RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 CRKP46108 304 aa22.61■■□□□ 1.21
CDHR4-201ENST00000343366 RBM5P52756 815 aaKnown RBP eCLIP22.61■■□□□ 1.21
CDHR4-201ENST00000343366 MECOMQ03112 1051 aa22.61■■□□□ 1.21
CDHR4-201ENST00000343366 MAP3K11Q16584 847 aa22.61■■□□□ 1.21
CDHR4-201ENST00000343366 TSHZ3Q63HK5 1081 aa22.61■■□□□ 1.21
CDHR4-201ENST00000343366 NAA16Q6N069 864 aaPredicted RBP22.61■■□□□ 1.21
CDHR4-201ENST00000343366 NOL10Q9BSC4 688 aaKnown RBP22.61■■□□□ 1.21
CDHR4-201ENST00000343366 PIH1D3Q9NQM4 214 aaKnown RBP22.61■■□□□ 1.21
CDHR4-201ENST00000343366 ALDH1A1P00352 501 aa22.6■■□□□ 1.21
CDHR4-201ENST00000343366 NF2P35240 595 aa22.6■■□□□ 1.21
CDHR4-201ENST00000343366 TTLL12Q14166 644 aaPredicted RBP22.6■■□□□ 1.21
CDHR4-201ENST00000343366 CFAP100Q494V2 611 aa22.6■■□□□ 1.21
CDHR4-201ENST00000343366 OTOP1Q7RTM1 612 aa22.6■■□□□ 1.21
CDHR4-201ENST00000343366 ANTXR1Q9H6X2 564 aa22.6■■□□□ 1.21
CDHR4-201ENST00000343366 RFX7Q2KHR2 1363 aa22.6■■□□□ 1.21
CDHR4-201ENST00000343366 MYO5AQ9Y4I1 1855 aaKnown RBP22.6■■□□□ 1.21
CDHR4-201ENST00000343366 AK9Q5TCS8 1911 aa22.59■■□□□ 1.21
CDHR4-201ENST00000343366 BAG3O95817 575 aa22.59■■□□□ 1.21
CDHR4-201ENST00000343366 PLCG2P16885 1265 aa22.59■■□□□ 1.21
CDHR4-201ENST00000343366 TTC22Q5TAA0 569 aa22.59■■□□□ 1.21
CDHR4-201ENST00000343366 ARMC9Q7Z3E5 817 aa22.59■■□□□ 1.21
CDHR4-201ENST00000343366 IFNL1Q8IU54 200 aa22.59■■□□□ 1.21
CDHR4-201ENST00000343366 APOBEC3FQ8IUX4 373 aaKnown RBP22.59■■□□□ 1.21
CDHR4-201ENST00000343366 MROH7-TTC4A0A0A0MT08 1334 aa22.58■■□□□ 1.21
CDHR4-201ENST00000343366 GAKO14976 1311 aa22.58■■□□□ 1.21
CDHR4-201ENST00000343366 SPDYE2BA6NHP3 402 aa22.58■■□□□ 1.21
CDHR4-201ENST00000343366 TRIM6-TRIM34B2RNG4 842 aa22.58■■□□□ 1.21
CDHR4-201ENST00000343366 SPDYE6P0CI01 402 aa22.58■■□□□ 1.21
CDHR4-201ENST00000343366 SLC9C2Q5TAH2 1124 aa22.58■■□□□ 1.21
CDHR4-201ENST00000343366 FZD1Q9UP38 647 aa22.58■■□□□ 1.21
CDHR4-201ENST00000343366 NDUFB9Q9Y6M9 179 aa22.58■■□□□ 1.21
CDHR4-201ENST00000343366 OTOFQ9HC10 1997 aa22.58■■□□□ 1.2
CDHR4-201ENST00000343366 HIP1O00291 1037 aa22.57■■□□□ 1.2
CDHR4-201ENST00000343366 IGF2BP3O00425 579 aaKnown RBP eCLIP22.57■■□□□ 1.2
CDHR4-201ENST00000343366 INHBEP58166 350 aa22.57■■□□□ 1.2
CDHR4-201ENST00000343366 UBE3CQ15386 1083 aa22.57■■□□□ 1.2
CDHR4-201ENST00000343366 GRIK5Q16478 980 aa22.57■■□□□ 1.2
CDHR4-201ENST00000343366 FSD1Q9BTV5 496 aa22.57■■□□□ 1.2
CDHR4-201ENST00000343366 GTF3C3Q9Y5Q9 886 aa22.57■■□□□ 1.2
CDHR4-201ENST00000343366 MANSC4A6NHS7 340 aaPredicted RBP22.56■■□□□ 1.2
CDHR4-201ENST00000343366 ZBTB48P10074 688 aaPredicted RBP22.56■■□□□ 1.2
CDHR4-201ENST00000343366 CAP1Q01518 475 aa22.56■■□□□ 1.2
CDHR4-201ENST00000343366 MAGEB6Q8N7X4 407 aa22.56■■□□□ 1.2
CDHR4-201ENST00000343366 ARMC5Q96C12 935 aa22.56■■□□□ 1.2
CDHR4-201ENST00000343366 TMOD2Q9NZR1 351 aa22.56■■□□□ 1.2
CDHR4-201ENST00000343366 ANGEL1Q9UNK9 670 aaKnown RBP22.56■■□□□ 1.2
CDHR4-201ENST00000343366 DAGLAQ9Y4D2 1042 aa22.56■■□□□ 1.2
CDHR4-201ENST00000343366 TRIM17Q9Y577 477 aa22.56■■□□□ 1.2
CDHR4-201ENST00000343366 CEP290O15078 2479 aa22.55■■□□□ 1.2
CDHR4-201ENST00000343366 GPR75-ASB3A0A0A6YYF3 556 aa22.55■■□□□ 1.2
CDHR4-201ENST00000343366 PDE6AP16499 860 aa22.55■■□□□ 1.2
CDHR4-201ENST00000343366 CYP7A1P22680 504 aa22.55■■□□□ 1.2
CDHR4-201ENST00000343366 ADD2P35612 726 aa22.55■■□□□ 1.2
CDHR4-201ENST00000343366 PRKG1Q13976 671 aa22.55■■□□□ 1.2
CDHR4-201ENST00000343366 RILPL2Q969X0 211 aa22.55■■□□□ 1.2
CDHR4-201ENST00000343366 EDC3Q96F86 508 aaKnown RBP22.55■■□□□ 1.2
CDHR4-201ENST00000343366 RANBP2P49792 3224 aaKnown RBP22.55■■□□□ 1.2
CDHR4-201ENST00000343366 RNF113AO15541 343 aaKnown RBP22.54■■□□□ 1.2
CDHR4-201ENST00000343366 FXR1P51114 621 aaKnown RBP eCLIP22.54■■□□□ 1.2
CDHR4-201ENST00000343366 PPP4CP60510 307 aa22.54■■□□□ 1.2
CDHR4-201ENST00000343366 TNFAIP1Q13829 316 aa22.54■■□□□ 1.2
CDHR4-201ENST00000343366 DIXDC1Q155Q3 683 aa22.54■■□□□ 1.2
CDHR4-201ENST00000343366 WNK4Q96J92 1243 aa22.54■■□□□ 1.2
CDHR4-201ENST00000343366 PTPN22Q9Y2R2 807 aa22.54■■□□□ 1.2
CDHR4-201ENST00000343366 UNCXA6NJT0 531 aa22.53■■□□□ 1.2
CDHR4-201ENST00000343366 BMP2KLQ5H9B9 411 aa22.53■■□□□ 1.2
CDHR4-201ENST00000343366 FKBP1CQ5VVH2 108 aa22.53■■□□□ 1.2
CDHR4-201ENST00000343366 APOBEC3HQ6NTF7 200 aaKnown RBP22.53■■□□□ 1.2
CDHR4-201ENST00000343366 CLMNQ96JQ2 1002 aa22.53■■□□□ 1.2
CDHR4-201ENST00000343366 PRMT6Q96LA8 375 aaPredicted RBP22.53■■□□□ 1.2
CDHR4-201ENST00000343366 DEFB129Q9H1M3 183 aa22.53■■□□□ 1.2
CDHR4-201ENST00000343366 ZNF532Q9HCE3 1301 aa22.53■■□□□ 1.2
CDHR4-201ENST00000343366 RGS3P49796 1198 aa22.52■■□□□ 1.2
CDHR4-201ENST00000343366 SPDYE2Q495Y8 402 aa22.52■■□□□ 1.2
CDHR4-201ENST00000343366 ZNF384Q8TF68 577 aa22.52■■□□□ 1.2
CDHR4-201ENST00000343366 TCRBV5S4A2TA0A5A2 114 aa22.51■■□□□ 1.19
CDHR4-201ENST00000343366 TESPA1A2RU30 521 aaPredicted RBP22.51■■□□□ 1.19
CDHR4-201ENST00000343366 GJA5P36382 358 aa22.51■■□□□ 1.19
CDHR4-201ENST00000343366 BTDP43251 543 aa22.51■■□□□ 1.19
CDHR4-201ENST00000343366 TNNI2P48788 182 aa22.51■■□□□ 1.19
CDHR4-201ENST00000343366 APPBP2Q92624 585 aa22.51■■□□□ 1.19
CDHR4-201ENST00000343366 NPM3O75607 178 aaKnown RBP22.5■■□□□ 1.19
CDHR4-201ENST00000343366 SLC10A4Q96EP9 437 aa22.5■■□□□ 1.19
CDHR4-201ENST00000343366 ZNF70Q9UC06 446 aaPredicted RBP22.5■■□□□ 1.19
CDHR4-201ENST00000343366 PPP2R3BQ9Y5P8 575 aa22.5■■□□□ 1.19
CDHR4-201ENST00000343366 MAGEB6P1A0A0J9YX57 407 aa22.49■■□□□ 1.19
CDHR4-201ENST00000343366 GSPT1P15170 499 aaKnown RBP22.49■■□□□ 1.19
CDHR4-201ENST00000343366 SDSP20132 328 aa22.49■■□□□ 1.19
CDHR4-201ENST00000343366 CRHR2Q13324 411 aa22.49■■□□□ 1.19
CDHR4-201ENST00000343366 ERO1AQ96HE7 468 aa22.49■■□□□ 1.19
CDHR4-201ENST00000343366 PTPN18Q99952 460 aa22.49■■□□□ 1.19
CDHR4-201ENST00000343366 TDRD3Q9H7E2 651 aaKnown RBP22.49■■□□□ 1.19
CDHR4-201ENST00000343366 HELLSQ9NRZ9 838 aa22.49■■□□□ 1.19
CDHR4-201ENST00000343366 USP40Q9NVE5 1235 aa22.49■■□□□ 1.19
CDHR4-201ENST00000343366 PCDHAC2Q9Y5I4 1007 aa22.49■■□□□ 1.19
CDHR4-201ENST00000343366 TRIOBPQ9H2D6 2365 aa22.49■■□□□ 1.19
CDHR4-201ENST00000343366 EN2P19622 333 aaPredicted RBP22.48■■□□□ 1.19
CDHR4-201ENST00000343366 MFAP1P55081 439 aaKnown RBP22.48■■□□□ 1.19
CDHR4-201ENST00000343366 CDC42EP5Q6NZY7 148 aa22.48■■□□□ 1.19
CDHR4-201ENST00000343366 FAM83AQ86UY5 434 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms