RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 HACE1Q8IYU2 909 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 JARID2Q92833 1246 aaPredicted RBP7.22□□□□□ -1.25
UPF2-201ENST00000356352 PPP1R9BQ96SB3 815 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 VCXQ9H320 206 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 VPS18Q9P253 973 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 NSFL1CQ9UNZ2 370 aaKnown RBP7.22□□□□□ -1.25
UPF2-201ENST00000356352 CTNND2Q9UQB3 1225 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 GBP1P32455 592 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 TFCP2Q12800 502 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 FCHSD1Q86WN1 690 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 NAPGQ99747 312 aaPredicted RBP7.22□□□□□ -1.25
UPF2-201ENST00000356352 IFNKQ9P0W0 207 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 ABCC1P33527 1531 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 P4HA1P13674 534 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 CLCN1P35523 988 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 PDE4DQ08499 809 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 PUM3Q15397 648 aaKnown RBP7.22□□□□□ -1.25
UPF2-201ENST00000356352 MCTP2Q6DN12 878 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 KRT25Q7Z3Z0 450 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 NUCKS1Q9H1E3 243 aaKnown RBP7.22□□□□□ -1.25
UPF2-201ENST00000356352 DCTPP1Q9H773 170 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 PLCB1Q9NQ66 1216 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 M0QZ92 97 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 CASQ2O14958 399 aaPredicted RBP7.22□□□□□ -1.25
UPF2-201ENST00000356352 CETN3O15182 167 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 ZBED4O75132 1171 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 PPFIA3O75145 1194 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 DNM2P50570 870 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 TTC31Q49AM3 519 aaPredicted RBP7.22□□□□□ -1.25
UPF2-201ENST00000356352 HSP90AA4PQ58FG1 418 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 IFT20Q8IY31 132 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 MIGA1Q8NAN2 632 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.22□□□□□ -1.25
UPF2-201ENST00000356352 LZTFL1Q9NQ48 299 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 BCAP29Q9UHQ4 241 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 IVNS1ABPQ9Y6Y0 642 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 ARHGEF35A5YM69 484 aa7.21□□□□□ -1.25
UPF2-201ENST00000356352 GOLGA6CA6NDK9 693 aa7.21□□□□□ -1.25
UPF2-201ENST00000356352 GOLGA6BA6NDN3 693 aa7.21□□□□□ -1.25
UPF2-201ENST00000356352 GOLGA6DP0CG33 693 aa7.21□□□□□ -1.25
UPF2-201ENST00000356352 NEDD9Q14511 834 aa7.21□□□□□ -1.25
UPF2-201ENST00000356352 LETM2Q2VYF4 491 aa7.21□□□□□ -1.25
UPF2-201ENST00000356352 SMC5Q8IY18 1101 aa7.21□□□□□ -1.25
UPF2-201ENST00000356352 CNBD1Q8NA66 436 aa7.21□□□□□ -1.25
UPF2-201ENST00000356352 TRERF1Q96PN7 1200 aa7.21□□□□□ -1.25
UPF2-201ENST00000356352 GOLGA6AQ9NYA3 693 aa7.21□□□□□ -1.25
UPF2-201ENST00000356352 BIN2Q9UBW5 565 aaPredicted RBP7.21□□□□□ -1.25
UPF2-201ENST00000356352 TACC3Q9Y6A5 838 aa7.21□□□□□ -1.25
UPF2-201ENST00000356352 YTHDC2Q9H6S0 1430 aaKnown RBP7.21□□□□□ -1.26
UPF2-201ENST00000356352 TLDC2A0PJX2 215 aa7.21□□□□□ -1.26
UPF2-201ENST00000356352 SMIM23A6NLE4 172 aa7.21□□□□□ -1.26
UPF2-201ENST00000356352 CCDC169A6NNP5 214 aa7.21□□□□□ -1.26
UPF2-201ENST00000356352 UBAP1LF5GYI3 381 aa7.21□□□□□ -1.26
UPF2-201ENST00000356352 NOP56O00567 594 aaKnown RBP7.21□□□□□ -1.26
UPF2-201ENST00000356352 ANXA1P04083 346 aa7.21□□□□□ -1.26
UPF2-201ENST00000356352 MTMR3Q13615 1198 aa7.21□□□□□ -1.26
UPF2-201ENST00000356352 EIF4A2Q14240 407 aaKnown RBP7.21□□□□□ -1.26
UPF2-201ENST00000356352 RAB3GAP1Q15042 981 aa7.21□□□□□ -1.26
UPF2-201ENST00000356352 CEP85LQ5SZL2 805 aa7.21□□□□□ -1.26
UPF2-201ENST00000356352 C8orf74Q6P047 294 aa7.21□□□□□ -1.26
UPF2-201ENST00000356352 CEP85Q6P2H3 762 aa7.21□□□□□ -1.26
UPF2-201ENST00000356352 AZI2Q9H6S1 392 aa7.21□□□□□ -1.26
UPF2-201ENST00000356352 SBNO2Q9Y2G9 1366 aa7.21□□□□□ -1.26
UPF2-201ENST00000356352 NPATQ14207 1427 aa7.21□□□□□ -1.26
UPF2-201ENST00000356352 VWA3AA6NCI4 1184 aa7.21□□□□□ -1.26
UPF2-201ENST00000356352 MBD4O95243 580 aa7.21□□□□□ -1.26
UPF2-201ENST00000356352 STX17P56962 302 aa7.21□□□□□ -1.26
UPF2-201ENST00000356352 KARSQ15046 597 aaKnown RBP7.21□□□□□ -1.26
UPF2-201ENST00000356352 KMT5BQ4FZB7 885 aa7.21□□□□□ -1.26
UPF2-201ENST00000356352 PPP1R21Q6ZMI0 780 aa7.21□□□□□ -1.26
UPF2-201ENST00000356352 ZMYND15Q9H091 742 aa7.21□□□□□ -1.26
UPF2-201ENST00000356352 STK32BQ9NY57 414 aa7.21□□□□□ -1.26
UPF2-201ENST00000356352 CUTAO60888 179 aa7.21□□□□□ -1.26
UPF2-201ENST00000356352 BCRP11274 1271 aa7.21□□□□□ -1.26
UPF2-201ENST00000356352 HIBADHP31937 336 aaKnown RBP7.21□□□□□ -1.26
UPF2-201ENST00000356352 CEBPAP49715 358 aaPredicted RBP7.21□□□□□ -1.26
UPF2-201ENST00000356352 SH2D4BQ5SQS7 431 aa7.21□□□□□ -1.26
UPF2-201ENST00000356352 AKNAD1Q5T1N1 836 aa7.21□□□□□ -1.26
UPF2-201ENST00000356352 RUFY4Q6ZNE9 571 aa7.21□□□□□ -1.26
UPF2-201ENST00000356352 LMNTD2Q8IXW0 634 aa7.21□□□□□ -1.26
UPF2-201ENST00000356352 C8orf37Q96NL8 207 aa7.21□□□□□ -1.26
UPF2-201ENST00000356352 NCAPGQ9BPX3 1015 aa7.21□□□□□ -1.26
UPF2-201ENST00000356352 TRIM6Q9C030 488 aaPredicted RBP7.21□□□□□ -1.26
UPF2-201ENST00000356352 PARP2Q9UGN5 583 aa7.21□□□□□ -1.26
UPF2-201ENST00000356352 GNA14O95837 355 aa7.2□□□□□ -1.26
UPF2-201ENST00000356352 RPS6KB1P23443 525 aa7.2□□□□□ -1.26
UPF2-201ENST00000356352 ADCY7P51828 1080 aa7.2□□□□□ -1.26
UPF2-201ENST00000356352 TBC1D8BQ0IIM8 1120 aa7.2□□□□□ -1.26
UPF2-201ENST00000356352 GRM1Q13255 1194 aa7.2□□□□□ -1.26
UPF2-201ENST00000356352 SLC39A6Q13433 755 aa7.2□□□□□ -1.26
UPF2-201ENST00000356352 CUL4BQ13620 913 aa7.2□□□□□ -1.26
UPF2-201ENST00000356352 UAP1Q16222 522 aaPredicted RBP7.2□□□□□ -1.26
UPF2-201ENST00000356352 SLC9C1Q4G0N8 1177 aa7.2□□□□□ -1.26
UPF2-201ENST00000356352 GSDMBQ8TAX9 411 aa7.2□□□□□ -1.26
UPF2-201ENST00000356352 GGA1Q9UJY5 639 aa7.2□□□□□ -1.26
UPF2-201ENST00000356352 SYNRGQ9UMZ2 1314 aa7.2□□□□□ -1.26
UPF2-201ENST00000356352 I3L4J1 428 aa7.2□□□□□ -1.26
UPF2-201ENST00000356352 KIF3CO14782 793 aa7.2□□□□□ -1.26
UPF2-201ENST00000356352 RIMBP2O15034 1052 aa7.2□□□□□ -1.26
UPF2-201ENST00000356352 ZBTB24O43167 697 aaPredicted RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms