA2G4AP47712 749 aa7.37□□□□□ -1.23
TRIM38-201ENST00000357085 CCDC144BQ3MJ40 725 aa7.37□□□□□ -1.23
TRIM38-201ENST00000357085 CCDC144CPQ8IYA2 1237 aa7.37□□□□□ -1.23
TRIM38-201ENST00000357085 LUC7L2Q9Y383 392 aaKnown RBP7.37□□□□□ -1.23
TRIM38-201ENST00000357085 TAOK1Q7L7X3 1001 aa7.37□□□□□ -1.23
TRIM38-201ENST00000357085 ARHGAP24Q8N264 748 aa7.37□□□□□ -1.23
TRIM38-201ENST00000357085 BCAS4Q8TDM0 211 aa7.37□□□□□ -1.23
TRIM38-201ENST00000357085 PSMD1Q99460 953 aa7.37□□□□□ -1.23
TRIM38-201ENST00000357085 FAM184BQ9ULE4 1060 aa7.37□□□□□ -1.23
TRIM38-201ENST00000357085 DYNC1I2Q13409 638 aaKnown RBP7.37□□□□□ -1.23
TRIM38-201ENST00000357085 YTHDF3Q7Z739 585 aaKnown RBP7.37□□□□□ -1.23
TRIM38-201ENST00000357085 FAM169AQ9Y6X4 670 aa7.37□□□□□ -1.23
TRIM38-201ENST00000357085 SETDB1Q15047 1291 aa7.37□□□□□ -1.23
TRIM38-201ENST00000357085 TSGA10IPQ3SY00 556 aa7.37□□□□□ -1.23
TRIM38-201ENST00000357085 GGT6Q6P531 493 aa7.37□□□□□ -1.23
TRIM38-201ENST00000357085 ZNF274Q96GC6 653 aaPredicted RBP7.37□□□□□ -1.23
TRIM38-201ENST00000357085 THUMPD2Q9BTF0 503 aaKnown RBP7.37□□□□□ -1.23
TRIM38-201ENST00000357085 KRT23Q9C075 422 aa7.37□□□□□ -1.23
TRIM38-201ENST00000357085 CHRM1P11229 460 aaPredicted RBP7.37□□□□□ -1.23
TRIM38-201ENST00000357085 TRIM21P19474 475 aaKnown RBP7.37□□□□□ -1.23
TRIM38-201ENST00000357085 RNASELQ05823 741 aaKnown RBP7.37□□□□□ -1.23
TRIM38-201ENST00000357085 SIRT1Q96EB6 747 aa7.37□□□□□ -1.23
TRIM38-201ENST00000357085 SAR1BQ9Y6B6 198 aa7.37□□□□□ -1.23
TRIM38-201ENST00000357085 CASP8Q14790 479 aa7.37□□□□□ -1.23
TRIM38-201ENST00000357085 TTC6Q86TZ1 520 aa7.37□□□□□ -1.23
TRIM38-201ENST00000357085 RPUSD2Q8IZ73 545 aaKnown RBP7.37□□□□□ -1.23
TRIM38-201ENST00000357085 SOX12O15370 315 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms