RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 EVCP57679 992 aa13.98□□□□□ -0.17
COLCA1-201ENST00000355430 CTAGE6Q86UF2 777 aa13.98□□□□□ -0.17
COLCA1-201ENST00000355430 CTAGE4Q8IX94 777 aa13.98□□□□□ -0.17
COLCA1-201ENST00000355430 TEX11Q8IYF3 940 aa13.98□□□□□ -0.17
COLCA1-201ENST00000355430 ATF5Q9Y2D1 282 aaPredicted RBP13.98□□□□□ -0.17
COLCA1-201ENST00000355430 CACNA2D4Q7Z3S7 1137 aa13.98□□□□□ -0.17
COLCA1-201ENST00000355430 MAP4K1Q92918 833 aa13.98□□□□□ -0.17
COLCA1-201ENST00000355430 USP28Q96RU2 1077 aa13.98□□□□□ -0.17
COLCA1-201ENST00000355430 IMPACTQ9P2X3 320 aa13.98□□□□□ -0.17
COLCA1-201ENST00000355430 IGSF1Q8N6C5 1336 aa13.98□□□□□ -0.17
COLCA1-201ENST00000355430 FAM182BQ5T319 152 aa13.97□□□□□ -0.17
COLCA1-201ENST00000355430 TAF4BQ92750 862 aa13.97□□□□□ -0.17
COLCA1-201ENST00000355430 USP6P35125 1406 aa13.97□□□□□ -0.17
COLCA1-201ENST00000355430 CTR9Q6PD62 1173 aa13.97□□□□□ -0.17
COLCA1-201ENST00000355430 PI4K2BQ8TCG2 481 aa13.97□□□□□ -0.17
COLCA1-201ENST00000355430 B4E1Z4 1266 aa13.97□□□□□ -0.17
COLCA1-201ENST00000355430 USO1O60763 962 aaKnown RBP13.97□□□□□ -0.17
COLCA1-201ENST00000355430 CCDC24Q8N4L8 307 aa13.97□□□□□ -0.17
COLCA1-201ENST00000355430 SHTN1A0MZ66 631 aa13.97□□□□□ -0.17
COLCA1-201ENST00000355430 CRKLP46109 303 aaKnown RBP13.97□□□□□ -0.17
COLCA1-201ENST00000355430 PROSER3Q2NL68 480 aa13.97□□□□□ -0.17
COLCA1-201ENST00000355430 TRIM47Q96LD4 638 aa13.97□□□□□ -0.17
COLCA1-201ENST00000355430 ZKSCAN3Q9BRR0 538 aa13.97□□□□□ -0.17
COLCA1-201ENST00000355430 XPO4Q9C0E2 1151 aaKnown RBP13.97□□□□□ -0.17
COLCA1-201ENST00000355430 CTAGE9A4FU28 777 aa13.97□□□□□ -0.17
COLCA1-201ENST00000355430 SPECC1Q5M775 1068 aa13.97□□□□□ -0.17
COLCA1-201ENST00000355430 IFIT1BQ5T764 474 aaKnown RBP13.97□□□□□ -0.17
COLCA1-201ENST00000355430 USPL1Q5W0Q7 1092 aa13.97□□□□□ -0.17
COLCA1-201ENST00000355430 MAGEB6Q8N7X4 407 aa13.97□□□□□ -0.17
COLCA1-201ENST00000355430 SAMM50Q9Y512 469 aa13.97□□□□□ -0.17
COLCA1-201ENST00000355430 PNPLA6Q8IY17 1366 aa13.97□□□□□ -0.17
COLCA1-201ENST00000355430 TRIM75PA6NK02 468 aa13.96□□□□□ -0.17
COLCA1-201ENST00000355430 ENOX2Q16206 610 aaKnown RBP13.96□□□□□ -0.17
COLCA1-201ENST00000355430 ZNF569Q5MCW4 686 aa13.96□□□□□ -0.17
COLCA1-201ENST00000355430 LRRC8AQ8IWT6 810 aa13.96□□□□□ -0.17
COLCA1-201ENST00000355430 CEP112Q8N8E3 955 aa13.96□□□□□ -0.17
COLCA1-201ENST00000355430 DCPSQ96C86 337 aaKnown RBP13.96□□□□□ -0.17
COLCA1-201ENST00000355430 GJD4Q96KN9 370 aaPredicted RBP13.96□□□□□ -0.17
COLCA1-201ENST00000355430 JADE2Q9NQC1 790 aa13.96□□□□□ -0.17
COLCA1-201ENST00000355430 RPS8P62241 208 aaKnown RBP13.96□□□□□ -0.17
COLCA1-201ENST00000355430 IVNS1ABPQ9Y6Y0 642 aa13.96□□□□□ -0.17
COLCA1-201ENST00000355430 PPP2R3AQ06190 1150 aa13.96□□□□□ -0.17
COLCA1-201ENST00000355430 XAGE2Q96GT9 111 aa13.96□□□□□ -0.17
COLCA1-201ENST00000355430 CARD6Q9BX69 1037 aa13.96□□□□□ -0.17
COLCA1-201ENST00000355430 JAG2Q9Y219 1238 aa13.96□□□□□ -0.17
COLCA1-201ENST00000355430 ERLIN2O94905 339 aa13.96□□□□□ -0.18
COLCA1-201ENST00000355430 PYM1Q9BRP8 204 aaKnown RBP13.95□□□□□ -0.18
COLCA1-201ENST00000355430 KCNH3Q9ULD8 1083 aa13.95□□□□□ -0.18
COLCA1-201ENST00000355430 MROH5Q6ZUA9 1318 aa13.95□□□□□ -0.18
COLCA1-201ENST00000355430 PFKFB2O60825 505 aa13.95□□□□□ -0.18
COLCA1-201ENST00000355430 ATP2B4P23634 1241 aa13.95□□□□□ -0.18
COLCA1-201ENST00000355430 UBA7P41226 1012 aa13.95□□□□□ -0.18
COLCA1-201ENST00000355430 TMC4Q7Z404 712 aa13.95□□□□□ -0.18
COLCA1-201ENST00000355430 ZNF589Q86UQ0 364 aaPredicted RBP13.95□□□□□ -0.18
COLCA1-201ENST00000355430 RMND1Q9NWS8 449 aa13.95□□□□□ -0.18
COLCA1-201ENST00000355430 SCRN1Q12765 414 aa13.95□□□□□ -0.18
COLCA1-201ENST00000355430 KIF22Q14807 665 aa13.95□□□□□ -0.18
COLCA1-201ENST00000355430 TDRD12Q587J7 1177 aaKnown RBP13.95□□□□□ -0.18
COLCA1-201ENST00000355430 MIGA1Q8NAN2 632 aa13.95□□□□□ -0.18
COLCA1-201ENST00000355430 TSG101Q99816 390 aa13.95□□□□□ -0.18
COLCA1-201ENST00000355430 DSCC1Q9BVC3 393 aa13.95□□□□□ -0.18
COLCA1-201ENST00000355430 ARHGEF10LQ9HCE6 1279 aa13.95□□□□□ -0.18
COLCA1-201ENST00000355430 RHOXF2BP0C7M4 288 aa13.95□□□□□ -0.18
COLCA1-201ENST00000355430 STAT6P42226 847 aa13.95□□□□□ -0.18
COLCA1-201ENST00000355430 KIAA1524Q8TCG1 905 aa13.95□□□□□ -0.18
COLCA1-201ENST00000355430 PDLIM2Q96JY6 352 aa13.95□□□□□ -0.18
COLCA1-201ENST00000355430 RHOXF2Q9BQY4 288 aa13.95□□□□□ -0.18
COLCA1-201ENST00000355430 CSADQ9Y600 493 aa13.95□□□□□ -0.18
COLCA1-201ENST00000355430 ADCY9O60503 1353 aa13.95□□□□□ -0.18
COLCA1-201ENST00000355430 PTPRMP28827 1452 aa13.94□□□□□ -0.18
COLCA1-201ENST00000355430 GPAA1O43292 621 aa13.94□□□□□ -0.18
COLCA1-201ENST00000355430 ARHGEF6Q15052 776 aa13.94□□□□□ -0.18
COLCA1-201ENST00000355430 SULF1Q8IWU6 871 aa13.94□□□□□ -0.18
COLCA1-201ENST00000355430 SEPT11Q9NVA2 429 aaKnown RBP13.94□□□□□ -0.18
COLCA1-201ENST00000355430 ERBB3P21860 1342 aa13.94□□□□□ -0.18
COLCA1-201ENST00000355430 PAFAH1B1P43034 410 aa13.94□□□□□ -0.18
COLCA1-201ENST00000355430 GABPB1Q06547 395 aaPredicted RBP13.94□□□□□ -0.18
COLCA1-201ENST00000355430 PHKBQ93100 1093 aa13.94□□□□□ -0.18
COLCA1-201ENST00000355430 TAF5LO75529 589 aa13.94□□□□□ -0.18
COLCA1-201ENST00000355430 KIF20AO95235 890 aa13.94□□□□□ -0.18
COLCA1-201ENST00000355430 BMP15O95972 392 aa13.94□□□□□ -0.18
COLCA1-201ENST00000355430 POLA2Q14181 598 aa13.94□□□□□ -0.18
COLCA1-201ENST00000355430 TDRD7Q8NHU6 1098 aaKnown RBP13.94□□□□□ -0.18
COLCA1-201ENST00000355430 CYP2E1P05181 493 aaPredicted RBP13.94□□□□□ -0.18
COLCA1-201ENST00000355430 SMARCC2Q8TAQ2 1214 aa13.94□□□□□ -0.18
COLCA1-201ENST00000355430 VPS18Q9P253 973 aa13.94□□□□□ -0.18
COLCA1-201ENST00000355430 TNS3Q68CZ2 1445 aa13.94□□□□□ -0.18
COLCA1-201ENST00000355430 AKR1B15C9JRZ8 316 aaPredicted RBP13.93□□□□□ -0.18
COLCA1-201ENST00000355430 KRT2P35908 639 aa13.93□□□□□ -0.18
COLCA1-201ENST00000355430 BRDTQ58F21 947 aaPredicted RBP13.93□□□□□ -0.18
COLCA1-201ENST00000355430 DALRD3Q5D0E6 543 aaKnown RBP13.93□□□□□ -0.18
COLCA1-201ENST00000355430 APPBP2Q92624 585 aa13.93□□□□□ -0.18
COLCA1-201ENST00000355430 MYL10Q9BUA6 226 aa13.93□□□□□ -0.18
COLCA1-201ENST00000355430 ZNF215Q9UL58 517 aaPredicted RBP13.93□□□□□ -0.18
COLCA1-201ENST00000355430 PPRC1Q5VV67 1664 aaKnown RBP13.93□□□□□ -0.18
COLCA1-201ENST00000355430 IL6STP40189 918 aaPredicted RBP13.93□□□□□ -0.18
COLCA1-201ENST00000355430 ADALQ6DHV7 355 aa13.93□□□□□ -0.18
COLCA1-201ENST00000355430 TCP11L1Q9NUJ3 509 aa13.93□□□□□ -0.18
COLCA1-201ENST00000355430 ANGEL1Q9UNK9 670 aaKnown RBP13.93□□□□□ -0.18
COLCA1-201ENST00000355430 PNOCQ13519 176 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms