RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 FBXO38Q6PIJ6 1188 aa17.64■□□□□ 0.42
PTPRU-201ENST00000345512 BBXQ8WY36 941 aaPredicted RBP17.64■□□□□ 0.42
PTPRU-201ENST00000345512 SETD1BQ9UPS6 1966 aaKnown RBP17.64■□□□□ 0.42
PTPRU-201ENST00000345512 ENOX2Q16206 610 aaKnown RBP17.64■□□□□ 0.41
PTPRU-201ENST00000345512 IQUBQ8NA54 791 aa17.64■□□□□ 0.41
PTPRU-201ENST00000345512 CDC42BPGQ6DT37 1551 aa17.64■□□□□ 0.41
PTPRU-201ENST00000345512 GNAT2P19087 354 aa17.64■□□□□ 0.41
PTPRU-201ENST00000345512 STAMQ92783 540 aa17.64■□□□□ 0.41
PTPRU-201ENST00000345512 BMP2KQ9NSY1 1161 aaPredicted RBP17.64■□□□□ 0.41
PTPRU-201ENST00000345512 ARHGEF28Q8N1W1 1705 aaKnown RBP17.64■□□□□ 0.41
PTPRU-201ENST00000345512 BTBD18B2RXH4 712 aa17.64■□□□□ 0.41
PTPRU-201ENST00000345512 CHGBP05060 677 aa17.64■□□□□ 0.41
PTPRU-201ENST00000345512 ATP1A3P13637 1013 aa17.64■□□□□ 0.41
PTPRU-201ENST00000345512 MCM7P33993 719 aa17.64■□□□□ 0.41
PTPRU-201ENST00000345512 TDRD12Q587J7 1177 aaKnown RBP17.64■□□□□ 0.41
PTPRU-201ENST00000345512 DZIP1Q86YF9 867 aaKnown RBP17.64■□□□□ 0.41
PTPRU-201ENST00000345512 CMTR1Q8N1G2 835 aaKnown RBP17.64■□□□□ 0.41
PTPRU-201ENST00000345512 MAPK8IP1Q9UQF2 711 aa17.64■□□□□ 0.41
PTPRU-201ENST00000345512 PCDH11XQ9BZA7 1347 aa17.63■□□□□ 0.41
PTPRU-201ENST00000345512 PCDH11YQ9BZA8 1340 aa17.63■□□□□ 0.41
PTPRU-201ENST00000345512 KRBA2Q6ZNG9 492 aa17.63■□□□□ 0.41
PTPRU-201ENST00000345512 CAPZA3Q96KX2 299 aa17.63■□□□□ 0.41
PTPRU-201ENST00000345512 RSPH14Q9UHP6 348 aa17.63■□□□□ 0.41
PTPRU-201ENST00000345512 IDEP14735 1019 aa17.63■□□□□ 0.41
PTPRU-201ENST00000345512 OAS2P29728 719 aaKnown RBP17.63■□□□□ 0.41
PTPRU-201ENST00000345512 CDC5LQ99459 802 aaKnown RBP17.63■□□□□ 0.41
PTPRU-201ENST00000345512 KAT14Q9H8E8 782 aa17.63■□□□□ 0.41
PTPRU-201ENST00000345512 CCDC152Q4G0S7 254 aa17.63■□□□□ 0.41
PTPRU-201ENST00000345512 DRC1Q96MC2 740 aa17.63■□□□□ 0.41
PTPRU-201ENST00000345512 hCG_1642624A0A1W2PR95 340 aa17.62■□□□□ 0.41
PTPRU-201ENST00000345512 KIF23Q02241 960 aaPredicted RBP17.62■□□□□ 0.41
PTPRU-201ENST00000345512 NOSTRINQ8IVI9 506 aa17.62■□□□□ 0.41
PTPRU-201ENST00000345512 ZNF444Q8N0Y2 327 aaPredicted RBP17.62■□□□□ 0.41
PTPRU-201ENST00000345512 AIFM3Q96NN9 605 aa17.62■□□□□ 0.41
PTPRU-201ENST00000345512 DIP2CQ9Y2E4 1556 aa17.62■□□□□ 0.41
PTPRU-201ENST00000345512 CYLC1P35663 651 aaPredicted RBP17.62■□□□□ 0.41
PTPRU-201ENST00000345512 PI16Q6UXB8 463 aa17.62■□□□□ 0.41
PTPRU-201ENST00000345512 HDXQ7Z353 690 aa17.62■□□□□ 0.41
PTPRU-201ENST00000345512 NRKQ7Z2Y5 1582 aa17.62■□□□□ 0.41
PTPRU-201ENST00000345512 SYNRGQ9UMZ2 1314 aa17.62■□□□□ 0.41
PTPRU-201ENST00000345512 PSMA7O14818 248 aa17.62■□□□□ 0.41
PTPRU-201ENST00000345512 PDE4BQ07343 736 aa17.62■□□□□ 0.41
PTPRU-201ENST00000345512 DZIP3Q86Y13 1208 aaKnown RBP17.62■□□□□ 0.41
PTPRU-201ENST00000345512 EHBP1Q8NDI1 1231 aa17.62■□□□□ 0.41
PTPRU-201ENST00000345512 CTNND2Q9UQB3 1225 aa17.62■□□□□ 0.41
PTPRU-201ENST00000345512 ZNF652Q9Y2D9 606 aa17.62■□□□□ 0.41
PTPRU-201ENST00000345512 V9GY48 417 aaPredicted RBP17.62■□□□□ 0.41
PTPRU-201ENST00000345512 MROH1Q8NDA8 1641 aa17.62■□□□□ 0.41
PTPRU-201ENST00000345512 ZMYM6O95789 1325 aa17.62■□□□□ 0.41
PTPRU-201ENST00000345512 MAGEB6P1A0A0J9YX57 407 aa17.62■□□□□ 0.41
PTPRU-201ENST00000345512 AKR1B10O60218 316 aa17.62■□□□□ 0.41
PTPRU-201ENST00000345512 TCIRG1Q13488 830 aa17.62■□□□□ 0.41
PTPRU-201ENST00000345512 SHTN1A0MZ66 631 aa17.61■□□□□ 0.41
PTPRU-201ENST00000345512 GPR108Q9NPR9 543 aa17.61■□□□□ 0.41
PTPRU-201ENST00000345512 LUC7L2Q9Y383 392 aaKnown RBP17.61■□□□□ 0.41
PTPRU-201ENST00000345512 EFCAB8A8MWE9 144 aa17.61■□□□□ 0.41
PTPRU-201ENST00000345512 EXOC5O00471 708 aa17.61■□□□□ 0.41
PTPRU-201ENST00000345512 AP5Z1O43299 807 aa17.61■□□□□ 0.41
PTPRU-201ENST00000345512 IKQ13123 557 aaPredicted RBP17.61■□□□□ 0.41
PTPRU-201ENST00000345512 SMC1AQ14683 1233 aaKnown RBP17.61■□□□□ 0.41
PTPRU-201ENST00000345512 SAMD1Q6SPF0 538 aaPredicted RBP17.61■□□□□ 0.41
PTPRU-201ENST00000345512 SEC63Q9UGP8 760 aaKnown RBP17.61■□□□□ 0.41
PTPRU-201ENST00000345512 DDX41Q9UJV9 622 aaKnown RBP17.61■□□□□ 0.41
PTPRU-201ENST00000345512 STX8Q9UNK0 236 aa17.61■□□□□ 0.41
PTPRU-201ENST00000345512 IKBKBO14920 756 aa17.61■□□□□ 0.41
PTPRU-201ENST00000345512 PRDM1O75626 825 aa17.61■□□□□ 0.41
PTPRU-201ENST00000345512 TSGA10IPQ3SY00 556 aa17.61■□□□□ 0.41
PTPRU-201ENST00000345512 CCDC178Q5BJE1 867 aa17.61■□□□□ 0.41
PTPRU-201ENST00000345512 DNAJC10Q8IXB1 793 aa17.61■□□□□ 0.41
PTPRU-201ENST00000345512 ZNF710Q8N1W2 664 aa17.61■□□□□ 0.41
PTPRU-201ENST00000345512 GPR161Q8N6U8 529 aaKnown RBP17.61■□□□□ 0.41
PTPRU-201ENST00000345512 PLIN2Q99541 437 aa17.61■□□□□ 0.41
PTPRU-201ENST00000345512 RTL9Q8NET4 1388 aa17.6■□□□□ 0.41
PTPRU-201ENST00000345512 PUM3Q15397 648 aaKnown RBP17.6■□□□□ 0.41
PTPRU-201ENST00000345512 CCDC96Q2M329 555 aa17.6■□□□□ 0.41
PTPRU-201ENST00000345512 C10orf67Q8IYJ2 551 aa17.6■□□□□ 0.41
PTPRU-201ENST00000345512 TAF4BQ92750 862 aa17.6■□□□□ 0.41
PTPRU-201ENST00000345512 ALDH8A1Q9H2A2 487 aaPredicted RBP17.6■□□□□ 0.41
PTPRU-201ENST00000345512 VAT1LQ9HCJ6 419 aa17.6■□□□□ 0.41
PTPRU-201ENST00000345512 MYO1BO43795 1136 aa17.6■□□□□ 0.41
PTPRU-201ENST00000345512 ODF2Q5BJF6 829 aa17.6■□□□□ 0.41
PTPRU-201ENST00000345512 FUCA2Q9BTY2 467 aa17.6■□□□□ 0.41
PTPRU-201ENST00000345512 IVLP07476 585 aa17.6■□□□□ 0.41
PTPRU-201ENST00000345512 CKAP4Q07065 602 aaKnown RBP17.6■□□□□ 0.41
PTPRU-201ENST00000345512 APOA5Q6Q788 366 aa17.6■□□□□ 0.41
PTPRU-201ENST00000345512 FMR1NBQ8N0W7 255 aaPredicted RBP17.6■□□□□ 0.41
PTPRU-201ENST00000345512 NAPGQ99747 312 aaPredicted RBP17.6■□□□□ 0.41
PTPRU-201ENST00000345512 PUS7LQ9H0K6 701 aaKnown RBP17.6■□□□□ 0.41
PTPRU-201ENST00000345512 PATL2C9JE40 543 aaKnown RBP17.59■□□□□ 0.41
PTPRU-201ENST00000345512 KRT86O43790 486 aa17.59■□□□□ 0.41
PTPRU-201ENST00000345512 TUBB4BP68371 445 aa17.59■□□□□ 0.41
PTPRU-201ENST00000345512 IQCB1Q15051 598 aa17.59■□□□□ 0.41
PTPRU-201ENST00000345512 LONRF3Q496Y0 759 aa17.59■□□□□ 0.41
PTPRU-201ENST00000345512 STOX1Q6ZVD7 989 aa17.59■□□□□ 0.41
PTPRU-201ENST00000345512 SMARCC2Q8TAQ2 1214 aa17.59■□□□□ 0.41
PTPRU-201ENST00000345512 AKNAD1Q5T1N1 836 aa17.59■□□□□ 0.41
PTPRU-201ENST00000345512 EXOC1Q9NV70 894 aa17.59■□□□□ 0.41
PTPRU-201ENST00000345512 PDE6AP16499 860 aa17.59■□□□□ 0.41
PTPRU-201ENST00000345512 ALS2CR12Q96Q35 445 aa17.59■□□□□ 0.41
PTPRU-201ENST00000345512 VPS54Q9P1Q0 977 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms