RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.59■□□□□ 0.89
PDLIM7-201ENST00000355572 CSADQ9Y600 493 aa20.59■□□□□ 0.89
PDLIM7-201ENST00000355572 CCL15-CCL14A0A0B4J2E2 113 aa20.58■□□□□ 0.89
PDLIM7-201ENST00000355572 IRF6O14896 467 aa20.58■□□□□ 0.89
PDLIM7-201ENST00000355572 INHBEP58166 350 aa20.58■□□□□ 0.89
PDLIM7-201ENST00000355572 CCL15Q16663 113 aa20.58■□□□□ 0.89
PDLIM7-201ENST00000355572 NOM1Q5C9Z4 860 aaKnown RBP20.58■□□□□ 0.89
PDLIM7-201ENST00000355572 TTC39AQ5SRH9 613 aa20.58■□□□□ 0.89
PDLIM7-201ENST00000355572 ZBTB40Q9NUA8 1239 aa20.58■□□□□ 0.89
PDLIM7-201ENST00000355572 PHF20L1A8MW92 1017 aa20.57■□□□□ 0.88
PDLIM7-201ENST00000355572 FKTNO75072 461 aa20.57■□□□□ 0.88
PDLIM7-201ENST00000355572 ENTPD3O75355 529 aa20.57■□□□□ 0.88
PDLIM7-201ENST00000355572 UQCRFS1P1P0C7P4 283 aa20.57■□□□□ 0.88
PDLIM7-201ENST00000355572 DCAF15Q66K64 600 aa20.57■□□□□ 0.88
PDLIM7-201ENST00000355572 SPTY2D1Q68D10 685 aaPredicted RBP20.57■□□□□ 0.88
PDLIM7-201ENST00000355572 ERO1BQ86YB8 467 aa20.57■□□□□ 0.88
PDLIM7-201ENST00000355572 RAI14Q9P0K7 980 aa20.57■□□□□ 0.88
PDLIM7-201ENST00000355572 FAM196BA6NMK8 535 aa20.56■□□□□ 0.88
PDLIM7-201ENST00000355572 IL1RAPL2Q9NP60 686 aa20.56■□□□□ 0.88
PDLIM7-201ENST00000355572 MYH1P12882 1939 aa20.56■□□□□ 0.88
PDLIM7-201ENST00000355572 ALDH1A1P00352 501 aa20.55■□□□□ 0.88
PDLIM7-201ENST00000355572 MOGSQ13724 837 aa20.55■□□□□ 0.88
PDLIM7-201ENST00000355572 CCDC84Q86UT8 332 aaPredicted RBP20.55■□□□□ 0.88
PDLIM7-201ENST00000355572 SH3RF3Q8TEJ3 882 aaPredicted RBP20.55■□□□□ 0.88
PDLIM7-201ENST00000355572 ANTXR1Q9H6X2 564 aa20.55■□□□□ 0.88
PDLIM7-201ENST00000355572 BTBD19C9JJ37 291 aa20.54■□□□□ 0.88
PDLIM7-201ENST00000355572 MAP3K10Q02779 954 aa20.54■□□□□ 0.88
PDLIM7-201ENST00000355572 PPIL2Q13356 520 aa20.54■□□□□ 0.88
PDLIM7-201ENST00000355572 RRP1BQ14684 758 aaKnown RBP20.54■□□□□ 0.88
PDLIM7-201ENST00000355572 NOL9Q5SY16 702 aaKnown RBP20.54■□□□□ 0.88
PDLIM7-201ENST00000355572 CD99L2Q8TCZ2 262 aa20.54■□□□□ 0.88
PDLIM7-201ENST00000355572 ZNF512BQ96KM6 892 aaPredicted RBP20.54■□□□□ 0.88
PDLIM7-201ENST00000355572 LRP2BPQ9P2M1 347 aa20.54■□□□□ 0.88
PDLIM7-201ENST00000355572 HPS5Q9UPZ3 1129 aa20.54■□□□□ 0.88
PDLIM7-201ENST00000355572 APBB1O00213 710 aa20.53■□□□□ 0.88
PDLIM7-201ENST00000355572 GTF2A2P52657 109 aa20.53■□□□□ 0.88
PDLIM7-201ENST00000355572 CCDC158Q5M9N0 1113 aa20.53■□□□□ 0.88
PDLIM7-201ENST00000355572 AACSQ86V21 672 aa20.53■□□□□ 0.88
PDLIM7-201ENST00000355572 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.53■□□□□ 0.88
PDLIM7-201ENST00000355572 RHPN1Q8TCX5 695 aa20.53■□□□□ 0.88
PDLIM7-201ENST00000355572 DDX19BQ9UMR2 479 aa20.53■□□□□ 0.88
PDLIM7-201ENST00000355572 DDX60LQ5H9U9 1706 aaKnown RBP20.53■□□□□ 0.88
PDLIM7-201ENST00000355572 SOX10P56693 466 aa20.52■□□□□ 0.88
PDLIM7-201ENST00000355572 SLF2Q8IX21 1173 aa20.52■□□□□ 0.88
PDLIM7-201ENST00000355572 AATFQ9NY61 560 aaKnown RBP eCLIP20.52■□□□□ 0.88
PDLIM7-201ENST00000355572 COL2A1P02458 1487 aaPredicted RBP20.51■□□□□ 0.87
PDLIM7-201ENST00000355572 DYNLL1P63167 89 aaKnown RBP20.51■□□□□ 0.87
PDLIM7-201ENST00000355572 PPATQ06203 517 aa20.51■□□□□ 0.87
PDLIM7-201ENST00000355572 TAF1CQ15572 869 aaPredicted RBP20.51■□□□□ 0.87
PDLIM7-201ENST00000355572 OTOP1Q7RTM1 612 aa20.51■□□□□ 0.87
PDLIM7-201ENST00000355572 ZSCAN29Q8IWY8 852 aaPredicted RBP20.51■□□□□ 0.87
PDLIM7-201ENST00000355572 HOOK2Q96ED9 719 aa20.51■□□□□ 0.87
PDLIM7-201ENST00000355572 OSBPL5Q9H0X9 879 aaPredicted RBP20.51■□□□□ 0.87
PDLIM7-201ENST00000355572 KCNH4Q9UQ05 1017 aa20.51■□□□□ 0.87
PDLIM7-201ENST00000355572 MGAMO43451 1857 aa20.51■□□□□ 0.87
PDLIM7-201ENST00000355572 LDHCP07864 332 aa20.5■□□□□ 0.87
PDLIM7-201ENST00000355572 RGS19P49795 217 aa20.5■□□□□ 0.87
PDLIM7-201ENST00000355572 NAA16Q6N069 864 aaPredicted RBP20.5■□□□□ 0.87
PDLIM7-201ENST00000355572 MYH7P12883 1935 aa20.5■□□□□ 0.87
PDLIM7-201ENST00000355572 LOC285556D6RIA3 1793 aa20.49■□□□□ 0.87
PDLIM7-201ENST00000355572 CETPP11597 493 aa20.49■□□□□ 0.87
PDLIM7-201ENST00000355572 MS4A1P11836 297 aa20.49■□□□□ 0.87
PDLIM7-201ENST00000355572 GSTO1P78417 241 aa20.49■□□□□ 0.87
PDLIM7-201ENST00000355572 SNAPC2Q13487 334 aa20.49■□□□□ 0.87
PDLIM7-201ENST00000355572 SHROOM1Q2M3G4 852 aaPredicted RBP20.49■□□□□ 0.87
PDLIM7-201ENST00000355572 RPAP2Q8IXW5 612 aaPredicted RBP20.49■□□□□ 0.87
PDLIM7-201ENST00000355572 TEX11Q8IYF3 940 aa20.49■□□□□ 0.87
PDLIM7-201ENST00000355572 TRIM17Q9Y577 477 aa20.49■□□□□ 0.87
PDLIM7-201ENST00000355572 HTTP42858 3142 aa20.49■□□□□ 0.87
PDLIM7-201ENST00000355572 NAV1Q8NEY1 1877 aa20.49■□□□□ 0.87
PDLIM7-201ENST00000355572 NPM3O75607 178 aaKnown RBP20.48■□□□□ 0.87
PDLIM7-201ENST00000355572 PTPRAP18433 802 aa20.48■□□□□ 0.87
PDLIM7-201ENST00000355572 JAG1P78504 1218 aa20.48■□□□□ 0.87
PDLIM7-201ENST00000355572 GPAT2Q6NUI2 795 aa20.48■□□□□ 0.87
PDLIM7-201ENST00000355572 SCYL3Q8IZE3 742 aa20.48■□□□□ 0.87
PDLIM7-201ENST00000355572 EDC3Q96F86 508 aaKnown RBP20.48■□□□□ 0.87
PDLIM7-201ENST00000355572 ARHGAP39Q9C0H5 1083 aa20.48■□□□□ 0.87
PDLIM7-201ENST00000355572 BCL11AQ9H165 835 aa20.48■□□□□ 0.87
PDLIM7-201ENST00000355572 DNAJC18Q9H819 358 aa20.48■□□□□ 0.87
PDLIM7-201ENST00000355572 ADGRA2Q96PE1 1338 aa20.48■□□□□ 0.87
PDLIM7-201ENST00000355572 CTGFP29279 349 aa20.47■□□□□ 0.87
PDLIM7-201ENST00000355572 PPP4CP60510 307 aa20.47■□□□□ 0.87
PDLIM7-201ENST00000355572 SP3Q02447 781 aa20.47■□□□□ 0.87
PDLIM7-201ENST00000355572 OTUD7BQ6GQQ9 843 aa20.47■□□□□ 0.87
PDLIM7-201ENST00000355572 FBXO46Q6PJ61 603 aaPredicted RBP20.47■□□□□ 0.87
PDLIM7-201ENST00000355572 MAPKAPK5Q8IW41 473 aa20.47■□□□□ 0.87
PDLIM7-201ENST00000355572 ECM2O94769 699 aaPredicted RBP20.46■□□□□ 0.87
PDLIM7-201ENST00000355572 PDE3AQ14432 1141 aa20.46■□□□□ 0.87
PDLIM7-201ENST00000355572 ERC1Q8IUD2 1116 aa20.46■□□□□ 0.87
PDLIM7-201ENST00000355572 MIGA1Q8NAN2 632 aa20.46■□□□□ 0.87
PDLIM7-201ENST00000355572 TGFBRAP1Q8WUH2 860 aa20.46■□□□□ 0.87
PDLIM7-201ENST00000355572 ZHX2Q9Y6X8 837 aa20.46■□□□□ 0.87
PDLIM7-201ENST00000355572 FLT1P17948 1338 aa20.46■□□□□ 0.87
PDLIM7-201ENST00000355572 RBBP6Q7Z6E9 1792 aaKnown RBP20.46■□□□□ 0.87
PDLIM7-201ENST00000355572 IDH1O75874 414 aaKnown RBP20.45■□□□□ 0.86
PDLIM7-201ENST00000355572 CYP7A1P22680 504 aa20.45■□□□□ 0.86
PDLIM7-201ENST00000355572 PKN2Q16513 984 aaKnown RBP20.45■□□□□ 0.86
PDLIM7-201ENST00000355572 SLC4A8Q2Y0W8 1093 aa20.45■□□□□ 0.86
PDLIM7-201ENST00000355572 SLFNL1Q499Z3 407 aa20.45■□□□□ 0.86
PDLIM7-201ENST00000355572 MAGEB6Q8N7X4 407 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms