RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 DDX4Q9NQI0 724 aaKnown RBP15.84■□□□□ 0.13
HLA-DQA1-201ENST00000343139 THSD7BQ9C0I4 1608 aa15.84■□□□□ 0.13
HLA-DQA1-201ENST00000343139 DOCK2Q92608 1830 aa15.84■□□□□ 0.13
HLA-DQA1-201ENST00000343139 ADD2P35612 726 aa15.83■□□□□ 0.13
HLA-DQA1-201ENST00000343139 MAP2K1Q02750 393 aaPredicted RBP15.83■□□□□ 0.13
HLA-DQA1-201ENST00000343139 RASAL3Q86YV0 1011 aa15.83■□□□□ 0.13
HLA-DQA1-201ENST00000343139 KBTBD3Q8NAB2 608 aa15.83■□□□□ 0.13
HLA-DQA1-201ENST00000343139 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.83■□□□□ 0.13
HLA-DQA1-201ENST00000343139 OTUD7AQ8TE49 926 aaPredicted RBP15.83■□□□□ 0.13
HLA-DQA1-201ENST00000343139 SH3RF3Q8TEJ3 882 aaPredicted RBP15.83■□□□□ 0.13
HLA-DQA1-201ENST00000343139 EDC3Q96F86 508 aaKnown RBP15.83■□□□□ 0.13
HLA-DQA1-201ENST00000343139 RIOK1Q9BRS2 568 aaKnown RBP15.83■□□□□ 0.13
HLA-DQA1-201ENST00000343139 DHX36Q9H2U1 1008 aaKnown RBP15.83■□□□□ 0.13
HLA-DQA1-201ENST00000343139 TBC1D12O60347 775 aa15.83■□□□□ 0.12
HLA-DQA1-201ENST00000343139 PDE1AP54750 535 aa15.83■□□□□ 0.12
HLA-DQA1-201ENST00000343139 LRRFIP1Q32MZ4 808 aaKnown RBP15.83■□□□□ 0.12
HLA-DQA1-201ENST00000343139 ZFPM1Q8IX07 1006 aa15.83■□□□□ 0.12
HLA-DQA1-201ENST00000343139 CSRNP1Q96S65 589 aa15.83■□□□□ 0.12
HLA-DQA1-201ENST00000343139 OSBPL5Q9H0X9 879 aaPredicted RBP15.83■□□□□ 0.12
HLA-DQA1-201ENST00000343139 ZNF112Q9UJU3 913 aa15.83■□□□□ 0.12
HLA-DQA1-201ENST00000343139 ZNF532Q9HCE3 1301 aa15.82■□□□□ 0.12
HLA-DQA1-201ENST00000343139 ZFYP08048 801 aaPredicted RBP15.82■□□□□ 0.12
HLA-DQA1-201ENST00000343139 MAP3K9P80192 1104 aa15.82■□□□□ 0.12
HLA-DQA1-201ENST00000343139 PICALMQ13492 652 aa15.82■□□□□ 0.12
HLA-DQA1-201ENST00000343139 PRKG1Q13976 671 aa15.82■□□□□ 0.12
HLA-DQA1-201ENST00000343139 SH3BP5LQ7L8J4 393 aa15.82■□□□□ 0.12
HLA-DQA1-201ENST00000343139 ZNF341Q9BYN7 854 aa15.82■□□□□ 0.12
HLA-DQA1-201ENST00000343139 OSBPL3Q9H4L5 887 aa15.82■□□□□ 0.12
HLA-DQA1-201ENST00000343139 ZBTB48P10074 688 aaPredicted RBP15.81■□□□□ 0.12
HLA-DQA1-201ENST00000343139 TSHZ3Q63HK5 1081 aa15.81■□□□□ 0.12
HLA-DQA1-201ENST00000343139 SLC10A4Q96EP9 437 aa15.81■□□□□ 0.12
HLA-DQA1-201ENST00000343139 LNPKQ9C0E8 428 aa15.81■□□□□ 0.12
HLA-DQA1-201ENST00000343139 WBP1LQ9NX94 342 aa15.81■□□□□ 0.12
HLA-DQA1-201ENST00000343139 FLT1P17948 1338 aa15.81■□□□□ 0.12
HLA-DQA1-201ENST00000343139 MAGEB6P1A0A0J9YX57 407 aa15.8■□□□□ 0.12
HLA-DQA1-201ENST00000343139 DDTLA6NHG4 134 aaPredicted RBP15.8■□□□□ 0.12
HLA-DQA1-201ENST00000343139 DYNLL1P63167 89 aaKnown RBP15.8■□□□□ 0.12
HLA-DQA1-201ENST00000343139 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.8■□□□□ 0.12
HLA-DQA1-201ENST00000343139 METTL16Q86W50 562 aaKnown RBP15.8■□□□□ 0.12
HLA-DQA1-201ENST00000343139 MIGA1Q8NAN2 632 aa15.8■□□□□ 0.12
HLA-DQA1-201ENST00000343139 TGFBRAP1Q8WUH2 860 aa15.8■□□□□ 0.12
HLA-DQA1-201ENST00000343139 FZD1Q9UP38 647 aa15.8■□□□□ 0.12
HLA-DQA1-201ENST00000343139 PCNTO95613 3336 aa15.8■□□□□ 0.12
HLA-DQA1-201ENST00000343139 SPRYD7Q5W111 196 aa15.79■□□□□ 0.12
HLA-DQA1-201ENST00000343139 B4GALNT3Q6L9W6 998 aa15.79■□□□□ 0.12
HLA-DQA1-201ENST00000343139 ZSCAN29Q8IWY8 852 aaPredicted RBP15.79■□□□□ 0.12
HLA-DQA1-201ENST00000343139 WRNIP1Q96S55 665 aa15.79■□□□□ 0.12
HLA-DQA1-201ENST00000343139 CRNKL1Q9BZJ0 848 aaKnown RBP15.79■□□□□ 0.12
HLA-DQA1-201ENST00000343139 PI4KBQ9UBF8 816 aa15.79■□□□□ 0.12
HLA-DQA1-201ENST00000343139 HERC5Q9UII4 1024 aaKnown RBP15.79■□□□□ 0.12
HLA-DQA1-201ENST00000343139 TAOK2Q9UL54 1235 aa15.79■□□□□ 0.12
HLA-DQA1-201ENST00000343139 CSADQ9Y600 493 aa15.79■□□□□ 0.12
HLA-DQA1-201ENST00000343139 CA12O43570 354 aa15.79■□□□□ 0.12
HLA-DQA1-201ENST00000343139 AOC2O75106 756 aa15.79■□□□□ 0.12
HLA-DQA1-201ENST00000343139 GRM1Q13255 1194 aa15.79■□□□□ 0.12
HLA-DQA1-201ENST00000343139 VGLL4Q14135 290 aa15.79■□□□□ 0.12
HLA-DQA1-201ENST00000343139 NOL9Q5SY16 702 aaKnown RBP15.79■□□□□ 0.12
HLA-DQA1-201ENST00000343139 PHF20L1A8MW92 1017 aa15.78■□□□□ 0.12
HLA-DQA1-201ENST00000343139 RNF113AO15541 343 aaKnown RBP15.78■□□□□ 0.12
HLA-DQA1-201ENST00000343139 INHBEP58166 350 aa15.78■□□□□ 0.12
HLA-DQA1-201ENST00000343139 KIF23Q02241 960 aaPredicted RBP15.78■□□□□ 0.12
HLA-DQA1-201ENST00000343139 MIGA2Q7L4E1 593 aa15.78■□□□□ 0.12
HLA-DQA1-201ENST00000343139 FOXP4Q8IVH2 680 aaPredicted RBP15.78■□□□□ 0.12
HLA-DQA1-201ENST00000343139 PLEKHM2Q8IWE5 1019 aa15.78■□□□□ 0.12
HLA-DQA1-201ENST00000343139 EVI5LQ96CN4 794 aa15.78■□□□□ 0.12
HLA-DQA1-201ENST00000343139 CLMNQ96JQ2 1002 aa15.78■□□□□ 0.12
HLA-DQA1-201ENST00000343139 SPDYE5A6NIY4 337 aa15.77■□□□□ 0.11
HLA-DQA1-201ENST00000343139 USP5P45974 858 aa15.77■□□□□ 0.11
HLA-DQA1-201ENST00000343139 MAPKAPK5Q8IW41 473 aa15.77■□□□□ 0.11
HLA-DQA1-201ENST00000343139 APPBP2Q92624 585 aa15.77■□□□□ 0.11
HLA-DQA1-201ENST00000343139 WNK4Q96J92 1243 aa15.77■□□□□ 0.11
HLA-DQA1-201ENST00000343139 CTNND1O60716 968 aaKnown RBP15.76■□□□□ 0.11
HLA-DQA1-201ENST00000343139 TM4SF4P48230 202 aa15.76■□□□□ 0.11
HLA-DQA1-201ENST00000343139 SREBF2Q12772 1141 aa15.76■□□□□ 0.11
HLA-DQA1-201ENST00000343139 ERO1BQ86YB8 467 aa15.76■□□□□ 0.11
HLA-DQA1-201ENST00000343139 LCORLQ8N3X6 602 aa15.76■□□□□ 0.11
HLA-DQA1-201ENST00000343139 BEGAINQ9BUH8 593 aa15.76■□□□□ 0.11
HLA-DQA1-201ENST00000343139 EHD4Q9H223 541 aa15.76■□□□□ 0.11
HLA-DQA1-201ENST00000343139 ATP8A2Q9NTI2 1148 aa15.76■□□□□ 0.11
HLA-DQA1-201ENST00000343139 SNCAIPQ9Y6H5 919 aa15.76■□□□□ 0.11
HLA-DQA1-201ENST00000343139 MYO5AQ9Y4I1 1855 aaKnown RBP15.75■□□□□ 0.11
HLA-DQA1-201ENST00000343139 MANSC4A6NHS7 340 aaPredicted RBP15.75■□□□□ 0.11
HLA-DQA1-201ENST00000343139 HLA-DOAP06340 250 aa15.75■□□□□ 0.11
HLA-DQA1-201ENST00000343139 HSPA1AP0DMV8 641 aaKnown RBP15.75■□□□□ 0.11
HLA-DQA1-201ENST00000343139 HSPA1BP0DMV9 641 aaKnown RBP15.75■□□□□ 0.11
HLA-DQA1-201ENST00000343139 TTC6Q86TZ1 520 aa15.75■□□□□ 0.11
HLA-DQA1-201ENST00000343139 AIDAQ96BJ3 306 aa15.75■□□□□ 0.11
HLA-DQA1-201ENST00000343139 ZIC5Q96T25 663 aa15.75■□□□□ 0.11
HLA-DQA1-201ENST00000343139 PUS7LQ9H0K6 701 aaKnown RBP15.75■□□□□ 0.11
HLA-DQA1-201ENST00000343139 SAGE1Q9NXZ1 904 aa15.75■□□□□ 0.11
HLA-DQA1-201ENST00000343139 MBD4O95243 580 aa15.75■□□□□ 0.11
HLA-DQA1-201ENST00000343139 PPATQ06203 517 aa15.75■□□□□ 0.11
HLA-DQA1-201ENST00000343139 ZKSCAN4Q969J2 545 aaPredicted RBP15.75■□□□□ 0.11
HLA-DQA1-201ENST00000343139 OPTNQ96CV9 577 aa15.75■□□□□ 0.11
HLA-DQA1-201ENST00000343139 FSD1Q9BTV5 496 aa15.75■□□□□ 0.11
HLA-DQA1-201ENST00000343139 ELP3Q9H9T3 547 aa15.75■□□□□ 0.11
HLA-DQA1-201ENST00000343139 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.75■□□□□ 0.11
HLA-DQA1-201ENST00000343139 DCP1AQ9NPI6 582 aaPredicted RBP15.75■□□□□ 0.11
HLA-DQA1-201ENST00000343139 PALD1Q9ULE6 856 aa15.75■□□□□ 0.11
HLA-DQA1-201ENST00000343139 TESPA1A2RU30 521 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms