RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 CTCFLQ8NI51 663 aaPredicted RBP11.78□□□□□ -0.52
CHRNA1-202ENST00000348749 AFAP1L1Q8TED9 768 aa11.78□□□□□ -0.52
CHRNA1-202ENST00000348749 CCDC102AQ96A19 550 aa11.78□□□□□ -0.52
CHRNA1-202ENST00000348749 EDC3Q96F86 508 aaKnown RBP11.78□□□□□ -0.52
CHRNA1-202ENST00000348749 DBNDD2Q9BQY9 259 aa11.78□□□□□ -0.52
CHRNA1-202ENST00000348749 C19orf44Q9H6X5 657 aa11.78□□□□□ -0.52
CHRNA1-202ENST00000348749 PAG1Q9NWQ8 432 aa11.78□□□□□ -0.52
CHRNA1-202ENST00000348749 DDX60Q8IY21 1712 aaKnown RBP11.78□□□□□ -0.52
CHRNA1-202ENST00000348749 USP8P40818 1118 aa11.78□□□□□ -0.52
CHRNA1-202ENST00000348749 IL15P40933 162 aaPredicted RBP11.78□□□□□ -0.52
CHRNA1-202ENST00000348749 CASP7P55210 303 aa11.78□□□□□ -0.52
CHRNA1-202ENST00000348749 SPECC1LQ69YQ0 1117 aa11.78□□□□□ -0.52
CHRNA1-202ENST00000348749 WDR93Q6P2C0 686 aa11.78□□□□□ -0.52
CHRNA1-202ENST00000348749 KLHDC4Q8TBB5 520 aa11.78□□□□□ -0.52
CHRNA1-202ENST00000348749 MRPL44Q9H9J2 332 aaKnown RBP11.78□□□□□ -0.52
CHRNA1-202ENST00000348749 ABCC12Q96J65 1359 aa11.77□□□□□ -0.52
CHRNA1-202ENST00000348749 KDM6AO15550 1401 aaPredicted RBP11.77□□□□□ -0.52
CHRNA1-202ENST00000348749 SHOX2O60902 331 aaPredicted RBP11.77□□□□□ -0.53
CHRNA1-202ENST00000348749 ERLIN2O94905 339 aa11.77□□□□□ -0.53
CHRNA1-202ENST00000348749 PRPF6O94906 941 aaKnown RBP11.77□□□□□ -0.53
CHRNA1-202ENST00000348749 ATP6V1AP38606 617 aa11.77□□□□□ -0.53
CHRNA1-202ENST00000348749 VSNL1P62760 191 aa11.77□□□□□ -0.53
CHRNA1-202ENST00000348749 KARSQ15046 597 aaKnown RBP11.77□□□□□ -0.53
CHRNA1-202ENST00000348749 CCDC129Q6ZRS4 1044 aa11.77□□□□□ -0.53
CHRNA1-202ENST00000348749 MICALL1Q8N3F8 863 aa11.77□□□□□ -0.53
CHRNA1-202ENST00000348749 ANKRD20A12PQ8NF67 263 aa11.77□□□□□ -0.53
CHRNA1-202ENST00000348749 PLBD2Q8NHP8 589 aa11.77□□□□□ -0.53
CHRNA1-202ENST00000348749 ZSWIM4Q9H7M6 989 aa11.77□□□□□ -0.53
CHRNA1-202ENST00000348749 SUGCTQ9HAC7 445 aa11.77□□□□□ -0.53
CHRNA1-202ENST00000348749 PUF60Q9UHX1 559 aaKnown RBP11.77□□□□□ -0.53
CHRNA1-202ENST00000348749 ZNF142P52746 1687 aaPredicted RBP11.76□□□□□ -0.53
CHRNA1-202ENST00000348749 FAM237AA0A1B0GTK4 181 aa11.76□□□□□ -0.53
CHRNA1-202ENST00000348749 LRRIQ3A6PVS8 624 aaPredicted RBP11.76□□□□□ -0.53
CHRNA1-202ENST00000348749 RNF113AO15541 343 aaKnown RBP11.76□□□□□ -0.53
CHRNA1-202ENST00000348749 RNF40O75150 1001 aa11.76□□□□□ -0.53
CHRNA1-202ENST00000348749 CIAO1O76071 339 aa11.76□□□□□ -0.53
CHRNA1-202ENST00000348749 ZFYP08048 801 aaPredicted RBP11.76□□□□□ -0.53
CHRNA1-202ENST00000348749 HSPD1P10809 573 aaKnown RBP11.76□□□□□ -0.53
CHRNA1-202ENST00000348749 MAP2K2P36507 400 aa11.76□□□□□ -0.53
CHRNA1-202ENST00000348749 GUCY1B3Q02153 619 aa11.76□□□□□ -0.53
CHRNA1-202ENST00000348749 WHAMMP3Q1A5X7 153 aa11.76□□□□□ -0.53
CHRNA1-202ENST00000348749 ESCO1Q5FWF5 840 aa11.76□□□□□ -0.53
CHRNA1-202ENST00000348749 MYSM1Q5VVJ2 828 aa11.76□□□□□ -0.53
CHRNA1-202ENST00000348749 OLFM4Q6UX06 510 aa11.76□□□□□ -0.53
CHRNA1-202ENST00000348749 RAPGEF4Q8WZA2 1011 aa11.76□□□□□ -0.53
CHRNA1-202ENST00000348749 PANX2Q96RD6 677 aa11.76□□□□□ -0.53
CHRNA1-202ENST00000348749 SEC62Q99442 399 aaKnown RBP11.76□□□□□ -0.53
CHRNA1-202ENST00000348749 FANCLQ9NW38 375 aa11.76□□□□□ -0.53
CHRNA1-202ENST00000348749 FBXO3Q9UK99 471 aa11.76□□□□□ -0.53
CHRNA1-202ENST00000348749 HPSEQ9Y251 543 aa11.76□□□□□ -0.53
CHRNA1-202ENST00000348749 PARP4Q9UKK3 1724 aaKnown RBP11.76□□□□□ -0.53
CHRNA1-202ENST00000348749 ANKRD65E5RJM6 399 aa11.76□□□□□ -0.53
CHRNA1-202ENST00000348749 KIF5CO60282 957 aa11.76□□□□□ -0.53
CHRNA1-202ENST00000348749 PIP4K2BP78356 416 aa11.76□□□□□ -0.53
CHRNA1-202ENST00000348749 DDX46Q7L014 1031 aaKnown RBP11.76□□□□□ -0.53
CHRNA1-202ENST00000348749 BANK1Q8NDB2 785 aa11.76□□□□□ -0.53
CHRNA1-202ENST00000348749 KAT2BQ92831 832 aa11.76□□□□□ -0.53
CHRNA1-202ENST00000348749 TACO1Q9BSH4 297 aaKnown RBP11.76□□□□□ -0.53
CHRNA1-202ENST00000348749 NAA15Q9BXJ9 866 aaKnown RBP11.76□□□□□ -0.53
CHRNA1-202ENST00000348749 LRRC2Q9BYS8 371 aa11.76□□□□□ -0.53
CHRNA1-202ENST00000348749 MROH7-TTC4A0A0A0MT08 1334 aa11.75□□□□□ -0.53
CHRNA1-202ENST00000348749 PKD1L3Q7Z443 1732 aa11.75□□□□□ -0.53
CHRNA1-202ENST00000348749 A0A087WZG4 1122 aa11.75□□□□□ -0.53
CHRNA1-202ENST00000348749 H7C1W4 665 aa11.75□□□□□ -0.53
CHRNA1-202ENST00000348749 SYF2O95926 243 aaKnown RBP11.75□□□□□ -0.53
CHRNA1-202ENST00000348749 FDPSP14324 419 aaKnown RBP11.75□□□□□ -0.53
CHRNA1-202ENST00000348749 PHKG2P15735 406 aa11.75□□□□□ -0.53
CHRNA1-202ENST00000348749 SYKP43405 635 aa11.75□□□□□ -0.53
CHRNA1-202ENST00000348749 CCT2P78371 535 aaKnown RBP11.75□□□□□ -0.53
CHRNA1-202ENST00000348749 WWC2Q6AWC2 1192 aa11.75□□□□□ -0.53
CHRNA1-202ENST00000348749 UBE3BQ7Z3V4 1068 aa11.75□□□□□ -0.53
CHRNA1-202ENST00000348749 ELOA2Q8IYF1 753 aaPredicted RBP11.75□□□□□ -0.53
CHRNA1-202ENST00000348749 PDILTQ8N807 584 aa11.75□□□□□ -0.53
CHRNA1-202ENST00000348749 DESI2Q9BSY9 194 aa11.75□□□□□ -0.53
CHRNA1-202ENST00000348749 A1CFQ9NQ94 594 aaKnown RBP11.75□□□□□ -0.53
CHRNA1-202ENST00000348749 ADGRG1Q9Y653 693 aa11.75□□□□□ -0.53
CHRNA1-202ENST00000348749 CTAGE15A4D2H0 777 aa11.74□□□□□ -0.53
CHRNA1-202ENST00000348749 CTAGE9A4FU28 777 aa11.74□□□□□ -0.53
CHRNA1-202ENST00000348749 EXOC5O00471 708 aa11.74□□□□□ -0.53
CHRNA1-202ENST00000348749 CTAGE8P0CG41 777 aa11.74□□□□□ -0.53
CHRNA1-202ENST00000348749 MYL6BP14649 208 aa11.74□□□□□ -0.53
CHRNA1-202ENST00000348749 ZNF18P17022 549 aa11.74□□□□□ -0.53
CHRNA1-202ENST00000348749 TATP17735 454 aaPredicted RBP11.74□□□□□ -0.53
CHRNA1-202ENST00000348749 ADKP55263 362 aaKnown RBP11.74□□□□□ -0.53
CHRNA1-202ENST00000348749 ANO1Q5XXA6 986 aa11.74□□□□□ -0.53
CHRNA1-202ENST00000348749 ISM2Q6H9L7 571 aa11.74□□□□□ -0.53
CHRNA1-202ENST00000348749 CTAGE6Q86UF2 777 aa11.74□□□□□ -0.53
CHRNA1-202ENST00000348749 POTEDQ86YR6 584 aa11.74□□□□□ -0.53
CHRNA1-202ENST00000348749 CTAGE4Q8IX94 777 aa11.74□□□□□ -0.53
CHRNA1-202ENST00000348749 IFNL2Q8IZJ0 200 aa11.74□□□□□ -0.53
CHRNA1-202ENST00000348749 TTC5Q8N0Z6 440 aa11.74□□□□□ -0.53
CHRNA1-202ENST00000348749 JMYQ8N9B5 988 aa11.74□□□□□ -0.53
CHRNA1-202ENST00000348749 DCAF5Q96JK2 942 aa11.74□□□□□ -0.53
CHRNA1-202ENST00000348749 C8orf76Q96K31 380 aa11.74□□□□□ -0.53
CHRNA1-202ENST00000348749 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.74□□□□□ -0.53
CHRNA1-202ENST00000348749 RGPD5Q99666 1765 aa11.74□□□□□ -0.53
CHRNA1-202ENST00000348749 CDHR2Q9BYE9 1310 aa11.74□□□□□ -0.53
CHRNA1-202ENST00000348749 NUP188Q5SRE5 1749 aa11.74□□□□□ -0.53
CHRNA1-202ENST00000348749 GOLIM4O00461 696 aa11.74□□□□□ -0.53
CHRNA1-202ENST00000348749 PHACTR2O75167 634 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms