RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 C21orf2O43822 256 aa17.59■□□□□ 0.41
BRAT1-201ENST00000340611 ALDH1B1P30837 517 aa17.59■□□□□ 0.41
BRAT1-201ENST00000340611 MECOMQ03112 1051 aa17.59■□□□□ 0.41
BRAT1-201ENST00000340611 DIXDC1Q155Q3 683 aa17.59■□□□□ 0.41
BRAT1-201ENST00000340611 EP400NLQ6ZTU2 488 aa17.59■□□□□ 0.41
BRAT1-201ENST00000340611 FEZ2Q9UHY8 353 aaPredicted RBP17.59■□□□□ 0.41
BRAT1-201ENST00000340611 LARGE1O95461 756 aa17.59■□□□□ 0.41
BRAT1-201ENST00000340611 ATP2B4P23634 1241 aa17.59■□□□□ 0.41
BRAT1-201ENST00000340611 ZSCAN25Q6NSZ9 544 aa17.59■□□□□ 0.41
BRAT1-201ENST00000340611 STRBPQ96SI9 672 aaKnown RBP17.59■□□□□ 0.41
BRAT1-201ENST00000340611 PYCARDQ9ULZ3 195 aa17.59■□□□□ 0.41
BRAT1-201ENST00000340611 WDR33Q9C0J8 1336 aaKnown RBP17.59■□□□□ 0.41
BRAT1-201ENST00000340611 LRRFIP1Q32MZ4 808 aaKnown RBP17.58■□□□□ 0.41
BRAT1-201ENST00000340611 SPC24Q8NBT2 197 aa17.58■□□□□ 0.41
BRAT1-201ENST00000340611 DDX41Q9UJV9 622 aaKnown RBP17.58■□□□□ 0.41
BRAT1-201ENST00000340611 U3KPZ7 1027 aaPredicted RBP17.58■□□□□ 0.41
BRAT1-201ENST00000340611 EVX2Q03828 476 aa17.58■□□□□ 0.4
BRAT1-201ENST00000340611 ZNF804AQ7Z570 1209 aa17.58■□□□□ 0.4
BRAT1-201ENST00000340611 DBNDD1Q9H9R9 158 aa17.58■□□□□ 0.4
BRAT1-201ENST00000340611 DPEP1P16444 411 aa17.58■□□□□ 0.4
BRAT1-201ENST00000340611 CCDC183Q5T5S1 534 aa17.58■□□□□ 0.4
BRAT1-201ENST00000340611 RUFY3Q7L099 469 aa17.58■□□□□ 0.4
BRAT1-201ENST00000340611 TDRD7Q8NHU6 1098 aaKnown RBP17.58■□□□□ 0.4
BRAT1-201ENST00000340611 DSCC1Q9BVC3 393 aa17.58■□□□□ 0.4
BRAT1-201ENST00000340611 EPB41L4AQ9HCS5 686 aaPredicted RBP17.58■□□□□ 0.4
BRAT1-201ENST00000340611 AATFQ9NY61 560 aaKnown RBP eCLIP17.58■□□□□ 0.4
BRAT1-201ENST00000340611 RSPH14Q9UHP6 348 aa17.58■□□□□ 0.4
BRAT1-201ENST00000340611 F8W031 263 aaPredicted RBP17.57■□□□□ 0.4
BRAT1-201ENST00000340611 FIBPO43427 364 aa17.57■□□□□ 0.4
BRAT1-201ENST00000340611 NAA16Q6N069 864 aaPredicted RBP17.57■□□□□ 0.4
BRAT1-201ENST00000340611 TTC14Q96N46 770 aa17.57■□□□□ 0.4
BRAT1-201ENST00000340611 DUOX1Q9NRD9 1551 aa17.57■□□□□ 0.4
BRAT1-201ENST00000340611 HNRNPH2P55795 449 aaKnown RBP17.57■□□□□ 0.4
BRAT1-201ENST00000340611 GTF2IP78347 998 aa17.57■□□□□ 0.4
BRAT1-201ENST00000340611 RNF20Q5VTR2 975 aa17.57■□□□□ 0.4
BRAT1-201ENST00000340611 FAM184AQ8NB25 1140 aa17.57■□□□□ 0.4
BRAT1-201ENST00000340611 KCNB2Q92953 911 aa17.57■□□□□ 0.4
BRAT1-201ENST00000340611 NSUN4Q96CB9 384 aaKnown RBP17.57■□□□□ 0.4
BRAT1-201ENST00000340611 PDRG1Q9NUG6 133 aa17.57■□□□□ 0.4
BRAT1-201ENST00000340611 QSER1Q2KHR3 1735 aa17.57■□□□□ 0.4
BRAT1-201ENST00000340611 GIMAP6Q6P9H5 292 aa17.56■□□□□ 0.4
BRAT1-201ENST00000340611 ZSWIM6Q9HCJ5 1215 aa17.56■□□□□ 0.4
BRAT1-201ENST00000340611 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.56■□□□□ 0.4
BRAT1-201ENST00000340611 CYP46A1Q9Y6A2 500 aa17.56■□□□□ 0.4
BRAT1-201ENST00000340611 SLC4A4Q9Y6R1 1079 aa17.56■□□□□ 0.4
BRAT1-201ENST00000340611 V9GYY5 206 aaPredicted RBP17.56■□□□□ 0.4
BRAT1-201ENST00000340611 UVSSAQ2YD98 709 aa17.56■□□□□ 0.4
BRAT1-201ENST00000340611 GPHNQ9NQX3 736 aaPredicted RBP17.56■□□□□ 0.4
BRAT1-201ENST00000340611 BLOC1S2Q6QNY1 142 aa17.55■□□□□ 0.4
BRAT1-201ENST00000340611 CCDC125Q86Z20 511 aa17.55■□□□□ 0.4
BRAT1-201ENST00000340611 CNPY4Q8N129 248 aa17.55■□□□□ 0.4
BRAT1-201ENST00000340611 ZC3H12CQ9C0D7 883 aaKnown RBP17.55■□□□□ 0.4
BRAT1-201ENST00000340611 NBPF3Q9H094 633 aa17.55■□□□□ 0.4
BRAT1-201ENST00000340611 LAMA4Q16363 1823 aa17.55■□□□□ 0.4
BRAT1-201ENST00000340611 LRRC37AA6NMS7 1700 aa17.55■□□□□ 0.4
BRAT1-201ENST00000340611 LTBP1Q14766 1721 aa17.55■□□□□ 0.4
BRAT1-201ENST00000340611 CYP2D7A0A087X1C5 515 aa17.55■□□□□ 0.4
BRAT1-201ENST00000340611 E7EWF7 191 aa17.55■□□□□ 0.4
BRAT1-201ENST00000340611 EPB41L2O43491 1005 aaKnown RBP17.55■□□□□ 0.4
BRAT1-201ENST00000340611 CTDSPL2Q05D32 466 aa17.55■□□□□ 0.4
BRAT1-201ENST00000340611 SPTLC3Q9NUV7 552 aa17.55■□□□□ 0.4
BRAT1-201ENST00000340611 BAZ2AQ9UIF9 1905 aaKnown RBP17.55■□□□□ 0.4
BRAT1-201ENST00000340611 RPAP1Q9BWH6 1393 aaPredicted RBP17.55■□□□□ 0.4
BRAT1-201ENST00000340611 DZIP1Q86YF9 867 aaKnown RBP17.54■□□□□ 0.4
BRAT1-201ENST00000340611 KRT222Q8N1A0 295 aa17.54■□□□□ 0.4
BRAT1-201ENST00000340611 NECAB1Q8N987 351 aa17.54■□□□□ 0.4
BRAT1-201ENST00000340611 NEK1Q96PY6 1258 aa17.54■□□□□ 0.4
BRAT1-201ENST00000340611 GSG1L2A8MUP6 293 aa17.54■□□□□ 0.4
BRAT1-201ENST00000340611 AP5Z1O43299 807 aa17.54■□□□□ 0.4
BRAT1-201ENST00000340611 KCNA3P22001 575 aa17.54■□□□□ 0.4
BRAT1-201ENST00000340611 STK3Q13188 491 aa17.54■□□□□ 0.4
BRAT1-201ENST00000340611 MAGEB6P1A0A0J9YX57 407 aa17.54■□□□□ 0.4
BRAT1-201ENST00000340611 CTIFO43310 598 aaKnown RBP17.54■□□□□ 0.4
BRAT1-201ENST00000340611 PPFIA3O75145 1194 aa17.54■□□□□ 0.4
BRAT1-201ENST00000340611 TACC3Q9Y6A5 838 aa17.54■□□□□ 0.4
BRAT1-201ENST00000340611 KDM4AO75164 1064 aa17.53■□□□□ 0.4
BRAT1-201ENST00000340611 MFSD14BQ5SR56 506 aa17.53■□□□□ 0.4
BRAT1-201ENST00000340611 STYK1Q6J9G0 422 aa17.53■□□□□ 0.4
BRAT1-201ENST00000340611 TBC1D10CQ8IV04 446 aa17.53■□□□□ 0.4
BRAT1-201ENST00000340611 IFNL3Q8IZI9 196 aa17.53■□□□□ 0.4
BRAT1-201ENST00000340611 KIF18AQ8NI77 898 aa17.53■□□□□ 0.4
BRAT1-201ENST00000340611 TMX4Q9H1E5 349 aaPredicted RBP17.53■□□□□ 0.4
BRAT1-201ENST00000340611 TOMM22Q9NS69 142 aa17.53■□□□□ 0.4
BRAT1-201ENST00000340611 LDHBP07195 334 aaKnown RBP17.53■□□□□ 0.4
BRAT1-201ENST00000340611 AOC3Q16853 763 aa17.53■□□□□ 0.4
BRAT1-201ENST00000340611 IL17RAQ96F46 866 aa17.53■□□□□ 0.4
BRAT1-201ENST00000340611 C16orf45Q96MC5 204 aaPredicted RBP17.53■□□□□ 0.4
BRAT1-201ENST00000340611 RIOK1Q9BRS2 568 aaKnown RBP17.53■□□□□ 0.4
BRAT1-201ENST00000340611 G3V3G9 751 aa17.52■□□□□ 0.4
BRAT1-201ENST00000340611 SEMA3EO15041 775 aa17.52■□□□□ 0.4
BRAT1-201ENST00000340611 ZSCAN22P10073 491 aaPredicted RBP17.52■□□□□ 0.4
BRAT1-201ENST00000340611 RPS6KB1P23443 525 aa17.52■□□□□ 0.4
BRAT1-201ENST00000340611 DCAF8Q5TAQ9 597 aa17.52■□□□□ 0.4
BRAT1-201ENST00000340611 TPCN1Q9ULQ1 816 aa17.52■□□□□ 0.4
BRAT1-201ENST00000340611 TCHHQ07283 1943 aa17.52■□□□□ 0.4
BRAT1-201ENST00000340611 GYS2P54840 703 aa17.52■□□□□ 0.4
BRAT1-201ENST00000340611 RAD51AP2Q09MP3 1159 aa17.52■□□□□ 0.4
BRAT1-201ENST00000340611 RAB11FIP4Q86YS3 637 aa17.52■□□□□ 0.4
BRAT1-201ENST00000340611 MORC2Q9Y6X9 1032 aaPredicted RBP17.52■□□□□ 0.4
BRAT1-201ENST00000340611 MINDY4BA8MYZ0 360 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms