RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 SLC4A3P48751 1232 aa8.96□□□□□ -0.98
ZNF540-202ENST00000343599 MCM10Q7L590 875 aa8.96□□□□□ -0.98
ZNF540-202ENST00000343599 CCDC174Q6PII3 467 aa8.95□□□□□ -0.98
ZNF540-202ENST00000343599 KIAA1211Q6ZU35 1233 aa8.95□□□□□ -0.98
ZNF540-202ENST00000343599 LMCD1Q9NZU5 365 aa8.95□□□□□ -0.98
ZNF540-202ENST00000343599 ZNF70Q9UC06 446 aaPredicted RBP8.95□□□□□ -0.98
ZNF540-202ENST00000343599 SGPL1O95470 568 aa8.95□□□□□ -0.98
ZNF540-202ENST00000343599 ZSCAN20P17040 1043 aaPredicted RBP8.95□□□□□ -0.98
ZNF540-202ENST00000343599 GSTO1P78417 241 aa8.95□□□□□ -0.98
ZNF540-202ENST00000343599 PTPN12Q05209 780 aaKnown RBP8.95□□□□□ -0.98
ZNF540-202ENST00000343599 ZNF467Q7Z7K2 595 aaPredicted RBP8.95□□□□□ -0.98
ZNF540-202ENST00000343599 SNCAIPQ9Y6H5 919 aa8.95□□□□□ -0.98
ZNF540-202ENST00000343599 FDX1P10109 184 aa8.94□□□□□ -0.98
ZNF540-202ENST00000343599 PPP4CP60510 307 aa8.94□□□□□ -0.98
ZNF540-202ENST00000343599 RETREG2Q8NC44 543 aa8.94□□□□□ -0.98
ZNF540-202ENST00000343599 SECISBP2LQ93073 1101 aaKnown RBP8.94□□□□□ -0.98
ZNF540-202ENST00000343599 DHX36Q9H2U1 1008 aaKnown RBP8.94□□□□□ -0.98
ZNF540-202ENST00000343599 LAMA4Q16363 1823 aa8.94□□□□□ -0.98
ZNF540-202ENST00000343599 PLCG2P16885 1265 aa8.94□□□□□ -0.98
ZNF540-202ENST00000343599 CCDC184Q52MB2 194 aa8.94□□□□□ -0.98
ZNF540-202ENST00000343599 MAGEB6Q8N7X4 407 aa8.94□□□□□ -0.98
ZNF540-202ENST00000343599 GTPBP4Q9BZE4 634 aaKnown RBP8.94□□□□□ -0.98
ZNF540-202ENST00000343599 FAM117AQ9C073 453 aa8.94□□□□□ -0.98
ZNF540-202ENST00000343599 DEFB129Q9H1M3 183 aa8.94□□□□□ -0.98
ZNF540-202ENST00000343599 RIPOR2Q9Y4F9 1068 aa8.94□□□□□ -0.98
ZNF540-202ENST00000343599 IGKV5-2P06315 115 aa8.93□□□□□ -0.98
ZNF540-202ENST00000343599 TAF3Q5VWG9 929 aa8.93□□□□□ -0.98
ZNF540-202ENST00000343599 TATDN1Q6P1N9 297 aa8.93□□□□□ -0.98
ZNF540-202ENST00000343599 PANK2Q9BZ23 570 aa8.93□□□□□ -0.98
ZNF540-202ENST00000343599 AS3MTQ9HBK9 375 aa8.93□□□□□ -0.98
ZNF540-202ENST00000343599 AGTPBP1Q9UPW5 1226 aa8.93□□□□□ -0.98
ZNF540-202ENST00000343599 CSADQ9Y600 493 aa8.93□□□□□ -0.98
ZNF540-202ENST00000343599 ADM5C9JUS6 153 aa8.93□□□□□ -0.98
ZNF540-202ENST00000343599 OFD1O75665 1012 aa8.93□□□□□ -0.98
ZNF540-202ENST00000343599 MRE11P49959 708 aa8.93□□□□□ -0.98
ZNF540-202ENST00000343599 BEND3Q5T5X7 828 aa8.93□□□□□ -0.98
ZNF540-202ENST00000343599 GPAT2Q6NUI2 795 aa8.93□□□□□ -0.98
ZNF540-202ENST00000343599 SMIM5Q71RC9 77 aa8.93□□□□□ -0.98
ZNF540-202ENST00000343599 MBIPQ9NS73 344 aa8.93□□□□□ -0.98
ZNF540-202ENST00000343599 CHPF2Q9P2E5 772 aa8.93□□□□□ -0.98
ZNF540-202ENST00000343599 CST5P28325 142 aaPredicted RBP8.92□□□□□ -0.98
ZNF540-202ENST00000343599 MAPK4P31152 587 aa8.92□□□□□ -0.98
ZNF540-202ENST00000343599 TRMT2AQ8IZ69 625 aaKnown RBP8.92□□□□□ -0.98
ZNF540-202ENST00000343599 SCYL3Q8IZE3 742 aa8.92□□□□□ -0.98
ZNF540-202ENST00000343599 TOX2Q96NM4 488 aa8.92□□□□□ -0.98
ZNF540-202ENST00000343599 BCCIPQ9P287 314 aaKnown RBP eCLIP8.92□□□□□ -0.98
ZNF540-202ENST00000343599 DENND2AQ9ULE3 1009 aa8.92□□□□□ -0.98
ZNF540-202ENST00000343599 ZSWIM8A7E2V4 1837 aa8.92□□□□□ -0.98
ZNF540-202ENST00000343599 HMGCRP04035 888 aa8.92□□□□□ -0.98
ZNF540-202ENST00000343599 RPTORQ8N122 1335 aa8.92□□□□□ -0.98
ZNF540-202ENST00000343599 CARNS1A5YM72 827 aa8.91□□□□□ -0.98
ZNF540-202ENST00000343599 IGF2BP3O00425 579 aaKnown RBP eCLIP8.91□□□□□ -0.98
ZNF540-202ENST00000343599 LETM1O95202 739 aaPredicted RBP8.91□□□□□ -0.98
ZNF540-202ENST00000343599 TNNT2P45379 298 aaPredicted RBP8.91□□□□□ -0.98
ZNF540-202ENST00000343599 HTRA3P83110 453 aa8.91□□□□□ -0.98
ZNF540-202ENST00000343599 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.91□□□□□ -0.98
ZNF540-202ENST00000343599 NUTM1Q86Y26 1132 aa8.91□□□□□ -0.98
ZNF540-202ENST00000343599 MB21D1Q8N884 522 aa8.91□□□□□ -0.98
ZNF540-202ENST00000343599 DNAAF4Q8WXU2 420 aa8.91□□□□□ -0.98
ZNF540-202ENST00000343599 ZNF592Q92610 1267 aa8.91□□□□□ -0.98
ZNF540-202ENST00000343599 STK31Q9BXU1 1019 aa8.91□□□□□ -0.98
ZNF540-202ENST00000343599 TMOD2Q9NZR1 351 aa8.91□□□□□ -0.98
ZNF540-202ENST00000343599 AFG3L2Q9Y4W6 797 aa8.91□□□□□ -0.98
ZNF540-202ENST00000343599 PKN1Q16512 942 aa8.91□□□□□ -0.98
ZNF540-202ENST00000343599 ISY1Q9ULR0 285 aaKnown RBP8.91□□□□□ -0.98
ZNF540-202ENST00000343599 CRHR2Q13324 411 aa8.91□□□□□ -0.98
ZNF540-202ENST00000343599 RASIP1Q5U651 963 aa8.91□□□□□ -0.98
ZNF540-202ENST00000343599 TTLL5Q6EMB2 1281 aa8.91□□□□□ -0.98
ZNF540-202ENST00000343599 RCSD1Q6JBY9 416 aa8.91□□□□□ -0.98
ZNF540-202ENST00000343599 BRI3BPQ8WY22 251 aa8.91□□□□□ -0.98
ZNF540-202ENST00000343599 TEKT1Q969V4 418 aa8.91□□□□□ -0.98
ZNF540-202ENST00000343599 Q9Y3F1 56 aa8.91□□□□□ -0.98
ZNF540-202ENST00000343599 SLC15A5A6NIM6 579 aa8.9□□□□□ -0.98
ZNF540-202ENST00000343599 PARNO95453 639 aaKnown RBP8.9□□□□□ -0.98
ZNF540-202ENST00000343599 RIC3Q7Z5B4 369 aa8.9□□□□□ -0.98
ZNF540-202ENST00000343599 PLCD3Q8N3E9 789 aa8.9□□□□□ -0.98
ZNF540-202ENST00000343599 SAMD3Q8N6K7 520 aa8.9□□□□□ -0.98
ZNF540-202ENST00000343599 PHF20L1A8MW92 1017 aa8.9□□□□□ -0.99
ZNF540-202ENST00000343599 LDHCP07864 332 aa8.9□□□□□ -0.99
ZNF540-202ENST00000343599 GJA5P36382 358 aa8.9□□□□□ -0.99
ZNF540-202ENST00000343599 PUS10Q3MIT2 529 aaKnown RBP8.9□□□□□ -0.99
ZNF540-202ENST00000343599 CFAP100Q494V2 611 aa8.9□□□□□ -0.99
ZNF540-202ENST00000343599 ANP32BQ92688 251 aaKnown RBP8.9□□□□□ -0.99
ZNF540-202ENST00000343599 ARHGAP39Q9C0H5 1083 aa8.9□□□□□ -0.99
ZNF540-202ENST00000343599 ZBTB3Q9H5J0 574 aa8.9□□□□□ -0.99
ZNF540-202ENST00000343599 POTEB2H3BUK9 544 aa8.89□□□□□ -0.99
ZNF540-202ENST00000343599 PLA2G6O60733 806 aa8.89□□□□□ -0.99
ZNF540-202ENST00000343599 RAD17O75943 681 aa8.89□□□□□ -0.99
ZNF540-202ENST00000343599 PFKMP08237 780 aa8.89□□□□□ -0.99
ZNF540-202ENST00000343599 RFC2P35250 354 aa8.89□□□□□ -0.99
ZNF540-202ENST00000343599 PTPN11Q06124 597 aaPredicted RBP8.89□□□□□ -0.99
ZNF540-202ENST00000343599 CHRNDQ07001 517 aa8.89□□□□□ -0.99
ZNF540-202ENST00000343599 MORN1Q5T089 497 aa8.89□□□□□ -0.99
ZNF540-202ENST00000343599 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.89□□□□□ -0.99
ZNF540-202ENST00000343599 C6orf229H3BNL8 230 aa8.89□□□□□ -0.99
ZNF540-202ENST00000343599 OSBPP22059 807 aa8.89□□□□□ -0.99
ZNF540-202ENST00000343599 PUM3Q15397 648 aaKnown RBP8.89□□□□□ -0.99
ZNF540-202ENST00000343599 LPIN2Q92539 896 aa8.89□□□□□ -0.99
ZNF540-202ENST00000343599 CCDC94Q9BW85 323 aaPredicted RBP8.89□□□□□ -0.99
ZNF540-202ENST00000343599 KDM4CQ9H3R0 1056 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms