RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 IRX2Q9BZI1 471 aaPredicted RBP21.37■■□□□ 1.01
SCARF1-202ENST00000348987 SUGCTQ9HAC7 445 aa21.37■■□□□ 1.01
SCARF1-202ENST00000348987 TOMM22Q9NS69 142 aa21.37■■□□□ 1.01
SCARF1-202ENST00000348987 GEMIN8Q9NWZ8 242 aaKnown RBP21.37■■□□□ 1.01
SCARF1-202ENST00000348987 PFKFB1P16118 471 aa21.37■■□□□ 1.01
SCARF1-202ENST00000348987 MAGEA9P43362 315 aa21.37■■□□□ 1.01
SCARF1-202ENST00000348987 MYL5Q02045 173 aa21.37■■□□□ 1.01
SCARF1-202ENST00000348987 KARSQ15046 597 aaKnown RBP21.37■■□□□ 1.01
SCARF1-202ENST00000348987 RAB11FIP4Q86YS3 637 aa21.37■■□□□ 1.01
SCARF1-202ENST00000348987 SYNE4Q8N205 404 aa21.37■■□□□ 1.01
SCARF1-202ENST00000348987 CCDC12Q8WUD4 166 aaPredicted RBP21.37■■□□□ 1.01
SCARF1-202ENST00000348987 FAN1Q9Y2M0 1017 aa21.37■■□□□ 1.01
SCARF1-202ENST00000348987 CPDO75976 1380 aa21.37■■□□□ 1.01
SCARF1-202ENST00000348987 EIF3CLB5ME19 914 aaKnown RBP21.36■■□□□ 1.01
SCARF1-202ENST00000348987 BEND6Q5SZJ8 279 aaPredicted RBP21.36■■□□□ 1.01
SCARF1-202ENST00000348987 WWC2Q6AWC2 1192 aa21.36■■□□□ 1.01
SCARF1-202ENST00000348987 EIF3CQ99613 913 aaKnown RBP21.36■■□□□ 1.01
SCARF1-202ENST00000348987 DESI2Q9BSY9 194 aa21.36■■□□□ 1.01
SCARF1-202ENST00000348987 FANCLQ9NW38 375 aa21.36■■□□□ 1.01
SCARF1-202ENST00000348987 PKD1L3Q7Z443 1732 aa21.36■■□□□ 1.01
SCARF1-202ENST00000348987 FAM89AQ96GI7 184 aa21.36■■□□□ 1.01
SCARF1-202ENST00000348987 PUF60Q9UHX1 559 aaKnown RBP21.36■■□□□ 1.01
SCARF1-202ENST00000348987 LAMA4Q16363 1823 aa21.35■■□□□ 1.01
SCARF1-202ENST00000348987 KDM4FA0A1W2PPD8 638 aa21.35■■□□□ 1.01
SCARF1-202ENST00000348987 GOLGA6L9A6NEM1 432 aa21.35■■□□□ 1.01
SCARF1-202ENST00000348987 ADKP55263 362 aaKnown RBP21.35■■□□□ 1.01
SCARF1-202ENST00000348987 ANKZF1Q9H8Y5 726 aa21.35■■□□□ 1.01
SCARF1-202ENST00000348987 GJB4Q9NTQ9 266 aa21.35■■□□□ 1.01
SCARF1-202ENST00000348987 INTS13Q9NVM9 706 aa21.35■■□□□ 1.01
SCARF1-202ENST00000348987 PCDH11XQ9BZA7 1347 aa21.35■■□□□ 1.01
SCARF1-202ENST00000348987 PCDH11YQ9BZA8 1340 aa21.35■■□□□ 1.01
SCARF1-202ENST00000348987 LOC102724159A0A0B4J2E5 919 aa21.35■■□□□ 1.01
SCARF1-202ENST00000348987 IL2RBP14784 551 aa21.35■■□□□ 1.01
SCARF1-202ENST00000348987 CHMP4BP1P59074 171 aa21.35■■□□□ 1.01
SCARF1-202ENST00000348987 PWP2Q15269 919 aaKnown RBP21.35■■□□□ 1.01
SCARF1-202ENST00000348987 CEP126Q9P2H0 1117 aa21.35■■□□□ 1.01
SCARF1-202ENST00000348987 WASHC4Q2M389 1173 aa21.34■■□□□ 1.01
SCARF1-202ENST00000348987 HDXQ7Z353 690 aa21.34■■□□□ 1.01
SCARF1-202ENST00000348987 POLR3EQ9NVU0 708 aa21.34■■□□□ 1.01
SCARF1-202ENST00000348987 XAGE2Q96GT9 111 aa21.34■■□□□ 1.01
SCARF1-202ENST00000348987 DRC1Q96MC2 740 aa21.34■■□□□ 1.01
SCARF1-202ENST00000348987 PNKPQ96T60 521 aa21.34■■□□□ 1.01
SCARF1-202ENST00000348987 KAT6BQ8WYB5 2073 aa21.34■■□□□ 1.01
SCARF1-202ENST00000348987 PHACTR2O75167 634 aa21.33■■□□□ 1.01
SCARF1-202ENST00000348987 AXDND1Q5T1B0 1012 aaPredicted RBP21.33■■□□□ 1.01
SCARF1-202ENST00000348987 SOS2Q07890 1332 aaPredicted RBP21.33■■□□□ 1.01
SCARF1-202ENST00000348987 YEATS4O95619 227 aa21.33■■□□□ 1
SCARF1-202ENST00000348987 GUCY2CP25092 1073 aa21.33■■□□□ 1
SCARF1-202ENST00000348987 MARCKSP29966 332 aaPredicted RBP21.33■■□□□ 1
SCARF1-202ENST00000348987 CCDC57Q2TAC2 916 aa21.33■■□□□ 1
SCARF1-202ENST00000348987 HNRNPLLQ8WVV9 542 aaKnown RBP21.33■■□□□ 1
SCARF1-202ENST00000348987 PUS7LQ9H0K6 701 aaKnown RBP21.33■■□□□ 1
SCARF1-202ENST00000348987 MROH7-TTC4A0A0A0MT08 1334 aa21.33■■□□□ 1
SCARF1-202ENST00000348987 TJP1Q07157 1748 aa21.33■■□□□ 1
SCARF1-202ENST00000348987 ERVV-2B6SEH9 535 aa21.32■■□□□ 1
SCARF1-202ENST00000348987 STX10O60499 249 aa21.32■■□□□ 1
SCARF1-202ENST00000348987 PNOCQ13519 176 aa21.32■■□□□ 1
SCARF1-202ENST00000348987 MYSM1Q5VVJ2 828 aa21.32■■□□□ 1
SCARF1-202ENST00000348987 SRGAP1Q7Z6B7 1085 aa21.32■■□□□ 1
SCARF1-202ENST00000348987 ABCB6Q9NP58 842 aa21.32■■□□□ 1
SCARF1-202ENST00000348987 ASAP1Q9ULH1 1129 aa21.32■■□□□ 1
SCARF1-202ENST00000348987 COL5A2P05997 1499 aaPredicted RBP21.32■■□□□ 1
SCARF1-202ENST00000348987 CUTAO60888 179 aa21.32■■□□□ 1
SCARF1-202ENST00000348987 WDHD1O75717 1129 aaPredicted RBP21.32■■□□□ 1
SCARF1-202ENST00000348987 FGAP02671 866 aa21.32■■□□□ 1
SCARF1-202ENST00000348987 ZAP70P43403 619 aa21.32■■□□□ 1
SCARF1-202ENST00000348987 TC2NQ8N9U0 490 aa21.32■■□□□ 1
SCARF1-202ENST00000348987 PLEKHA4Q9H4M7 779 aa21.32■■□□□ 1
SCARF1-202ENST00000348987 TUBE1Q9UJT0 475 aa21.32■■□□□ 1
SCARF1-202ENST00000348987 DENND2AQ9ULE3 1009 aa21.32■■□□□ 1
SCARF1-202ENST00000348987 AKAP2Q9Y2D5 859 aa21.32■■□□□ 1
SCARF1-202ENST00000348987 KCPQ6ZWJ8 1503 aa21.32■■□□□ 1
SCARF1-202ENST00000348987 RPS6KA5O75582 802 aa21.31■■□□□ 1
SCARF1-202ENST00000348987 CIAO1O76071 339 aa21.31■■□□□ 1
SCARF1-202ENST00000348987 CMA1P23946 247 aa21.31■■□□□ 1
SCARF1-202ENST00000348987 ZNF274Q96GC6 653 aaPredicted RBP21.31■■□□□ 1
SCARF1-202ENST00000348987 MRPL44Q9H9J2 332 aaKnown RBP21.31■■□□□ 1
SCARF1-202ENST00000348987 L1RE1Q9UN81 338 aa21.31■■□□□ 1
SCARF1-202ENST00000348987 TTC39AQ5SRH9 613 aa21.31■■□□□ 1
SCARF1-202ENST00000348987 SYNE3Q6ZMZ3 975 aa21.31■■□□□ 1
SCARF1-202ENST00000348987 NKX2-3Q8TAU0 364 aa21.31■■□□□ 1
SCARF1-202ENST00000348987 ISCA1Q9BUE6 129 aa21.31■■□□□ 1
SCARF1-202ENST00000348987 BRMS1Q9HCU9 246 aa21.31■■□□□ 1
SCARF1-202ENST00000348987 LAMB4A4D0S4 1761 aa21.3■■□□□ 1
SCARF1-202ENST00000348987 TBX2Q13207 712 aaPredicted RBP21.3■■□□□ 1
SCARF1-202ENST00000348987 MTF1Q14872 753 aa21.3■■□□□ 1
SCARF1-202ENST00000348987 LRRC31Q6UY01 552 aa21.3■■□□□ 1
SCARF1-202ENST00000348987 C8orf76Q96K31 380 aa21.3■■□□□ 1
SCARF1-202ENST00000348987 LZTFL1Q9NQ48 299 aa21.3■■□□□ 1
SCARF1-202ENST00000348987 STRCQ7RTU9 1775 aa21.3■■□□□ 1
SCARF1-202ENST00000348987 EIF3JO75822 258 aaKnown RBP21.3■■□□□ 1
SCARF1-202ENST00000348987 SYKP43405 635 aa21.3■■□□□ 1
SCARF1-202ENST00000348987 CCDC102AQ96A19 550 aa21.3■■□□□ 1
SCARF1-202ENST00000348987 TCIRG1Q13488 830 aa21.29■■□□□ 1
SCARF1-202ENST00000348987 NUP188Q5SRE5 1749 aa21.29■■□□□ 1
SCARF1-202ENST00000348987 KIF28PB7ZC32 967 aa21.29■■□□□ 1
SCARF1-202ENST00000348987 USP5P45974 858 aa21.29■■□□□ 1
SCARF1-202ENST00000348987 ANO1Q5XXA6 986 aa21.29■■□□□ 1
SCARF1-202ENST00000348987 TEX2Q8IWB9 1127 aa21.29■■□□□ 1
SCARF1-202ENST00000348987 CORO7P57737 925 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms