RNA–Protein interactions for RNA: ENST00000353319.8

PTPN2-203, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-203ENST00000353319 PARP3Q9Y6F1 533 aa12.34□□□□□ -0.43
PTPN2-203ENST00000353319 LTBP1Q14766 1721 aa12.33□□□□□ -0.43
PTPN2-203ENST00000353319 PPEF1O14829 653 aaPredicted RBP12.33□□□□□ -0.44
PTPN2-203ENST00000353319 IFIT3O14879 490 aaKnown RBP12.33□□□□□ -0.44
PTPN2-203ENST00000353319 GADD45BO75293 160 aaPredicted RBP12.33□□□□□ -0.44
PTPN2-203ENST00000353319 SART3Q15020 963 aaKnown RBP12.33□□□□□ -0.44
PTPN2-203ENST00000353319 FOXD4L6Q3SYB3 417 aaPredicted RBP12.33□□□□□ -0.44
PTPN2-203ENST00000353319 TMEM67Q5HYA8 995 aa12.33□□□□□ -0.44
PTPN2-203ENST00000353319 CTR9Q6PD62 1173 aa12.33□□□□□ -0.44
PTPN2-203ENST00000353319 POTEAQ6S8J7 498 aa12.33□□□□□ -0.44
PTPN2-203ENST00000353319 FOXD4L3Q6VB84 417 aaPredicted RBP12.33□□□□□ -0.44
PTPN2-203ENST00000353319 GAS2L3Q86XJ1 694 aa12.33□□□□□ -0.44
PTPN2-203ENST00000353319 DZIP1Q86YF9 867 aaKnown RBP12.33□□□□□ -0.44
PTPN2-203ENST00000353319 ESR2Q92731 530 aa12.33□□□□□ -0.44
PTPN2-203ENST00000353319 SYAP1Q96A49 352 aaPredicted RBP12.33□□□□□ -0.44
PTPN2-203ENST00000353319 FAM163AQ96GL9 167 aaPredicted RBP12.33□□□□□ -0.44
PTPN2-203ENST00000353319 GDPD2Q9HCC8 539 aa12.33□□□□□ -0.44
PTPN2-203ENST00000353319 TMEM63CQ9P1W3 806 aa12.33□□□□□ -0.44
PTPN2-203ENST00000353319 POLLQ9UGP5 575 aa12.33□□□□□ -0.44
PTPN2-203ENST00000353319 NAP1L2Q9ULW6 460 aaPredicted RBP12.33□□□□□ -0.44
PTPN2-203ENST00000353319 FAM205AQ6ZU69 1335 aa12.33□□□□□ -0.44
PTPN2-203ENST00000353319 CPLX1O14810 134 aa12.32□□□□□ -0.44
PTPN2-203ENST00000353319 ZBTB43O43298 467 aa12.32□□□□□ -0.44
PTPN2-203ENST00000353319 CDKL5O76039 1030 aa12.32□□□□□ -0.44
PTPN2-203ENST00000353319 MMP10P09238 476 aa12.32□□□□□ -0.44
PTPN2-203ENST00000353319 METAP2P50579 478 aaKnown RBP eCLIP12.32□□□□□ -0.44
PTPN2-203ENST00000353319 PPP2R5BQ15173 497 aa12.32□□□□□ -0.44
PTPN2-203ENST00000353319 CPLX2Q6PUV4 134 aaKnown RBP12.32□□□□□ -0.44
PTPN2-203ENST00000353319 SLC51AQ86UW1 340 aa12.32□□□□□ -0.44
PTPN2-203ENST00000353319 TBC1D22AQ8WUA7 517 aa12.32□□□□□ -0.44
PTPN2-203ENST00000353319 MASTLQ96GX5 879 aa12.32□□□□□ -0.44
PTPN2-203ENST00000353319 CAMKK2Q96RR4 588 aa12.32□□□□□ -0.44
PTPN2-203ENST00000353319 DCP1AQ9NPI6 582 aaPredicted RBP12.32□□□□□ -0.44
PTPN2-203ENST00000353319 MKRN1Q9UHC7 482 aaKnown RBP12.32□□□□□ -0.44
PTPN2-203ENST00000353319 EP400Q96L91 3159 aa12.32□□□□□ -0.44
PTPN2-203ENST00000353319 MINDY4BA8MYZ0 360 aa12.32□□□□□ -0.44
PTPN2-203ENST00000353319 ORC4O43929 436 aa12.32□□□□□ -0.44
PTPN2-203ENST00000353319 BAG3O95817 575 aa12.32□□□□□ -0.44
PTPN2-203ENST00000353319 XRCC6P12956 609 aaKnown RBP eCLIP12.32□□□□□ -0.44
PTPN2-203ENST00000353319 FERMT3Q86UX7 667 aa12.32□□□□□ -0.44
PTPN2-203ENST00000353319 COA1Q9GZY4 146 aa12.32□□□□□ -0.44
PTPN2-203ENST00000353319 GRPEL1Q9HAV7 217 aa12.32□□□□□ -0.44
PTPN2-203ENST00000353319 FAM217BQ9NTX9 383 aaPredicted RBP12.32□□□□□ -0.44
PTPN2-203ENST00000353319 AATFQ9NY61 560 aaKnown RBP eCLIP12.32□□□□□ -0.44
PTPN2-203ENST00000353319 ORC3Q9UBD5 711 aaPredicted RBP12.32□□□□□ -0.44
PTPN2-203ENST00000353319 ARPP21Q9UBL0 812 aaPredicted RBP12.32□□□□□ -0.44
PTPN2-203ENST00000353319 CFAP45Q9UL16 551 aa12.32□□□□□ -0.44
PTPN2-203ENST00000353319 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.32□□□□□ -0.44
PTPN2-203ENST00000353319 SLC12A7Q9Y666 1083 aa12.32□□□□□ -0.44
PTPN2-203ENST00000353319 ERICH2A1L162 156 aa12.31□□□□□ -0.44
PTPN2-203ENST00000353319 CCDC69A6NI79 296 aa12.31□□□□□ -0.44
PTPN2-203ENST00000353319 USP17L12C9JPN9 530 aa12.31□□□□□ -0.44
PTPN2-203ENST00000353319 USP17L21D6R901 530 aa12.31□□□□□ -0.44
PTPN2-203ENST00000353319 FIBPO43427 364 aa12.31□□□□□ -0.44
PTPN2-203ENST00000353319 ADD1P35611 737 aaKnown RBP12.31□□□□□ -0.44
PTPN2-203ENST00000353319 WTAPQ15007 396 aa12.31□□□□□ -0.44
PTPN2-203ENST00000353319 SEC23AQ15436 765 aa12.31□□□□□ -0.44
PTPN2-203ENST00000353319 NTRK3Q16288 839 aa12.31□□□□□ -0.44
PTPN2-203ENST00000353319 SLC15A2Q16348 729 aa12.31□□□□□ -0.44
PTPN2-203ENST00000353319 SYNE3Q6ZMZ3 975 aa12.31□□□□□ -0.44
PTPN2-203ENST00000353319 TTC6Q86TZ1 520 aa12.31□□□□□ -0.44
PTPN2-203ENST00000353319 FBXO18Q8NFZ0 1043 aa12.31□□□□□ -0.44
PTPN2-203ENST00000353319 SENP2Q9HC62 589 aa12.31□□□□□ -0.44
PTPN2-203ENST00000353319 SUGT1Q9Y2Z0 365 aa12.31□□□□□ -0.44
PTPN2-203ENST00000353319 LETM1O95202 739 aaPredicted RBP12.3□□□□□ -0.44
PTPN2-203ENST00000353319 SLC3A2P08195 630 aaKnown RBP12.3□□□□□ -0.44
PTPN2-203ENST00000353319 RRP12Q5JTH9 1297 aaKnown RBP12.3□□□□□ -0.44
PTPN2-203ENST00000353319 LRSAM1Q6UWE0 723 aa12.3□□□□□ -0.44
PTPN2-203ENST00000353319 NFXL1Q6ZNB6 911 aa12.3□□□□□ -0.44
PTPN2-203ENST00000353319 SLF2Q8IX21 1173 aa12.3□□□□□ -0.44
PTPN2-203ENST00000353319 GPR101Q96P66 508 aaPredicted RBP12.3□□□□□ -0.44
PTPN2-203ENST00000353319 RBM27Q9P2N5 1060 aaKnown RBP12.3□□□□□ -0.44
PTPN2-203ENST00000353319 QSER1Q2KHR3 1735 aa12.3□□□□□ -0.44
PTPN2-203ENST00000353319 MROH7-TTC4A0A0A0MT08 1334 aa12.29□□□□□ -0.44
PTPN2-203ENST00000353319 STK36Q9NRP7 1315 aa12.29□□□□□ -0.44
PTPN2-203ENST00000353319 GPR75-ASB3A0A0A6YYF3 556 aa12.29□□□□□ -0.44
PTPN2-203ENST00000353319 CCDC196A0A1B0GTZ2 297 aa12.29□□□□□ -0.44
PTPN2-203ENST00000353319 C6orf229H3BNL8 230 aa12.29□□□□□ -0.44
PTPN2-203ENST00000353319 IFNAR1P17181 557 aa12.29□□□□□ -0.44
PTPN2-203ENST00000353319 CDC27P30260 824 aa12.29□□□□□ -0.44
PTPN2-203ENST00000353319 GRIK5Q16478 980 aa12.29□□□□□ -0.44
PTPN2-203ENST00000353319 STYK1Q6J9G0 422 aa12.29□□□□□ -0.44
PTPN2-203ENST00000353319 FAM173BQ6P4H8 233 aa12.29□□□□□ -0.44
PTPN2-203ENST00000353319 MPNDQ8N594 471 aa12.29□□□□□ -0.44
PTPN2-203ENST00000353319 LEO1Q8WVC0 666 aaPredicted RBP12.29□□□□□ -0.44
PTPN2-203ENST00000353319 C8orf76Q96K31 380 aa12.29□□□□□ -0.44
PTPN2-203ENST00000353319 ZNF396Q96N95 335 aaPredicted RBP12.29□□□□□ -0.44
PTPN2-203ENST00000353319 UBAC1Q9BSL1 405 aa12.29□□□□□ -0.44
PTPN2-203ENST00000353319 TOMM22Q9NS69 142 aa12.29□□□□□ -0.44
PTPN2-203ENST00000353319 RCOR1Q9UKL0 485 aa12.29□□□□□ -0.44
PTPN2-203ENST00000353319 BAZ2AQ9UIF9 1905 aaKnown RBP12.29□□□□□ -0.44
PTPN2-203ENST00000353319 GOLGA8AA7E2F4 631 aa12.28□□□□□ -0.44
PTPN2-203ENST00000353319 PLCG2P16885 1265 aa12.28□□□□□ -0.44
PTPN2-203ENST00000353319 EZH2Q15910 746 aaKnown RBP12.28□□□□□ -0.44
PTPN2-203ENST00000353319 CCDC183Q5T5S1 534 aa12.28□□□□□ -0.44
PTPN2-203ENST00000353319 IQCA1Q86XH1 822 aa12.28□□□□□ -0.44
PTPN2-203ENST00000353319 SPATA32Q96LK8 384 aa12.28□□□□□ -0.44
PTPN2-203ENST00000353319 ZSCAN10Q96SZ4 725 aaPredicted RBP12.28□□□□□ -0.44
PTPN2-203ENST00000353319 NOL10Q9BSC4 688 aaKnown RBP12.28□□□□□ -0.44
PTPN2-203ENST00000353319 RTFDC1Q9BY42 306 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms