RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 ANKRD2Q9GZV1 360 aa16.61■□□□□ 0.25
LMX1B-201ENST00000355497 EXOC7Q9UPT5 735 aa16.61■□□□□ 0.25
LMX1B-201ENST00000355497 SYNJ1O43426 1573 aa16.61■□□□□ 0.25
LMX1B-201ENST00000355497 SYNRGQ9UMZ2 1314 aa16.61■□□□□ 0.25
LMX1B-201ENST00000355497 MAP7Q14244 749 aa16.6■□□□□ 0.25
LMX1B-201ENST00000355497 RILPL1Q5EBL4 403 aa16.6■□□□□ 0.25
LMX1B-201ENST00000355497 RUFY4Q6ZNE9 571 aa16.6■□□□□ 0.25
LMX1B-201ENST00000355497 NUP58Q9BVL2 599 aa16.6■□□□□ 0.25
LMX1B-201ENST00000355497 CLEC11AQ9Y240 323 aa16.6■□□□□ 0.25
LMX1B-201ENST00000355497 CETN3O15182 167 aa16.6■□□□□ 0.25
LMX1B-201ENST00000355497 ERCC3P19447 782 aa16.6■□□□□ 0.25
LMX1B-201ENST00000355497 RNASE9P60153 205 aaKnown RBP16.6■□□□□ 0.25
LMX1B-201ENST00000355497 PSMD6Q15008 389 aa16.6■□□□□ 0.25
LMX1B-201ENST00000355497 PKD2L1Q9P0L9 805 aa16.6■□□□□ 0.25
LMX1B-201ENST00000355497 KIF14Q15058 1648 aa16.6■□□□□ 0.25
LMX1B-201ENST00000355497 I3L4J1 428 aa16.6■□□□□ 0.25
LMX1B-201ENST00000355497 VSIG1Q86XK7 387 aa16.6■□□□□ 0.25
LMX1B-201ENST00000355497 SMAP1Q8IYB5 467 aaPredicted RBP16.6■□□□□ 0.25
LMX1B-201ENST00000355497 SLC39A6Q13433 755 aa16.6■□□□□ 0.25
LMX1B-201ENST00000355497 TRPC3Q13507 836 aa16.6■□□□□ 0.25
LMX1B-201ENST00000355497 MAGI1Q96QZ7 1491 aaPredicted RBP16.6■□□□□ 0.25
LMX1B-201ENST00000355497 CCDC169A6NNP5 214 aa16.59■□□□□ 0.25
LMX1B-201ENST00000355497 ARHGAP25P42331 645 aa16.59■□□□□ 0.25
LMX1B-201ENST00000355497 TMCO4Q5TGY1 634 aa16.59■□□□□ 0.25
LMX1B-201ENST00000355497 PHLDB2Q86SQ0 1253 aa16.59■□□□□ 0.25
LMX1B-201ENST00000355497 C8orf58Q8NAV2 365 aa16.59■□□□□ 0.25
LMX1B-201ENST00000355497 PLCB1Q9NQ66 1216 aa16.59■□□□□ 0.25
LMX1B-201ENST00000355497 HAUS3Q68CZ6 603 aa16.59■□□□□ 0.25
LMX1B-201ENST00000355497 SH2D4AQ9H788 454 aa16.59■□□□□ 0.25
LMX1B-201ENST00000355497 CEP85Q6P2H3 762 aa16.59■□□□□ 0.25
LMX1B-201ENST00000355497 DZIP3Q86Y13 1208 aaKnown RBP16.59■□□□□ 0.25
LMX1B-201ENST00000355497 SIRT1Q96EB6 747 aa16.59■□□□□ 0.25
LMX1B-201ENST00000355497 STRN3Q13033 797 aa16.59■□□□□ 0.25
LMX1B-201ENST00000355497 SRGAP1Q7Z6B7 1085 aa16.59■□□□□ 0.25
LMX1B-201ENST00000355497 ACSBG1Q96GR2 724 aa16.59■□□□□ 0.25
LMX1B-201ENST00000355497 DEXIO95424 95 aa16.58■□□□□ 0.25
LMX1B-201ENST00000355497 PRPF31Q8WWY3 499 aaKnown RBP16.58■□□□□ 0.25
LMX1B-201ENST00000355497 ZNF853P0CG23 659 aa16.58■□□□□ 0.25
LMX1B-201ENST00000355497 ZC3H12CQ9C0D7 883 aaKnown RBP16.58■□□□□ 0.25
LMX1B-201ENST00000355497 ASIC3Q9UHC3 531 aa16.58■□□□□ 0.25
LMX1B-201ENST00000355497 STK24Q9Y6E0 443 aa16.58■□□□□ 0.25
LMX1B-201ENST00000355497 CCNT1O60563 726 aaKnown RBP16.58■□□□□ 0.24
LMX1B-201ENST00000355497 CHMLP26374 656 aa16.58■□□□□ 0.24
LMX1B-201ENST00000355497 LGSNQ5TDP6 509 aa16.58■□□□□ 0.24
LMX1B-201ENST00000355497 TRIM31Q9BZY9 425 aa16.58■□□□□ 0.24
LMX1B-201ENST00000355497 GOLGA6BA6NDN3 693 aa16.58■□□□□ 0.24
LMX1B-201ENST00000355497 IRS4O14654 1257 aaPredicted RBP16.58■□□□□ 0.24
LMX1B-201ENST00000355497 CHMP2AO43633 222 aa16.58■□□□□ 0.24
LMX1B-201ENST00000355497 PAK1Q13153 545 aa16.58■□□□□ 0.24
LMX1B-201ENST00000355497 CSGALNACT2Q8N6G5 542 aa16.58■□□□□ 0.24
LMX1B-201ENST00000355497 C14orf93Q9H972 538 aaKnown RBP16.58■□□□□ 0.24
LMX1B-201ENST00000355497 ADGRL1O94910 1474 aa16.58■□□□□ 0.24
LMX1B-201ENST00000355497 GRM1Q13255 1194 aa16.58■□□□□ 0.24
LMX1B-201ENST00000355497 MTMR3Q13615 1198 aa16.58■□□□□ 0.24
LMX1B-201ENST00000355497 LINS1Q8NG48 757 aa16.58■□□□□ 0.24
LMX1B-201ENST00000355497 KCNH3Q9ULD8 1083 aa16.58■□□□□ 0.24
LMX1B-201ENST00000355497 TTC6Q86TZ1 520 aa16.57■□□□□ 0.24
LMX1B-201ENST00000355497 RAB3IPQ96QF0 476 aaPredicted RBP16.57■□□□□ 0.24
LMX1B-201ENST00000355497 DCTPP1Q9H773 170 aa16.57■□□□□ 0.24
LMX1B-201ENST00000355497 RABGAP1Q9Y3P9 1069 aa16.57■□□□□ 0.24
LMX1B-201ENST00000355497 RPS6KB1P23443 525 aa16.57■□□□□ 0.24
LMX1B-201ENST00000355497 FANCCQ00597 558 aa16.57■□□□□ 0.24
LMX1B-201ENST00000355497 CCDC170Q8IYT3 715 aa16.57■□□□□ 0.24
LMX1B-201ENST00000355497 ANO1Q5XXA6 986 aa16.57■□□□□ 0.24
LMX1B-201ENST00000355497 GABPAQ06546 454 aa16.57■□□□□ 0.24
LMX1B-201ENST00000355497 PAK2Q13177 524 aa16.57■□□□□ 0.24
LMX1B-201ENST00000355497 SLC9C1Q4G0N8 1177 aa16.57■□□□□ 0.24
LMX1B-201ENST00000355497 PIK3AP1Q6ZUJ8 805 aa16.57■□□□□ 0.24
LMX1B-201ENST00000355497 CARD6Q9BX69 1037 aa16.57■□□□□ 0.24
LMX1B-201ENST00000355497 CLSTN2Q9H4D0 955 aa16.57■□□□□ 0.24
LMX1B-201ENST00000355497 CTTNBP2NLQ9P2B4 639 aa16.57■□□□□ 0.24
LMX1B-201ENST00000355497 MBD4O95243 580 aa16.57■□□□□ 0.24
LMX1B-201ENST00000355497 SYCE1Q8N0S2 351 aa16.57■□□□□ 0.24
LMX1B-201ENST00000355497 EYA3Q99504 573 aa16.57■□□□□ 0.24
LMX1B-201ENST00000355497 PDE1CQ14123 709 aaPredicted RBP16.56■□□□□ 0.24
LMX1B-201ENST00000355497 RBM26Q5T8P6 1007 aaKnown RBP16.56■□□□□ 0.24
LMX1B-201ENST00000355497 TPTE2Q6XPS3 522 aa16.56■□□□□ 0.24
LMX1B-201ENST00000355497 GPCPD1Q9NPB8 672 aa16.56■□□□□ 0.24
LMX1B-201ENST00000355497 TSKSQ9UJT2 592 aa16.56■□□□□ 0.24
LMX1B-201ENST00000355497 CD109Q6YHK3 1445 aa16.56■□□□□ 0.24
LMX1B-201ENST00000355497 CUL4BQ13620 913 aa16.56■□□□□ 0.24
LMX1B-201ENST00000355497 FBXO31Q5XUX0 539 aaPredicted RBP16.56■□□□□ 0.24
LMX1B-201ENST00000355497 USP26Q9BXU7 913 aa16.56■□□□□ 0.24
LMX1B-201ENST00000355497 USH1CQ9Y6N9 552 aa16.56■□□□□ 0.24
LMX1B-201ENST00000355497 MAP3K1Q13233 1512 aa16.56■□□□□ 0.24
LMX1B-201ENST00000355497 ASXL1Q8IXJ9 1541 aa16.56■□□□□ 0.24
LMX1B-201ENST00000355497 CEP104O60308 925 aa16.56■□□□□ 0.24
LMX1B-201ENST00000355497 HELBQ8NG08 1087 aaPredicted RBP16.56■□□□□ 0.24
LMX1B-201ENST00000355497 IMPACTQ9P2X3 320 aa16.56■□□□□ 0.24
LMX1B-201ENST00000355497 KLHL7Q8IXQ5 586 aa16.55■□□□□ 0.24
LMX1B-201ENST00000355497 CABS1Q96KC9 395 aa16.55■□□□□ 0.24
LMX1B-201ENST00000355497 DENND2AQ9ULE3 1009 aa16.55■□□□□ 0.24
LMX1B-201ENST00000355497 AFG3L2Q9Y4W6 797 aa16.55■□□□□ 0.24
LMX1B-201ENST00000355497 TXNDC9O14530 226 aa16.55■□□□□ 0.24
LMX1B-201ENST00000355497 HGSO14964 777 aaPredicted RBP16.55■□□□□ 0.24
LMX1B-201ENST00000355497 RIMBP2O15034 1052 aa16.55■□□□□ 0.24
LMX1B-201ENST00000355497 SAP30BPQ9UHR5 308 aaKnown RBP16.55■□□□□ 0.24
LMX1B-201ENST00000355497 PRXQ9BXM0 1461 aa16.55■□□□□ 0.24
LMX1B-201ENST00000355497 CCDC38Q502W7 563 aa16.55■□□□□ 0.24
LMX1B-201ENST00000355497 RIOK3O14730 519 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms