RNA–Protein interactions for RNA: ENST00000343742.6

LRRK2-202, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 5 BASIC

Gene LRRK2, Length 4,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-202ENST00000343742 ZSWIM5Q9P217 1185 aa14.29□□□□□ -0.12
LRRK2-202ENST00000343742 TNNI2P48788 182 aa14.29□□□□□ -0.12
LRRK2-202ENST00000343742 EIF5P55010 431 aaKnown RBP14.29□□□□□ -0.12
LRRK2-202ENST00000343742 FAM160A1Q05DH4 1040 aa14.29□□□□□ -0.12
LRRK2-202ENST00000343742 KIAA0825Q8IV33 1275 aa14.29□□□□□ -0.12
LRRK2-202ENST00000343742 UBE4AQ14139 1066 aa14.28□□□□□ -0.12
LRRK2-202ENST00000343742 ARHGEF1Q92888 912 aaKnown RBP14.28□□□□□ -0.12
LRRK2-202ENST00000343742 RFX5P48382 616 aaPredicted RBP14.28□□□□□ -0.12
LRRK2-202ENST00000343742 UVSSAQ2YD98 709 aa14.28□□□□□ -0.12
LRRK2-202ENST00000343742 MYSM1Q5VVJ2 828 aa14.28□□□□□ -0.12
LRRK2-202ENST00000343742 MAPK8IP1Q9UQF2 711 aa14.28□□□□□ -0.12
LRRK2-202ENST00000343742 RTL9Q8NET4 1388 aa14.28□□□□□ -0.12
LRRK2-202ENST00000343742 AFF2P51816 1311 aa14.28□□□□□ -0.12
LRRK2-202ENST00000343742 KDM6AO15550 1401 aaPredicted RBP14.28□□□□□ -0.12
LRRK2-202ENST00000343742 DEXIO95424 95 aa14.28□□□□□ -0.12
LRRK2-202ENST00000343742 LETM2Q2VYF4 491 aa14.28□□□□□ -0.12
LRRK2-202ENST00000343742 TTF2Q9UNY4 1162 aaKnown RBP14.28□□□□□ -0.12
LRRK2-202ENST00000343742 THRAP3Q9Y2W1 955 aaKnown RBP14.28□□□□□ -0.12
LRRK2-202ENST00000343742 PRDX5P30044 214 aa14.27□□□□□ -0.12
LRRK2-202ENST00000343742 ZYXQ15942 572 aaKnown RBP14.27□□□□□ -0.12
LRRK2-202ENST00000343742 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.27□□□□□ -0.12
LRRK2-202ENST00000343742 POLR2DO15514 142 aaKnown RBP14.27□□□□□ -0.12
LRRK2-202ENST00000343742 UBASH3AP57075 661 aa14.27□□□□□ -0.12
LRRK2-202ENST00000343742 APOA5Q6Q788 366 aa14.27□□□□□ -0.12
LRRK2-202ENST00000343742 KRI1Q8N9T8 703 aaKnown RBP14.27□□□□□ -0.12
LRRK2-202ENST00000343742 CLIC6Q96NY7 704 aa14.27□□□□□ -0.12
LRRK2-202ENST00000343742 CLIC4Q9Y696 253 aa14.27□□□□□ -0.12
LRRK2-202ENST00000343742 FANCBQ8NB91 859 aa14.27□□□□□ -0.13
LRRK2-202ENST00000343742 RIPOR2Q9Y4F9 1068 aa14.27□□□□□ -0.13
LRRK2-202ENST00000343742 CALM1P0DP23 149 aa14.27□□□□□ -0.13
LRRK2-202ENST00000343742 CALM2P0DP24 149 aa14.27□□□□□ -0.13
LRRK2-202ENST00000343742 CALM3P0DP25 149 aa14.27□□□□□ -0.13
LRRK2-202ENST00000343742 STOX1Q6ZVD7 989 aa14.27□□□□□ -0.13
LRRK2-202ENST00000343742 KRT27Q7Z3Y8 459 aa14.27□□□□□ -0.13
LRRK2-202ENST00000343742 TTC14Q96N46 770 aa14.27□□□□□ -0.13
LRRK2-202ENST00000343742 ZNF202O95125 648 aa14.26□□□□□ -0.13
LRRK2-202ENST00000343742 RRAGBQ5VZM2 374 aa14.26□□□□□ -0.13
LRRK2-202ENST00000343742 STAT6P42226 847 aa14.26□□□□□ -0.13
LRRK2-202ENST00000343742 MINPP1Q9UNW1 487 aa14.26□□□□□ -0.13
LRRK2-202ENST00000343742 PLCG2P16885 1265 aa14.26□□□□□ -0.13
LRRK2-202ENST00000343742 PTPN14Q15678 1187 aa14.26□□□□□ -0.13
LRRK2-202ENST00000343742 CCDC12Q8WUD4 166 aaPredicted RBP14.26□□□□□ -0.13
LRRK2-202ENST00000343742 STRBPQ96SI9 672 aaKnown RBP14.26□□□□□ -0.13
LRRK2-202ENST00000343742 CBX8Q9HC52 389 aa14.26□□□□□ -0.13
LRRK2-202ENST00000343742 COL15A1P39059 1388 aa14.26□□□□□ -0.13
LRRK2-202ENST00000343742 GNAQP50148 359 aa14.26□□□□□ -0.13
LRRK2-202ENST00000343742 CCDC178Q5BJE1 867 aa14.26□□□□□ -0.13
LRRK2-202ENST00000343742 JAKMIP3Q5VZ66 844 aa14.26□□□□□ -0.13
LRRK2-202ENST00000343742 IFNKQ9P0W0 207 aa14.26□□□□□ -0.13
LRRK2-202ENST00000343742 KCNH3Q9ULD8 1083 aa14.26□□□□□ -0.13
LRRK2-202ENST00000343742 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.26□□□□□ -0.13
LRRK2-202ENST00000343742 ADGRB2O60241 1585 aa14.26□□□□□ -0.13
LRRK2-202ENST00000343742 A0A0U1RQG5 324 aaPredicted RBP14.25□□□□□ -0.13
LRRK2-202ENST00000343742 TNNT1P13805 278 aa14.25□□□□□ -0.13
LRRK2-202ENST00000343742 PRKCSHP14314 528 aaPredicted RBP14.25□□□□□ -0.13
LRRK2-202ENST00000343742 TBC1D10CQ8IV04 446 aa14.25□□□□□ -0.13
LRRK2-202ENST00000343742 FBXO18Q8NFZ0 1043 aa14.25□□□□□ -0.13
LRRK2-202ENST00000343742 CLSTN2Q9H4D0 955 aa14.25□□□□□ -0.13
LRRK2-202ENST00000343742 SHPRHQ149N8 1683 aa14.25□□□□□ -0.13
LRRK2-202ENST00000343742 RPS6KA4O75676 772 aa14.25□□□□□ -0.13
LRRK2-202ENST00000343742 USP17L8P0C7I0 530 aa14.25□□□□□ -0.13
LRRK2-202ENST00000343742 TMEM266Q2M3C6 531 aa14.25□□□□□ -0.13
LRRK2-202ENST00000343742 DYNLL2Q96FJ2 89 aa14.25□□□□□ -0.13
LRRK2-202ENST00000343742 ZSCAN10Q96SZ4 725 aaPredicted RBP14.25□□□□□ -0.13
LRRK2-202ENST00000343742 DEF6Q9H4E7 631 aa14.25□□□□□ -0.13
LRRK2-202ENST00000343742 ZKSCAN5Q9Y2L8 839 aa14.25□□□□□ -0.13
LRRK2-202ENST00000343742 SPATA31A1Q5TZJ5 1347 aa14.25□□□□□ -0.13
LRRK2-202ENST00000343742 H0YIN7 160 aa14.25□□□□□ -0.13
LRRK2-202ENST00000343742 PARP1P09874 1014 aaKnown RBP14.25□□□□□ -0.13
LRRK2-202ENST00000343742 TRIM28Q13263 835 aaKnown RBP14.25□□□□□ -0.13
LRRK2-202ENST00000343742 GPKOWQ92917 476 aaPredicted RBP eCLIP14.25□□□□□ -0.13
LRRK2-202ENST00000343742 RRP36Q96EU6 259 aaKnown RBP14.24□□□□□ -0.13
LRRK2-202ENST00000343742 UBR1Q8IWV7 1749 aa14.24□□□□□ -0.13
LRRK2-202ENST00000343742 SKILP12757 684 aa14.24□□□□□ -0.13
LRRK2-202ENST00000343742 ZNHIT6Q9NWK9 470 aaKnown RBP14.24□□□□□ -0.13
LRRK2-202ENST00000343742 PCDHA7Q9UN72 937 aa14.24□□□□□ -0.13
LRRK2-202ENST00000343742 IFT172Q9UG01 1749 aa14.24□□□□□ -0.13
LRRK2-202ENST00000343742 BTDP43251 543 aa14.24□□□□□ -0.13
LRRK2-202ENST00000343742 DBNDD1Q9H9R9 158 aa14.24□□□□□ -0.13
LRRK2-202ENST00000343742 NOM1Q5C9Z4 860 aaKnown RBP14.24□□□□□ -0.13
LRRK2-202ENST00000343742 CCDC148Q8NFR7 591 aa14.24□□□□□ -0.13
LRRK2-202ENST00000343742 EYA3Q99504 573 aa14.24□□□□□ -0.13
LRRK2-202ENST00000343742 HMGB2P26583 209 aaKnown RBP14.23□□□□□ -0.13
LRRK2-202ENST00000343742 MECOMQ03112 1051 aa14.23□□□□□ -0.13
LRRK2-202ENST00000343742 NOLC1Q14978 699 aaKnown RBP eCLIP14.23□□□□□ -0.13
LRRK2-202ENST00000343742 RILPL1Q5EBL4 403 aa14.23□□□□□ -0.13
LRRK2-202ENST00000343742 WDR78Q5VTH9 848 aa14.23□□□□□ -0.13
LRRK2-202ENST00000343742 USP40Q9NVE5 1235 aa14.23□□□□□ -0.13
LRRK2-202ENST00000343742 REREQ9P2R6 1566 aa14.23□□□□□ -0.13
LRRK2-202ENST00000343742 ERCC3P19447 782 aa14.23□□□□□ -0.13
LRRK2-202ENST00000343742 CALML4Q96GE6 196 aa14.23□□□□□ -0.13
LRRK2-202ENST00000343742 CEP89Q96ST8 783 aa14.23□□□□□ -0.13
LRRK2-202ENST00000343742 NUP88Q99567 741 aaPredicted RBP14.23□□□□□ -0.13
LRRK2-202ENST00000343742 CYP2D6P10635 497 aa14.23□□□□□ -0.13
LRRK2-202ENST00000343742 NR5A1Q13285 461 aa14.23□□□□□ -0.13
LRRK2-202ENST00000343742 LINC00116Q8NCU8 138 aa14.23□□□□□ -0.13
LRRK2-202ENST00000343742 BSDC1Q9NW68 430 aaPredicted RBP14.23□□□□□ -0.13
LRRK2-202ENST00000343742 STK32BQ9NY57 414 aa14.23□□□□□ -0.13
LRRK2-202ENST00000343742 N4BP3O15049 544 aa14.23□□□□□ -0.13
LRRK2-202ENST00000343742 CAGE1Q8TC20 777 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms