RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 WDHD1O75717 1129 aaPredicted RBP17.73■□□□□ 0.43
HMGN3-202ENST00000344726 UQCRFS1P1P0C7P4 283 aa17.73■□□□□ 0.43
HMGN3-202ENST00000344726 BTDP43251 543 aa17.73■□□□□ 0.43
HMGN3-202ENST00000344726 RGS3P49796 1198 aa17.73■□□□□ 0.43
HMGN3-202ENST00000344726 CRHR2Q13324 411 aa17.73■□□□□ 0.43
HMGN3-202ENST00000344726 ERICH6Q7L0X2 663 aa17.73■□□□□ 0.43
HMGN3-202ENST00000344726 NSUN4Q96CB9 384 aaKnown RBP17.73■□□□□ 0.43
HMGN3-202ENST00000344726 IDI2Q9BXS1 227 aa17.73■□□□□ 0.43
HMGN3-202ENST00000344726 FKTNO75072 461 aa17.72■□□□□ 0.43
HMGN3-202ENST00000344726 RHBDL3P58872 404 aa17.72■□□□□ 0.43
HMGN3-202ENST00000344726 PDE3AQ14432 1141 aa17.72■□□□□ 0.43
HMGN3-202ENST00000344726 TTC39AQ5SRH9 613 aa17.72■□□□□ 0.43
HMGN3-202ENST00000344726 RPAP2Q8IXW5 612 aaPredicted RBP17.72■□□□□ 0.43
HMGN3-202ENST00000344726 ZNF341Q9BYN7 854 aa17.72■□□□□ 0.43
HMGN3-202ENST00000344726 ZNF112Q9UJU3 913 aa17.72■□□□□ 0.43
HMGN3-202ENST00000344726 HTTP42858 3142 aa17.72■□□□□ 0.43
HMGN3-202ENST00000344726 GPR75-ASB3A0A0A6YYF3 556 aa17.71■□□□□ 0.43
HMGN3-202ENST00000344726 CCL15-CCL14A0A0B4J2E2 113 aa17.71■□□□□ 0.43
HMGN3-202ENST00000344726 IRF6O14896 467 aa17.71■□□□□ 0.43
HMGN3-202ENST00000344726 CCL15Q16663 113 aa17.71■□□□□ 0.43
HMGN3-202ENST00000344726 CCDC158Q5M9N0 1113 aa17.71■□□□□ 0.43
HMGN3-202ENST00000344726 DCAF15Q66K64 600 aa17.71■□□□□ 0.43
HMGN3-202ENST00000344726 FAM43AQ8N2R8 423 aa17.71■□□□□ 0.43
HMGN3-202ENST00000344726 ZNF512BQ96KM6 892 aaPredicted RBP17.71■□□□□ 0.43
HMGN3-202ENST00000344726 HPS5Q9UPZ3 1129 aa17.71■□□□□ 0.43
HMGN3-202ENST00000344726 DDTLA6NHG4 134 aaPredicted RBP17.7■□□□□ 0.42
HMGN3-202ENST00000344726 ENTPD3O75355 529 aa17.7■□□□□ 0.42
HMGN3-202ENST00000344726 CYP2E1P05181 493 aaPredicted RBP17.7■□□□□ 0.42
HMGN3-202ENST00000344726 RGS19P49795 217 aa17.7■□□□□ 0.42
HMGN3-202ENST00000344726 GTF2A2P52657 109 aa17.7■□□□□ 0.42
HMGN3-202ENST00000344726 ERO1BQ86YB8 467 aa17.7■□□□□ 0.42
HMGN3-202ENST00000344726 SLF2Q8IX21 1173 aa17.7■□□□□ 0.42
HMGN3-202ENST00000344726 HOOK2Q96ED9 719 aa17.7■□□□□ 0.42
HMGN3-202ENST00000344726 RAI14Q9P0K7 980 aa17.7■□□□□ 0.42
HMGN3-202ENST00000344726 FOCADQ5VW36 1801 aa17.7■□□□□ 0.42
HMGN3-202ENST00000344726 ZAP70P43403 619 aa17.69■□□□□ 0.42
HMGN3-202ENST00000344726 PPIL2Q13356 520 aa17.69■□□□□ 0.42
HMGN3-202ENST00000344726 PICALMQ13492 652 aa17.69■□□□□ 0.42
HMGN3-202ENST00000344726 ERC1Q8IUD2 1116 aa17.69■□□□□ 0.42
HMGN3-202ENST00000344726 RHPN1Q8TCX5 695 aa17.69■□□□□ 0.42
HMGN3-202ENST00000344726 IL1RAPL2Q9NP60 686 aa17.69■□□□□ 0.42
HMGN3-202ENST00000344726 ZSWIM8A7E2V4 1837 aa17.68■□□□□ 0.42
HMGN3-202ENST00000344726 PHF20L1A8MW92 1017 aa17.68■□□□□ 0.42
HMGN3-202ENST00000344726 AACSQ86V21 672 aa17.68■□□□□ 0.42
HMGN3-202ENST00000344726 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.68■□□□□ 0.42
HMGN3-202ENST00000344726 PIH1D3Q9NQM4 214 aaKnown RBP17.68■□□□□ 0.42
HMGN3-202ENST00000344726 LRP2BPQ9P2M1 347 aa17.68■□□□□ 0.42
HMGN3-202ENST00000344726 NDUFB9Q9Y6M9 179 aa17.68■□□□□ 0.42
HMGN3-202ENST00000344726 BTBD19C9JJ37 291 aa17.67■□□□□ 0.42
HMGN3-202ENST00000344726 APBB1O00213 710 aa17.67■□□□□ 0.42
HMGN3-202ENST00000344726 SOX10P56693 466 aa17.67■□□□□ 0.42
HMGN3-202ENST00000344726 PPATQ06203 517 aa17.67■□□□□ 0.42
HMGN3-202ENST00000344726 HSP90AB4PQ58FF6 505 aa17.67■□□□□ 0.42
HMGN3-202ENST00000344726 NOL9Q5SY16 702 aaKnown RBP17.67■□□□□ 0.42
HMGN3-202ENST00000344726 OTUD7BQ6GQQ9 843 aa17.67■□□□□ 0.42
HMGN3-202ENST00000344726 ADGRA1Q86SQ6 560 aa17.67■□□□□ 0.42
HMGN3-202ENST00000344726 CD99L2Q8TCZ2 262 aa17.67■□□□□ 0.42
HMGN3-202ENST00000344726 SIPA1L1O43166 1804 aa17.67■□□□□ 0.42
HMGN3-202ENST00000344726 PHIPQ8WWQ0 1821 aa17.66■□□□□ 0.42
HMGN3-202ENST00000344726 CENPFP49454 3210 aa17.66■□□□□ 0.42
HMGN3-202ENST00000344726 HMMRO75330 724 aa17.66■□□□□ 0.42
HMGN3-202ENST00000344726 LDHCP07864 332 aa17.66■□□□□ 0.42
HMGN3-202ENST00000344726 GSTO1P78417 241 aa17.66■□□□□ 0.42
HMGN3-202ENST00000344726 MAP3K10Q02779 954 aa17.66■□□□□ 0.42
HMGN3-202ENST00000344726 MOGSQ13724 837 aa17.66■□□□□ 0.42
HMGN3-202ENST00000344726 TAF1CQ15572 869 aaPredicted RBP17.66■□□□□ 0.42
HMGN3-202ENST00000344726 PKN2Q16513 984 aaKnown RBP17.66■□□□□ 0.42
HMGN3-202ENST00000344726 FBXO46Q6PJ61 603 aaPredicted RBP17.66■□□□□ 0.42
HMGN3-202ENST00000344726 OTOP1Q7RTM1 612 aa17.66■□□□□ 0.42
HMGN3-202ENST00000344726 YTHDC1Q96MU7 727 aaKnown RBP17.66■□□□□ 0.42
HMGN3-202ENST00000344726 CHMP4BQ9H444 224 aaKnown RBP17.66■□□□□ 0.42
HMGN3-202ENST00000344726 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.66■□□□□ 0.42
HMGN3-202ENST00000344726 KCNH4Q9UQ05 1017 aa17.66■□□□□ 0.42
HMGN3-202ENST00000344726 DOCK1Q14185 1865 aa17.66■□□□□ 0.42
HMGN3-202ENST00000344726 CETPP11597 493 aa17.65■□□□□ 0.42
HMGN3-202ENST00000344726 SNAPC2Q13487 334 aa17.65■□□□□ 0.42
HMGN3-202ENST00000344726 SH3RF3Q8TEJ3 882 aaPredicted RBP17.65■□□□□ 0.42
HMGN3-202ENST00000344726 KIF1BPQ96EK5 621 aa17.65■□□□□ 0.42
HMGN3-202ENST00000344726 TRIM17Q9Y577 477 aa17.65■□□□□ 0.42
HMGN3-202ENST00000344726 PTPRFP10586 1907 aa17.64■□□□□ 0.42
HMGN3-202ENST00000344726 FAM196BA6NMK8 535 aa17.64■□□□□ 0.41
HMGN3-202ENST00000344726 NAA16Q6N069 864 aaPredicted RBP17.64■□□□□ 0.41
HMGN3-202ENST00000344726 ZSCAN29Q8IWY8 852 aaPredicted RBP17.64■□□□□ 0.41
HMGN3-202ENST00000344726 ANTXR1Q9H6X2 564 aa17.64■□□□□ 0.41
HMGN3-202ENST00000344726 COL2A1P02458 1487 aaPredicted RBP17.63■□□□□ 0.41
HMGN3-202ENST00000344726 ATAD5Q96QE3 1844 aa17.63■□□□□ 0.41
HMGN3-202ENST00000344726 TNRC18O15417 2968 aaPredicted RBP17.63■□□□□ 0.41
HMGN3-202ENST00000344726 SP3Q02447 781 aa17.63■□□□□ 0.41
HMGN3-202ENST00000344726 SCYL3Q8IZE3 742 aa17.63■□□□□ 0.41
HMGN3-202ENST00000344726 OSBPL5Q9H0X9 879 aaPredicted RBP17.63■□□□□ 0.41
HMGN3-202ENST00000344726 AATFQ9NY61 560 aaKnown RBP eCLIP17.63■□□□□ 0.41
HMGN3-202ENST00000344726 MYH1P12882 1939 aa17.62■□□□□ 0.41
HMGN3-202ENST00000344726 RAB11FIP3O75154 756 aa17.62■□□□□ 0.41
HMGN3-202ENST00000344726 PTPRAP18433 802 aa17.62■□□□□ 0.41
HMGN3-202ENST00000344726 MLLT1Q03111 559 aaPredicted RBP17.62■□□□□ 0.41
HMGN3-202ENST00000344726 RRP1BQ14684 758 aaKnown RBP17.62■□□□□ 0.41
HMGN3-202ENST00000344726 CCDC84Q86UT8 332 aaPredicted RBP17.62■□□□□ 0.41
HMGN3-202ENST00000344726 CLASRPQ8N2M8 674 aaKnown RBP17.62■□□□□ 0.41
HMGN3-202ENST00000344726 ERO1AQ96HE7 468 aa17.62■□□□□ 0.41
HMGN3-202ENST00000344726 BCL11AQ9H165 835 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms