RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 ARID4AP29374 1257 aaPredicted RBP12.64□□□□□ -0.39
TPM3-207ENST00000341372 TAGLNQ01995 201 aaKnown RBP12.64□□□□□ -0.39
TPM3-207ENST00000341372 CACNB1Q02641 598 aaPredicted RBP12.64□□□□□ -0.39
TPM3-207ENST00000341372 TFCP2Q12800 502 aa12.64□□□□□ -0.39
TPM3-207ENST00000341372 TBC1D10BQ4KMP7 808 aaPredicted RBP12.64□□□□□ -0.39
TPM3-207ENST00000341372 EPAS1Q99814 870 aa12.64□□□□□ -0.39
TPM3-207ENST00000341372 AKAP2Q9Y2D5 859 aa12.64□□□□□ -0.39
TPM3-207ENST00000341372 POLR2AP24928 1970 aaKnown RBP12.63□□□□□ -0.39
TPM3-207ENST00000341372 TTLL13PA6NNM8 815 aa12.63□□□□□ -0.39
TPM3-207ENST00000341372 RECKO95980 971 aa12.63□□□□□ -0.39
TPM3-207ENST00000341372 VAMP1P23763 118 aa12.63□□□□□ -0.39
TPM3-207ENST00000341372 G3BP1Q13283 466 aaKnown RBP eCLIP12.63□□□□□ -0.391e-6■■■□□ 15.4
TPM3-207ENST00000341372 VPS37DQ86XT2 251 aa12.63□□□□□ -0.39
TPM3-207ENST00000341372 RPAP2Q8IXW5 612 aaPredicted RBP12.63□□□□□ -0.39
TPM3-207ENST00000341372 ZBED3Q96IU2 234 aaPredicted RBP12.63□□□□□ -0.39
TPM3-207ENST00000341372 GPR108Q9NPR9 543 aa12.63□□□□□ -0.39
TPM3-207ENST00000341372 CTDSPL2Q05D32 466 aa12.62□□□□□ -0.39
TPM3-207ENST00000341372 ANKRD13AQ8IZ07 590 aa12.62□□□□□ -0.39
TPM3-207ENST00000341372 OGFOD1Q8N543 542 aa12.62□□□□□ -0.39
TPM3-207ENST00000341372 PCDHGA10Q9Y5H3 936 aa12.62□□□□□ -0.39
TPM3-207ENST00000341372 PITPNM2Q9BZ72 1349 aa12.62□□□□□ -0.39
TPM3-207ENST00000341372 A0A1B0GUL7 405 aa12.62□□□□□ -0.39
TPM3-207ENST00000341372 MFSD14BQ5SR56 506 aa12.62□□□□□ -0.39
TPM3-207ENST00000341372 GIMAP6Q6P9H5 292 aa12.62□□□□□ -0.39
TPM3-207ENST00000341372 TMEM92Q6UXU6 159 aa12.62□□□□□ -0.39
TPM3-207ENST00000341372 KIAA0825Q8IV33 1275 aa12.62□□□□□ -0.39
TPM3-207ENST00000341372 SIRT2Q8IXJ6 389 aa12.62□□□□□ -0.39
TPM3-207ENST00000341372 TBC1D22AQ8WUA7 517 aa12.62□□□□□ -0.39
TPM3-207ENST00000341372 MS4A3Q96HJ5 214 aa12.62□□□□□ -0.39
TPM3-207ENST00000341372 HDAC9Q9UKV0 1011 aa12.62□□□□□ -0.39
TPM3-207ENST00000341372 PDS5AQ29RF7 1337 aaKnown RBP12.61□□□□□ -0.39
TPM3-207ENST00000341372 ATP9BO43861 1147 aa12.61□□□□□ -0.39
TPM3-207ENST00000341372 SURF6O75683 361 aaKnown RBP12.61□□□□□ -0.39
TPM3-207ENST00000341372 BRD2P25440 801 aaKnown RBP12.61□□□□□ -0.39
TPM3-207ENST00000341372 ADORA1P30542 326 aa12.61□□□□□ -0.39
TPM3-207ENST00000341372 GJA5P36382 358 aa12.61□□□□□ -0.39
TPM3-207ENST00000341372 C7P10643 843 aa12.61□□□□□ -0.39
TPM3-207ENST00000341372 PHKA1P46020 1223 aa12.61□□□□□ -0.39
TPM3-207ENST00000341372 TIMM10P62072 90 aa12.61□□□□□ -0.39
TPM3-207ENST00000341372 CCDC102BQ68D86 513 aa12.61□□□□□ -0.39
TPM3-207ENST00000341372 POTEDQ86YR6 584 aa12.61□□□□□ -0.39
TPM3-207ENST00000341372 EPS8L1Q8TE68 723 aa12.61□□□□□ -0.39
TPM3-207ENST00000341372 GGA3Q9NZ52 723 aa12.61□□□□□ -0.39
TPM3-207ENST00000341372 IQSEC3Q9UPP2 1182 aaPredicted RBP12.61□□□□□ -0.39
TPM3-207ENST00000341372 JAG2Q9Y219 1238 aa12.61□□□□□ -0.39
TPM3-207ENST00000341372 SUGT1Q9Y2Z0 365 aa12.61□□□□□ -0.39
TPM3-207ENST00000341372 CEP350Q5VT06 3117 aa12.6□□□□□ -0.39
TPM3-207ENST00000341372 WNT10BO00744 389 aa12.6□□□□□ -0.39
TPM3-207ENST00000341372 HMMRO75330 724 aa12.6□□□□□ -0.39
TPM3-207ENST00000341372 SCARF1Q14162 830 aa12.6□□□□□ -0.39
TPM3-207ENST00000341372 CDC37L1Q7L3B6 337 aa12.6□□□□□ -0.39
TPM3-207ENST00000341372 XAGE2Q96GT9 111 aa12.6□□□□□ -0.39
TPM3-207ENST00000341372 GLIS2Q9BZE0 524 aaPredicted RBP12.6□□□□□ -0.39
TPM3-207ENST00000341372 ASTN2O75129 1339 aaPredicted RBP12.6□□□□□ -0.39
TPM3-207ENST00000341372 SALL1Q9NSC2 1324 aa12.6□□□□□ -0.39
TPM3-207ENST00000341372 TNNI3KQ59H18 835 aa12.59□□□□□ -0.39
TPM3-207ENST00000341372 WDR66Q8TBY9 1149 aa12.59□□□□□ -0.39
TPM3-207ENST00000341372 GNL3LQ9NVN8 582 aaKnown RBP12.59□□□□□ -0.39
TPM3-207ENST00000341372 NOVA2Q9UNW9 492 aaKnown RBP12.59□□□□□ -0.39
TPM3-207ENST00000341372 FPGT-TNNI3KV9GXZ4 949 aa12.59□□□□□ -0.39
TPM3-207ENST00000341372 ANKRD62A6NC57 917 aa12.59□□□□□ -0.39
TPM3-207ENST00000341372 CHAF1AQ13111 956 aaPredicted RBP12.59□□□□□ -0.39
TPM3-207ENST00000341372 OS9Q13438 667 aaPredicted RBP12.59□□□□□ -0.39
TPM3-207ENST00000341372 GRIK5Q16478 980 aa12.59□□□□□ -0.39
TPM3-207ENST00000341372 NBPF9Q3BBW0 867 aa12.59□□□□□ -0.39
TPM3-207ENST00000341372 HSP90AB4PQ58FF6 505 aa12.59□□□□□ -0.39
TPM3-207ENST00000341372 ERC1Q8IUD2 1116 aa12.59□□□□□ -0.39
TPM3-207ENST00000341372 DCPSQ96C86 337 aaKnown RBP12.59□□□□□ -0.39
TPM3-207ENST00000341372 DENND2AQ9ULE3 1009 aa12.59□□□□□ -0.39
TPM3-207ENST00000341372 AKAP11Q9UKA4 1901 aa12.59□□□□□ -0.39
TPM3-207ENST00000341372 TRAF5O00463 557 aa12.58□□□□□ -0.4
TPM3-207ENST00000341372 FRAT2O75474 233 aaPredicted RBP12.58□□□□□ -0.4
TPM3-207ENST00000341372 NCLP19338 710 aaKnown RBP12.58□□□□□ -0.4
TPM3-207ENST00000341372 HDLBPQ00341 1268 aaKnown RBP12.58□□□□□ -0.4
TPM3-207ENST00000341372 RASGRF1Q13972 1273 aa12.58□□□□□ -0.4
TPM3-207ENST00000341372 ANGEL2Q5VTE6 544 aaKnown RBP12.58□□□□□ -0.4
TPM3-207ENST00000341372 DNAJC5GQ8N7S2 189 aa12.58□□□□□ -0.4
TPM3-207ENST00000341372 TTC13Q8NBP0 860 aa12.58□□□□□ -0.4
TPM3-207ENST00000341372 SLAIN1Q8ND83 568 aa12.58□□□□□ -0.4
TPM3-207ENST00000341372 BOLA1Q9Y3E2 137 aa12.58□□□□□ -0.4
TPM3-207ENST00000341372 SOX11P35716 441 aa12.57□□□□□ -0.4
TPM3-207ENST00000341372 SCNN1AP37088 669 aa12.57□□□□□ -0.4
TPM3-207ENST00000341372 CFAP100Q494V2 611 aa12.57□□□□□ -0.4
TPM3-207ENST00000341372 KRT26Q7Z3Y9 468 aa12.57□□□□□ -0.4
TPM3-207ENST00000341372 LRRN4Q8WUT4 740 aa12.57□□□□□ -0.4
TPM3-207ENST00000341372 MRIQ9BWK5 157 aa12.57□□□□□ -0.4
TPM3-207ENST00000341372 TTF2Q9UNY4 1162 aaKnown RBP12.57□□□□□ -0.4
TPM3-207ENST00000341372 EXOC6BQ9Y2D4 811 aa12.57□□□□□ -0.4
TPM3-207ENST00000341372 MAST3O60307 1309 aa12.57□□□□□ -0.4
TPM3-207ENST00000341372 F8W031 263 aaPredicted RBP12.57□□□□□ -0.4
TPM3-207ENST00000341372 HTRA3P83110 453 aa12.57□□□□□ -0.4
TPM3-207ENST00000341372 FMR1Q06787 632 aaKnown RBP eCLIP12.57□□□□□ -0.4
TPM3-207ENST00000341372 SEMA3FQ13275 785 aa12.57□□□□□ -0.4
TPM3-207ENST00000341372 DLGAP5Q15398 846 aa12.57□□□□□ -0.4
TPM3-207ENST00000341372 PRPF38BQ5VTL8 546 aaKnown RBP12.57□□□□□ -0.4
TPM3-207ENST00000341372 CST9Q5W186 159 aa12.57□□□□□ -0.4
TPM3-207ENST00000341372 ADM5C9JUS6 153 aa12.56□□□□□ -0.4
TPM3-207ENST00000341372 USP48Q86UV5 1035 aa12.56□□□□□ -0.4
TPM3-207ENST00000341372 SULF1Q8IWU6 871 aa12.56□□□□□ -0.4
TPM3-207ENST00000341372 ZNF512BQ96KM6 892 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms