RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 SERTAD1Q9UHV2 236 aa13.96□□□□□ -0.17
SIRPA-201ENST00000356025 RGPD2P0DJD1 1756 aa13.96□□□□□ -0.17
SIRPA-201ENST00000356025 VWA3AA6NCI4 1184 aa13.96□□□□□ -0.17
SIRPA-201ENST00000356025 CATIPQ7Z7H3 387 aa13.96□□□□□ -0.17
SIRPA-201ENST00000356025 SMYD4Q8IYR2 804 aaPredicted RBP13.96□□□□□ -0.17
SIRPA-201ENST00000356025 CCDC87Q9NVE4 849 aa13.96□□□□□ -0.17
SIRPA-201ENST00000356025 RTEL1Q9NZ71 1219 aa13.96□□□□□ -0.17
SIRPA-201ENST00000356025 PATL2C9JE40 543 aaKnown RBP13.96□□□□□ -0.18
SIRPA-201ENST00000356025 ERCC3P19447 782 aa13.96□□□□□ -0.18
SIRPA-201ENST00000356025 MCM7P33993 719 aa13.96□□□□□ -0.18
SIRPA-201ENST00000356025 STRBPQ96SI9 672 aaKnown RBP13.96□□□□□ -0.18
SIRPA-201ENST00000356025 MKNK2Q9HBH9 465 aa13.96□□□□□ -0.18
SIRPA-201ENST00000356025 PCDHA5Q9Y5H7 936 aa13.96□□□□□ -0.18
SIRPA-201ENST00000356025 CYP19A1P11511 503 aaPredicted RBP13.95□□□□□ -0.18
SIRPA-201ENST00000356025 ADKP55263 362 aaKnown RBP13.95□□□□□ -0.18
SIRPA-201ENST00000356025 LONRF3Q496Y0 759 aa13.95□□□□□ -0.18
SIRPA-201ENST00000356025 CDC5LQ99459 802 aaKnown RBP13.95□□□□□ -0.18
SIRPA-201ENST00000356025 KRT23Q9C075 422 aa13.95□□□□□ -0.18
SIRPA-201ENST00000356025 USP17L12C9JPN9 530 aa13.95□□□□□ -0.18
SIRPA-201ENST00000356025 USP17L21D6R901 530 aa13.95□□□□□ -0.18
SIRPA-201ENST00000356025 CTCFLQ8NI51 663 aaPredicted RBP13.95□□□□□ -0.18
SIRPA-201ENST00000356025 ESR2Q92731 530 aa13.95□□□□□ -0.18
SIRPA-201ENST00000356025 GPR101Q96P66 508 aaPredicted RBP13.95□□□□□ -0.18
SIRPA-201ENST00000356025 ZNF215Q9UL58 517 aaPredicted RBP13.95□□□□□ -0.18
SIRPA-201ENST00000356025 KIF13AQ9H1H9 1805 aa13.95□□□□□ -0.18
SIRPA-201ENST00000356025 F8W031 263 aaPredicted RBP13.95□□□□□ -0.18
SIRPA-201ENST00000356025 G3V3G9 751 aa13.95□□□□□ -0.18
SIRPA-201ENST00000356025 ZPR1O75312 459 aa13.95□□□□□ -0.18
SIRPA-201ENST00000356025 DCAF8Q5TAQ9 597 aa13.95□□□□□ -0.18
SIRPA-201ENST00000356025 WASF1Q92558 559 aa13.95□□□□□ -0.18
SIRPA-201ENST00000356025 LTN1O94822 1766 aa13.94□□□□□ -0.18
SIRPA-201ENST00000356025 LOC102724428A0A0B4J2F2 783 aa13.94□□□□□ -0.18
SIRPA-201ENST00000356025 SIK1P57059 783 aa13.94□□□□□ -0.18
SIRPA-201ENST00000356025 ELF2Q15723 593 aa13.94□□□□□ -0.18
SIRPA-201ENST00000356025 KRI1Q8N9T8 703 aaKnown RBP13.94□□□□□ -0.18
SIRPA-201ENST00000356025 OXER1Q8TDS5 423 aa13.94□□□□□ -0.18
SIRPA-201ENST00000356025 NOL10Q9BSC4 688 aaKnown RBP13.94□□□□□ -0.18
SIRPA-201ENST00000356025 BLZF1Q9H2G9 400 aa13.94□□□□□ -0.18
SIRPA-201ENST00000356025 MCM9Q9NXL9 1143 aa13.94□□□□□ -0.18
SIRPA-201ENST00000356025 SAP30BPQ9UHR5 308 aaKnown RBP13.94□□□□□ -0.18
SIRPA-201ENST00000356025 HPS5Q9UPZ3 1129 aa13.94□□□□□ -0.18
SIRPA-201ENST00000356025 NFAT5O94916 1531 aa13.94□□□□□ -0.18
SIRPA-201ENST00000356025 FAM205CA6NFA0 338 aa13.94□□□□□ -0.18
SIRPA-201ENST00000356025 ILDR1Q86SU0 546 aaPredicted RBP13.94□□□□□ -0.18
SIRPA-201ENST00000356025 CCDC196A0A1B0GTZ2 297 aa13.94□□□□□ -0.18
SIRPA-201ENST00000356025 SH2B2O14492 632 aaPredicted RBP13.94□□□□□ -0.18
SIRPA-201ENST00000356025 NMT2O60551 498 aa13.94□□□□□ -0.18
SIRPA-201ENST00000356025 GNG11P61952 73 aa13.94□□□□□ -0.18
SIRPA-201ENST00000356025 FMR1NBQ8N0W7 255 aaPredicted RBP13.94□□□□□ -0.18
SIRPA-201ENST00000356025 RNF216Q9NWF9 866 aaPredicted RBP13.94□□□□□ -0.18
SIRPA-201ENST00000356025 PCDHB6Q9Y5E3 794 aa13.94□□□□□ -0.18
SIRPA-201ENST00000356025 FMN2Q9NZ56 1722 aa13.94□□□□□ -0.18
SIRPA-201ENST00000356025 CCT6AP40227 531 aaKnown RBP13.93□□□□□ -0.18
SIRPA-201ENST00000356025 GRIN1Q05586 938 aa13.93□□□□□ -0.18
SIRPA-201ENST00000356025 TEX35Q5T0J7 233 aa13.93□□□□□ -0.18
SIRPA-201ENST00000356025 ZNF654Q8IZM8 581 aa13.93□□□□□ -0.18
SIRPA-201ENST00000356025 DESI2Q9BSY9 194 aa13.93□□□□□ -0.18
SIRPA-201ENST00000356025 RNF41Q9H4P4 317 aaPredicted RBP13.93□□□□□ -0.18
SIRPA-201ENST00000356025 PRDM4Q9UKN5 801 aa13.93□□□□□ -0.18
SIRPA-201ENST00000356025 ZNF652Q9Y2D9 606 aa13.93□□□□□ -0.18
SIRPA-201ENST00000356025 IQCB1Q15051 598 aa13.93□□□□□ -0.18
SIRPA-201ENST00000356025 SKIDA1Q1XH10 827 aa13.93□□□□□ -0.18
SIRPA-201ENST00000356025 PPFIBP1Q86W92 1011 aa13.93□□□□□ -0.18
SIRPA-201ENST00000356025 SLC4A9Q96Q91 983 aa13.93□□□□□ -0.18
SIRPA-201ENST00000356025 LZTFL1Q9NQ48 299 aa13.93□□□□□ -0.18
SIRPA-201ENST00000356025 ZNF219Q9P2Y4 722 aaPredicted RBP13.93□□□□□ -0.18
SIRPA-201ENST00000356025 NFE2L3Q9Y4A8 694 aa13.93□□□□□ -0.18
SIRPA-201ENST00000356025 TNKSO95271 1327 aa13.93□□□□□ -0.18
SIRPA-201ENST00000356025 ZMYM6O95789 1325 aa13.93□□□□□ -0.18
SIRPA-201ENST00000356025 YEATS4O95619 227 aa13.93□□□□□ -0.18
SIRPA-201ENST00000356025 CAVIN2O95810 425 aa13.93□□□□□ -0.18
SIRPA-201ENST00000356025 NLRP12P59046 1061 aa13.93□□□□□ -0.18
SIRPA-201ENST00000356025 PPARAQ07869 468 aa13.93□□□□□ -0.18
SIRPA-201ENST00000356025 ERFEQ4G0M1 354 aa13.93□□□□□ -0.18
SIRPA-201ENST00000356025 DHX40Q8IX18 779 aaKnown RBP13.93□□□□□ -0.18
SIRPA-201ENST00000356025 TMEM87BQ96K49 555 aa13.93□□□□□ -0.18
SIRPA-201ENST00000356025 MYL5Q02045 173 aa13.92□□□□□ -0.18
SIRPA-201ENST00000356025 PIK3AP1Q6ZUJ8 805 aa13.92□□□□□ -0.18
SIRPA-201ENST00000356025 USP49Q70CQ1 688 aa13.92□□□□□ -0.18
SIRPA-201ENST00000356025 SRP68Q9UHB9 627 aaKnown RBP13.92□□□□□ -0.18
SIRPA-201ENST00000356025 TMEM232C9JQI7 657 aa13.92□□□□□ -0.18
SIRPA-201ENST00000356025 SLC39A14Q15043 492 aa13.92□□□□□ -0.18
SIRPA-201ENST00000356025 TRIM75PA6NK02 468 aa13.92□□□□□ -0.18
SIRPA-201ENST00000356025 GNPATO15228 680 aa13.92□□□□□ -0.18
SIRPA-201ENST00000356025 GSDMDP57764 484 aa13.92□□□□□ -0.18
SIRPA-201ENST00000356025 PLA2G4DQ86XP0 818 aa13.92□□□□□ -0.18
SIRPA-201ENST00000356025 RASGRP4Q8TDF6 673 aa13.92□□□□□ -0.18
SIRPA-201ENST00000356025 UBXN4Q92575 508 aa13.92□□□□□ -0.18
SIRPA-201ENST00000356025 CNNM2Q9H8M5 875 aa13.92□□□□□ -0.18
SIRPA-201ENST00000356025 UBN2Q6ZU65 1347 aa13.92□□□□□ -0.18
SIRPA-201ENST00000356025 POLR3GO15318 223 aaPredicted RBP13.91□□□□□ -0.18
SIRPA-201ENST00000356025 UBE3CQ15386 1083 aa13.91□□□□□ -0.18
SIRPA-201ENST00000356025 NOSTRINQ8IVI9 506 aa13.91□□□□□ -0.18
SIRPA-201ENST00000356025 FANCBQ8NB91 859 aa13.91□□□□□ -0.18
SIRPA-201ENST00000356025 DPF2Q92785 391 aa13.91□□□□□ -0.18
SIRPA-201ENST00000356025 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.91□□□□□ -0.18
SIRPA-201ENST00000356025 RGPD1P0DJD0 1748 aa13.91□□□□□ -0.18
SIRPA-201ENST00000356025 CBFA2T2O43439 604 aa13.91□□□□□ -0.18
SIRPA-201ENST00000356025 EPB41L4AQ9HCS5 686 aaPredicted RBP13.91□□□□□ -0.18
SIRPA-201ENST00000356025 CMA1P23946 247 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms