RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 GOLGA6L9A6NEM1 432 aa12.1□□□□□ -0.47
CAPN3-203ENST00000349748 AGPSO00116 658 aa12.1□□□□□ -0.47
CAPN3-203ENST00000349748 ECEL1O95672 775 aa12.1□□□□□ -0.47
CAPN3-203ENST00000349748 CDR1P51861 262 aa12.1□□□□□ -0.47
CAPN3-203ENST00000349748 FAM160A1Q05DH4 1040 aa12.1□□□□□ -0.47
CAPN3-203ENST00000349748 PPFIA1Q13136 1202 aa12.1□□□□□ -0.47
CAPN3-203ENST00000349748 NUTM2GQ5VZR2 741 aa12.1□□□□□ -0.47
CAPN3-203ENST00000349748 HSD3B7Q9H2F3 369 aa12.1□□□□□ -0.47
CAPN3-203ENST00000349748 RAB11FIP3O75154 756 aa12.1□□□□□ -0.47
CAPN3-203ENST00000349748 SLC5A9Q2M3M2 681 aa12.1□□□□□ -0.47
CAPN3-203ENST00000349748 BRF1Q92994 677 aa12.1□□□□□ -0.47
CAPN3-203ENST00000349748 DLG5Q8TDM6 1919 aa12.1□□□□□ -0.47
CAPN3-203ENST00000349748 TMEM94Q12767 1356 aa12.1□□□□□ -0.47
CAPN3-203ENST00000349748 PNMA6EA0A0J9YXQ4 647 aa12.09□□□□□ -0.47
CAPN3-203ENST00000349748 IL13P35225 146 aa12.09□□□□□ -0.47
CAPN3-203ENST00000349748 LMOD2Q6P5Q4 547 aa12.09□□□□□ -0.47
CAPN3-203ENST00000349748 NME9Q86XW9 330 aa12.09□□□□□ -0.47
CAPN3-203ENST00000349748 PARP9Q8IXQ6 854 aa12.09□□□□□ -0.47
CAPN3-203ENST00000349748 RPUSD2Q8IZ73 545 aaKnown RBP12.09□□□□□ -0.47
CAPN3-203ENST00000349748 ORAI2Q96SN7 254 aa12.09□□□□□ -0.47
CAPN3-203ENST00000349748 VCPKMTQ9H867 229 aa12.09□□□□□ -0.47
CAPN3-203ENST00000349748 A0A1B0GVL5 298 aa12.09□□□□□ -0.47
CAPN3-203ENST00000349748 CTAGE15A4D2H0 777 aa12.09□□□□□ -0.47
CAPN3-203ENST00000349748 F6X3S4 739 aa12.09□□□□□ -0.47
CAPN3-203ENST00000349748 CTAGE8P0CG41 777 aa12.09□□□□□ -0.47
CAPN3-203ENST00000349748 ME1P48163 572 aa12.09□□□□□ -0.47
CAPN3-203ENST00000349748 PDCLQ13371 301 aa12.09□□□□□ -0.47
CAPN3-203ENST00000349748 SF3B2Q13435 895 aaKnown RBP12.09□□□□□ -0.47
CAPN3-203ENST00000349748 ZNF569Q5MCW4 686 aa12.09□□□□□ -0.47
CAPN3-203ENST00000349748 CCDC181Q5TID7 509 aa12.09□□□□□ -0.47
CAPN3-203ENST00000349748 B4GALNT4Q76KP1 1039 aa12.09□□□□□ -0.47
CAPN3-203ENST00000349748 CTAGE6Q86UF2 777 aa12.09□□□□□ -0.47
CAPN3-203ENST00000349748 VSTM4Q8IW00 320 aa12.09□□□□□ -0.47
CAPN3-203ENST00000349748 CTAGE4Q8IX94 777 aa12.09□□□□□ -0.47
CAPN3-203ENST00000349748 VIPAS39Q9H9C1 493 aa12.09□□□□□ -0.47
CAPN3-203ENST00000349748 ATP6V0A4Q9HBG4 840 aa12.09□□□□□ -0.47
CAPN3-203ENST00000349748 STAP2Q9UGK3 403 aa12.09□□□□□ -0.47
CAPN3-203ENST00000349748 TPX2Q9ULW0 747 aaKnown RBP12.09□□□□□ -0.47
CAPN3-203ENST00000349748 H3BQV1 296 aa12.09□□□□□ -0.47
CAPN3-203ENST00000349748 CSB-PGBD3P0DP91 1061 aa12.09□□□□□ -0.47
CAPN3-203ENST00000349748 ATF3P18847 181 aa12.09□□□□□ -0.47
CAPN3-203ENST00000349748 USP4Q13107 963 aa12.09□□□□□ -0.47
CAPN3-203ENST00000349748 IFFO2Q5TF58 517 aa12.09□□□□□ -0.47
CAPN3-203ENST00000349748 HINFPQ9BQA5 517 aa12.09□□□□□ -0.47
CAPN3-203ENST00000349748 YIPF3Q9GZM5 350 aa12.09□□□□□ -0.47
CAPN3-203ENST00000349748 SIL1Q9H173 461 aa12.09□□□□□ -0.47
CAPN3-203ENST00000349748 LMCD1Q9NZU5 365 aa12.09□□□□□ -0.47
CAPN3-203ENST00000349748 CFAP45Q9UL16 551 aa12.09□□□□□ -0.47
CAPN3-203ENST00000349748 EPB41L2O43491 1005 aaKnown RBP12.08□□□□□ -0.48
CAPN3-203ENST00000349748 FOXO3O43524 673 aa12.08□□□□□ -0.48
CAPN3-203ENST00000349748 ARHGAP25P42331 645 aa12.08□□□□□ -0.48
CAPN3-203ENST00000349748 CYB5D1Q6P9G0 228 aa12.08□□□□□ -0.48
CAPN3-203ENST00000349748 CADPS2Q86UW7 1296 aa12.08□□□□□ -0.48
CAPN3-203ENST00000349748 DRAXINQ8NBI3 349 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-203ENST00000349748 CRACR2AQ9BSW2 395 aa12.08□□□□□ -0.48
CAPN3-203ENST00000349748 KIAA1468Q9P260 1216 aa12.08□□□□□ -0.48
CAPN3-203ENST00000349748 BIN2Q9UBW5 565 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-203ENST00000349748 FBXO3Q9UK99 471 aa12.08□□□□□ -0.48
CAPN3-203ENST00000349748 CPS1P31327 1500 aa12.08□□□□□ -0.48
CAPN3-203ENST00000349748 ADD1P35611 737 aaKnown RBP12.08□□□□□ -0.48
CAPN3-203ENST00000349748 NCAPH2Q6IBW4 605 aa12.08□□□□□ -0.48
CAPN3-203ENST00000349748 RCSD1Q6JBY9 416 aa12.08□□□□□ -0.48
CAPN3-203ENST00000349748 COG1Q8WTW3 980 aa12.08□□□□□ -0.48
CAPN3-203ENST00000349748 USP28Q96RU2 1077 aa12.08□□□□□ -0.48
CAPN3-203ENST00000349748 SLC39A2Q9NP94 309 aa12.08□□□□□ -0.48
CAPN3-203ENST00000349748 ZEB2O60315 1214 aa12.07□□□□□ -0.48
CAPN3-203ENST00000349748 PFKFB2O60825 505 aa12.07□□□□□ -0.48
CAPN3-203ENST00000349748 GIGYF1O75420 1035 aaPredicted RBP12.07□□□□□ -0.48
CAPN3-203ENST00000349748 DNAJC14Q6Y2X3 702 aaPredicted RBP12.07□□□□□ -0.48
CAPN3-203ENST00000349748 TTLL7Q6ZT98 887 aa12.07□□□□□ -0.48
CAPN3-203ENST00000349748 DDX17Q92841 729 aaKnown RBP12.07□□□□□ -0.48
CAPN3-203ENST00000349748 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.07□□□□□ -0.48
CAPN3-203ENST00000349748 OPLAHO14841 1288 aa12.07□□□□□ -0.48
CAPN3-203ENST00000349748 MYO1BO43795 1136 aa12.07□□□□□ -0.48
CAPN3-203ENST00000349748 IFT88Q13099 833 aa12.07□□□□□ -0.48
CAPN3-203ENST00000349748 MTA1Q13330 715 aa12.07□□□□□ -0.48
CAPN3-203ENST00000349748 TBC1D31Q96DN5 1066 aa12.07□□□□□ -0.48
CAPN3-203ENST00000349748 C19orf44Q9H6X5 657 aa12.07□□□□□ -0.48
CAPN3-203ENST00000349748 INTS13Q9NVM9 706 aa12.07□□□□□ -0.48
CAPN3-203ENST00000349748 SOWAHDA6NJG2 315 aa12.06□□□□□ -0.48
CAPN3-203ENST00000349748 PPFIA3O75145 1194 aa12.06□□□□□ -0.48
CAPN3-203ENST00000349748 SLC8A3P57103 927 aa12.06□□□□□ -0.48
CAPN3-203ENST00000349748 RRS1Q15050 365 aaKnown RBP12.06□□□□□ -0.48
CAPN3-203ENST00000349748 OR8K1Q8NGG5 319 aa12.06□□□□□ -0.48
CAPN3-203ENST00000349748 CCDC114Q96M63 670 aa12.06□□□□□ -0.48
CAPN3-203ENST00000349748 HAUS2Q9NVX0 235 aa12.06□□□□□ -0.48
CAPN3-203ENST00000349748 DIP2AQ14689 1571 aa12.06□□□□□ -0.48
CAPN3-203ENST00000349748 NDUFA8P51970 172 aa12.06□□□□□ -0.48
CAPN3-203ENST00000349748 PDCD2Q16342 344 aaPredicted RBP12.06□□□□□ -0.48
CAPN3-203ENST00000349748 CAPRIN2Q6IMN6 1127 aaKnown RBP12.06□□□□□ -0.48
CAPN3-203ENST00000349748 WDR93Q6P2C0 686 aa12.06□□□□□ -0.48
CAPN3-203ENST00000349748 TC2NQ8N9U0 490 aa12.06□□□□□ -0.48
CAPN3-203ENST00000349748 CDC5LQ99459 802 aaKnown RBP12.06□□□□□ -0.48
CAPN3-203ENST00000349748 BPIFA3Q9BQP9 254 aa12.06□□□□□ -0.48
CAPN3-203ENST00000349748 RCOR1Q9UKL0 485 aa12.06□□□□□ -0.48
CAPN3-203ENST00000349748 PHF8Q9UPP1 1060 aa12.06□□□□□ -0.48
CAPN3-203ENST00000349748 ADGRL3Q9HAR2 1447 aa12.06□□□□□ -0.48
CAPN3-203ENST00000349748 KIF5CO60282 957 aa12.06□□□□□ -0.48
CAPN3-203ENST00000349748 ABL1P00519 1130 aa12.06□□□□□ -0.48
CAPN3-203ENST00000349748 MYBL1P10243 752 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms