RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 FAM47AQ5JRC9 791 aa17.7■□□□□ 0.42
CARMIL3-201ENST00000342740 SDR42E1Q8WUS8 393 aa17.7■□□□□ 0.42
CARMIL3-201ENST00000342740 MMRN2Q9H8L6 949 aa17.7■□□□□ 0.42
CARMIL3-201ENST00000342740 LMTK2Q8IWU2 1503 aa17.69■□□□□ 0.42
CARMIL3-201ENST00000342740 NEFHP12036 1026 aa17.69■□□□□ 0.42
CARMIL3-201ENST00000342740 CCDC66A2RUB6 948 aa17.69■□□□□ 0.42
CARMIL3-201ENST00000342740 CUTAO60888 179 aa17.69■□□□□ 0.42
CARMIL3-201ENST00000342740 GTF2IP78347 998 aa17.69■□□□□ 0.42
CARMIL3-201ENST00000342740 POLA2Q14181 598 aa17.69■□□□□ 0.42
CARMIL3-201ENST00000342740 UBE3CQ15386 1083 aa17.69■□□□□ 0.42
CARMIL3-201ENST00000342740 NLRP10Q86W26 655 aa17.69■□□□□ 0.42
CARMIL3-201ENST00000342740 ZNF654Q8IZM8 581 aa17.69■□□□□ 0.42
CARMIL3-201ENST00000342740 ZSWIM4Q9H7M6 989 aa17.69■□□□□ 0.42
CARMIL3-201ENST00000342740 H0YHG0 523 aa17.69■□□□□ 0.42
CARMIL3-201ENST00000342740 ADD1P35611 737 aaKnown RBP17.69■□□□□ 0.42
CARMIL3-201ENST00000342740 CYLC1P35663 651 aaPredicted RBP17.69■□□□□ 0.42
CARMIL3-201ENST00000342740 DNAI1Q9UI46 699 aa17.69■□□□□ 0.42
CARMIL3-201ENST00000342740 TMCO5BA8MYB1 307 aa17.69■□□□□ 0.42
CARMIL3-201ENST00000342740 POLR2DO15514 142 aaKnown RBP17.69■□□□□ 0.42
CARMIL3-201ENST00000342740 SPECC1Q5M775 1068 aa17.69■□□□□ 0.42
CARMIL3-201ENST00000342740 ABCA6Q8N139 1617 aa17.69■□□□□ 0.42
CARMIL3-201ENST00000342740 SASH1O94885 1247 aa17.68■□□□□ 0.42
CARMIL3-201ENST00000342740 ALDH1B1P30837 517 aa17.68■□□□□ 0.42
CARMIL3-201ENST00000342740 TTC38Q5R3I4 469 aa17.68■□□□□ 0.42
CARMIL3-201ENST00000342740 CCDC174Q6PII3 467 aa17.68■□□□□ 0.42
CARMIL3-201ENST00000342740 ZNF202O95125 648 aa17.68■□□□□ 0.42
CARMIL3-201ENST00000342740 MAP9Q49MG5 647 aa17.68■□□□□ 0.42
CARMIL3-201ENST00000342740 ZMYM1Q5SVZ6 1142 aa17.68■□□□□ 0.42
CARMIL3-201ENST00000342740 MTMR6Q9Y217 621 aa17.68■□□□□ 0.42
CARMIL3-201ENST00000342740 PFKFB2O60825 505 aa17.68■□□□□ 0.42
CARMIL3-201ENST00000342740 UBE4AQ14139 1066 aa17.68■□□□□ 0.42
CARMIL3-201ENST00000342740 JADE2Q9NQC1 790 aa17.68■□□□□ 0.42
CARMIL3-201ENST00000342740 ATG3Q9NT62 314 aa17.68■□□□□ 0.42
CARMIL3-201ENST00000342740 TMEM63CQ9P1W3 806 aa17.68■□□□□ 0.42
CARMIL3-201ENST00000342740 ADGRL3Q9HAR2 1447 aa17.68■□□□□ 0.42
CARMIL3-201ENST00000342740 BICDL2A1A5D9 508 aa17.67■□□□□ 0.42
CARMIL3-201ENST00000342740 PLCD1P51178 756 aa17.67■□□□□ 0.42
CARMIL3-201ENST00000342740 KCNQ4P56696 695 aa17.67■□□□□ 0.42
CARMIL3-201ENST00000342740 TAF3Q5VWG9 929 aa17.67■□□□□ 0.42
CARMIL3-201ENST00000342740 LARGE2Q8N3Y3 721 aa17.67■□□□□ 0.42
CARMIL3-201ENST00000342740 ARPP21Q9UBL0 812 aaPredicted RBP17.67■□□□□ 0.42
CARMIL3-201ENST00000342740 BICD1Q96G01 975 aa17.67■□□□□ 0.42
CARMIL3-201ENST00000342740 GTPBP4Q9BZE4 634 aaKnown RBP17.67■□□□□ 0.42
CARMIL3-201ENST00000342740 CYP21A2P08686 494 aa17.67■□□□□ 0.42
CARMIL3-201ENST00000342740 MYSM1Q5VVJ2 828 aa17.67■□□□□ 0.42
CARMIL3-201ENST00000342740 SEC31BQ9NQW1 1179 aa17.67■□□□□ 0.42
CARMIL3-201ENST00000342740 TCP10Q12799 353 aa17.67■□□□□ 0.42
CARMIL3-201ENST00000342740 FAM182BQ5T319 152 aa17.67■□□□□ 0.42
CARMIL3-201ENST00000342740 ZNF589Q86UQ0 364 aaPredicted RBP17.67■□□□□ 0.42
CARMIL3-201ENST00000342740 ANTXR1Q9H6X2 564 aa17.67■□□□□ 0.42
CARMIL3-201ENST00000342740 VPS54Q9P1Q0 977 aa17.67■□□□□ 0.42
CARMIL3-201ENST00000342740 CD2BP2O95400 341 aaKnown RBP17.66■□□□□ 0.42
CARMIL3-201ENST00000342740 EHBP1Q8NDI1 1231 aa17.66■□□□□ 0.42
CARMIL3-201ENST00000342740 MPHOSPH6Q99547 160 aaKnown RBP17.66■□□□□ 0.42
CARMIL3-201ENST00000342740 SH2D4AQ9H788 454 aa17.66■□□□□ 0.42
CARMIL3-201ENST00000342740 SLC1A4P43007 532 aa17.66■□□□□ 0.42
CARMIL3-201ENST00000342740 TSPYL1Q9H0U9 437 aa17.66■□□□□ 0.42
CARMIL3-201ENST00000342740 PLS1Q14651 629 aa17.66■□□□□ 0.42
CARMIL3-201ENST00000342740 CGNQ9P2M7 1197 aaKnown RBP17.66■□□□□ 0.42
CARMIL3-201ENST00000342740 SETBP1Q9Y6X0 1596 aa17.66■□□□□ 0.42
CARMIL3-201ENST00000342740 IGKV5-2P06315 115 aa17.65■□□□□ 0.42
CARMIL3-201ENST00000342740 MCM3P25205 808 aa17.65■□□□□ 0.42
CARMIL3-201ENST00000342740 FCHSD1Q86WN1 690 aa17.65■□□□□ 0.42
CARMIL3-201ENST00000342740 TTF2Q9UNY4 1162 aaKnown RBP17.65■□□□□ 0.42
CARMIL3-201ENST00000342740 RGS12O14924 1447 aa17.65■□□□□ 0.42
CARMIL3-201ENST00000342740 UBXN1Q04323 297 aa17.65■□□□□ 0.42
CARMIL3-201ENST00000342740 TAX1BP1Q86VP1 789 aa17.65■□□□□ 0.42
CARMIL3-201ENST00000342740 ERVV-1B6SEH8 477 aa17.65■□□□□ 0.42
CARMIL3-201ENST00000342740 SV2BQ7L1I2 683 aa17.65■□□□□ 0.42
CARMIL3-201ENST00000342740 CEP152O94986 1710 aa17.65■□□□□ 0.42
CARMIL3-201ENST00000342740 KRT13P13646 458 aa17.65■□□□□ 0.42
CARMIL3-201ENST00000342740 NAP1L4Q99733 375 aaKnown RBP17.65■□□□□ 0.42
CARMIL3-201ENST00000342740 USP31Q70CQ4 1352 aa17.64■□□□□ 0.42
CARMIL3-201ENST00000342740 ARID4AP29374 1257 aaPredicted RBP17.64■□□□□ 0.42
CARMIL3-201ENST00000342740 HS2ST1Q7LGA3 356 aa17.64■□□□□ 0.42
CARMIL3-201ENST00000342740 FANCBQ8NB91 859 aa17.64■□□□□ 0.42
CARMIL3-201ENST00000342740 TRPC5Q9UL62 973 aaPredicted RBP17.64■□□□□ 0.42
CARMIL3-201ENST00000342740 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.64■□□□□ 0.42
CARMIL3-201ENST00000342740 CCNT1O60563 726 aaKnown RBP17.64■□□□□ 0.41
CARMIL3-201ENST00000342740 CCDC175P0C221 793 aa17.64■□□□□ 0.41
CARMIL3-201ENST00000342740 ATP2B4P23634 1241 aa17.64■□□□□ 0.41
CARMIL3-201ENST00000342740 TXKP42681 527 aa17.64■□□□□ 0.41
CARMIL3-201ENST00000342740 NONOQ15233 471 aaKnown RBP eCLIP17.64■□□□□ 0.41
CARMIL3-201ENST00000342740 SEPT7Q16181 437 aaKnown RBP17.64■□□□□ 0.41
CARMIL3-201ENST00000342740 CMTR1Q8N1G2 835 aaKnown RBP17.64■□□□□ 0.41
CARMIL3-201ENST00000342740 TNKSO95271 1327 aa17.64■□□□□ 0.41
CARMIL3-201ENST00000342740 MACROD2A1Z1Q3 448 aa17.64■□□□□ 0.41
CARMIL3-201ENST00000342740 H7C1W4 665 aa17.64■□□□□ 0.41
CARMIL3-201ENST00000342740 FAM13AO94988 1023 aa17.64■□□□□ 0.41
CARMIL3-201ENST00000342740 PI16Q6UXB8 463 aa17.64■□□□□ 0.41
CARMIL3-201ENST00000342740 FAM196AQ6ZSG2 479 aa17.64■□□□□ 0.41
CARMIL3-201ENST00000342740 LZTS2Q9BRK4 669 aa17.64■□□□□ 0.41
CARMIL3-201ENST00000342740 GJA3Q9Y6H8 435 aa17.64■□□□□ 0.41
CARMIL3-201ENST00000342740 ZNF804BA4D1E1 1349 aa17.64■□□□□ 0.41
CARMIL3-201ENST00000342740 ADCY9O60503 1353 aa17.64■□□□□ 0.41
CARMIL3-201ENST00000342740 MYCNP04198 464 aaPredicted RBP17.64■□□□□ 0.41
CARMIL3-201ENST00000342740 CCDC172P0C7W6 258 aa17.64■□□□□ 0.41
CARMIL3-201ENST00000342740 USP28Q96RU2 1077 aa17.64■□□□□ 0.41
CARMIL3-201ENST00000342740 CBX8Q9HC52 389 aa17.64■□□□□ 0.41
CARMIL3-201ENST00000342740 ARHGEF10LQ9HCE6 1279 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms