RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 ARHGEF10LQ9HCE6 1279 aa19.24■□□□□ 0.67
COL27A1-201ENST00000356083 FGD5Q6ZNL6 1462 aa19.23■□□□□ 0.67
COL27A1-201ENST00000356083 MCUR1Q96AQ8 359 aa19.23■□□□□ 0.67
COL27A1-201ENST00000356083 CD19P15391 556 aa19.23■□□□□ 0.67
COL27A1-201ENST00000356083 SESTD1Q86VW0 696 aa19.23■□□□□ 0.67
COL27A1-201ENST00000356083 SUDS3Q9H7L9 328 aaPredicted RBP19.23■□□□□ 0.67
COL27A1-201ENST00000356083 CAPN9O14815 690 aa19.23■□□□□ 0.67
COL27A1-201ENST00000356083 ZNF365Q70YC5 407 aa19.23■□□□□ 0.67
COL27A1-201ENST00000356083 GBP6Q6ZN66 633 aa19.23■□□□□ 0.67
COL27A1-201ENST00000356083 SCYL1Q96KG9 808 aa19.23■□□□□ 0.67
COL27A1-201ENST00000356083 DNAJC25Q9H1X3 360 aa19.23■□□□□ 0.67
COL27A1-201ENST00000356083 ACBD5Q5T8D3 534 aaPredicted RBP19.23■□□□□ 0.67
COL27A1-201ENST00000356083 PSMB7Q99436 277 aa19.23■□□□□ 0.67
COL27A1-201ENST00000356083 MYO1AQ9UBC5 1043 aa19.23■□□□□ 0.67
COL27A1-201ENST00000356083 PPFIA2O75334 1257 aa19.23■□□□□ 0.67
COL27A1-201ENST00000356083 ZNF174Q15697 407 aa19.23■□□□□ 0.67
COL27A1-201ENST00000356083 RILPL1Q5EBL4 403 aa19.22■□□□□ 0.67
COL27A1-201ENST00000356083 TBC1D9Q6ZT07 1266 aa19.22■□□□□ 0.67
COL27A1-201ENST00000356083 PLEKHA4Q9H4M7 779 aa19.22■□□□□ 0.67
COL27A1-201ENST00000356083 AZI2Q9H6S1 392 aa19.22■□□□□ 0.67
COL27A1-201ENST00000356083 SYNJ2BP-COX16A0A087WUM0 186 aa19.22■□□□□ 0.67
COL27A1-201ENST00000356083 RPL13P26373 211 aaKnown RBP19.22■□□□□ 0.67
COL27A1-201ENST00000356083 MCMDC2Q4G0Z9 681 aa19.22■□□□□ 0.67
COL27A1-201ENST00000356083 COX16Q9P0S2 106 aa19.22■□□□□ 0.67
COL27A1-201ENST00000356083 SCYL2Q6P3W7 929 aa19.22■□□□□ 0.67
COL27A1-201ENST00000356083 NBPF3Q9H094 633 aa19.22■□□□□ 0.67
COL27A1-201ENST00000356083 SLC12A1Q13621 1099 aa19.22■□□□□ 0.67
COL27A1-201ENST00000356083 RDH13Q8NBN7 331 aa19.22■□□□□ 0.67
COL27A1-201ENST00000356083 GCNT3O95395 438 aa19.22■□□□□ 0.67
COL27A1-201ENST00000356083 SPDYE1Q8NFV5 336 aaPredicted RBP19.22■□□□□ 0.67
COL27A1-201ENST00000356083 ARHGEF35A5YM69 484 aa19.21■□□□□ 0.67
COL27A1-201ENST00000356083 MAP7Q14244 749 aa19.21■□□□□ 0.67
COL27A1-201ENST00000356083 XAGE3Q8WTP9 111 aa19.21■□□□□ 0.67
COL27A1-201ENST00000356083 COPS6Q7L5N1 327 aa19.21■□□□□ 0.67
COL27A1-201ENST00000356083 CACNA2D3Q8IZS8 1091 aa19.21■□□□□ 0.67
COL27A1-201ENST00000356083 ASIC3Q9UHC3 531 aa19.21■□□□□ 0.67
COL27A1-201ENST00000356083 LIN9Q5TKA1 542 aa19.21■□□□□ 0.67
COL27A1-201ENST00000356083 PDZD8Q8NEN9 1154 aa19.21■□□□□ 0.67
COL27A1-201ENST00000356083 IVLP07476 585 aa19.21■□□□□ 0.67
COL27A1-201ENST00000356083 DNM2P50570 870 aa19.21■□□□□ 0.67
COL27A1-201ENST00000356083 PRG4Q92954 1404 aaPredicted RBP19.21■□□□□ 0.67
COL27A1-201ENST00000356083 RTL1A6NKG5 1358 aa19.21■□□□□ 0.67
COL27A1-201ENST00000356083 BEND3Q5T5X7 828 aa19.21■□□□□ 0.67
COL27A1-201ENST00000356083 ATP5DP30049 168 aa19.2■□□□□ 0.66
COL27A1-201ENST00000356083 C20orf194Q5TEA3 1177 aa19.2■□□□□ 0.66
COL27A1-201ENST00000356083 NCAPH2Q6IBW4 605 aa19.2■□□□□ 0.66
COL27A1-201ENST00000356083 SV2BQ7L1I2 683 aa19.2■□□□□ 0.66
COL27A1-201ENST00000356083 MMS19Q96T76 1030 aa19.2■□□□□ 0.66
COL27A1-201ENST00000356083 TSGA10Q9BZW7 698 aa19.2■□□□□ 0.66
COL27A1-201ENST00000356083 BMP15O95972 392 aa19.2■□□□□ 0.66
COL27A1-201ENST00000356083 HACE1Q8IYU2 909 aa19.2■□□□□ 0.66
COL27A1-201ENST00000356083 TTC31Q49AM3 519 aaPredicted RBP19.2■□□□□ 0.66
COL27A1-201ENST00000356083 C10orf67Q8IYJ2 551 aa19.2■□□□□ 0.66
COL27A1-201ENST00000356083 VPS16Q9H269 839 aa19.2■□□□□ 0.66
COL27A1-201ENST00000356083 HMG20BQ9P0W2 317 aa19.2■□□□□ 0.66
COL27A1-201ENST00000356083 MAGED2Q9UNF1 606 aaPredicted RBP19.2■□□□□ 0.66
COL27A1-201ENST00000356083 ATAD2Q6PL18 1390 aa19.2■□□□□ 0.66
COL27A1-201ENST00000356083 PLCG2P16885 1265 aa19.2■□□□□ 0.66
COL27A1-201ENST00000356083 XAB2Q9HCS7 855 aaKnown RBP19.2■□□□□ 0.66
COL27A1-201ENST00000356083 GNPATO15228 680 aa19.19■□□□□ 0.66
COL27A1-201ENST00000356083 PDE6AP16499 860 aa19.19■□□□□ 0.66
COL27A1-201ENST00000356083 NR1I2O75469 434 aa19.19■□□□□ 0.66
COL27A1-201ENST00000356083 TEX11Q8IYF3 940 aa19.19■□□□□ 0.66
COL27A1-201ENST00000356083 NOX5Q96PH1 765 aa19.19■□□□□ 0.66
COL27A1-201ENST00000356083 YARSP54577 528 aaKnown RBP19.19■□□□□ 0.66
COL27A1-201ENST00000356083 IRX3P78415 501 aaPredicted RBP19.19■□□□□ 0.66
COL27A1-201ENST00000356083 I3L4J1 428 aa19.19■□□□□ 0.66
COL27A1-201ENST00000356083 KRT33BQ14525 404 aa19.19■□□□□ 0.66
COL27A1-201ENST00000356083 RSRC1Q96IZ7 334 aaKnown RBP19.19■□□□□ 0.66
COL27A1-201ENST00000356083 NOC4LQ9BVI4 516 aaKnown RBP19.19■□□□□ 0.66
COL27A1-201ENST00000356083 GBP1P32455 592 aa19.19■□□□□ 0.66
COL27A1-201ENST00000356083 KRT81Q14533 505 aa19.19■□□□□ 0.66
COL27A1-201ENST00000356083 KRT222Q8N1A0 295 aa19.19■□□□□ 0.66
COL27A1-201ENST00000356083 TNNI1P19237 187 aa19.18■□□□□ 0.66
COL27A1-201ENST00000356083 APOBRQ0VD83 1088 aa19.18■□□□□ 0.66
COL27A1-201ENST00000356083 Q3C1V9 767 aa19.18■□□□□ 0.66
COL27A1-201ENST00000356083 NUCKS1Q9H1E3 243 aaKnown RBP19.18■□□□□ 0.66
COL27A1-201ENST00000356083 PAG1Q9NWQ8 432 aa19.18■□□□□ 0.66
COL27A1-201ENST00000356083 RBM8AQ9Y5S9 174 aaKnown RBP19.18■□□□□ 0.66
COL27A1-201ENST00000356083 TRIM56Q9BRZ2 755 aaKnown RBP19.18■□□□□ 0.66
COL27A1-201ENST00000356083 SUFUQ9UMX1 484 aa19.18■□□□□ 0.66
COL27A1-201ENST00000356083 CFTRP13569 1480 aa19.18■□□□□ 0.66
COL27A1-201ENST00000356083 TNNC1P63316 161 aa19.18■□□□□ 0.66
COL27A1-201ENST00000356083 KIF21BO75037 1637 aa19.18■□□□□ 0.66
COL27A1-201ENST00000356083 DNM1Q05193 864 aaKnown RBP19.18■□□□□ 0.66
COL27A1-201ENST00000356083 MYCT1Q8N699 235 aa19.18■□□□□ 0.66
COL27A1-201ENST00000356083 ATP2A3Q93084 1043 aa19.18■□□□□ 0.66
COL27A1-201ENST00000356083 RMDN2Q96LZ7 410 aa19.18■□□□□ 0.66
COL27A1-201ENST00000356083 DTNBO60941 627 aa19.18■□□□□ 0.66
COL27A1-201ENST00000356083 UBL4BQ8N7F7 174 aa19.18■□□□□ 0.66
COL27A1-201ENST00000356083 ZNF653Q96CK0 615 aa19.18■□□□□ 0.66
COL27A1-201ENST00000356083 LUC7L2Q9Y383 392 aaKnown RBP19.18■□□□□ 0.66
COL27A1-201ENST00000356083 PTPRCP08575 1304 aa19.17■□□□□ 0.66
COL27A1-201ENST00000356083 SPECC1L-ADORA2AF8WAN1 911 aa19.17■□□□□ 0.66
COL27A1-201ENST00000356083 IGSF3O75054 1194 aa19.17■□□□□ 0.66
COL27A1-201ENST00000356083 XPAP23025 273 aaPredicted RBP19.17■□□□□ 0.66
COL27A1-201ENST00000356083 ZSCAN23Q3MJ62 389 aa19.17■□□□□ 0.66
COL27A1-201ENST00000356083 GADL1Q6ZQY3 521 aa19.17■□□□□ 0.66
COL27A1-201ENST00000356083 MRPL44Q9H9J2 332 aaKnown RBP19.17■□□□□ 0.66
COL27A1-201ENST00000356083 IFNKQ9P0W0 207 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms