RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 RGS3P49796 1198 aa16.3■□□□□ 0.2
SIRPB3P-201ENST00000340424 TBC1D9Q6ZT07 1266 aa16.3■□□□□ 0.2
SIRPB3P-201ENST00000340424 AACSQ86V21 672 aa16.3■□□□□ 0.2
SIRPB3P-201ENST00000340424 ERO1BQ86YB8 467 aa16.3■□□□□ 0.2
SIRPB3P-201ENST00000340424 IFNL1Q8IU54 200 aa16.3■□□□□ 0.2
SIRPB3P-201ENST00000340424 CCDC8Q9H0W5 538 aaPredicted RBP16.3■□□□□ 0.2
SIRPB3P-201ENST00000340424 COL2A1P02458 1487 aaPredicted RBP16.29■□□□□ 0.2
SIRPB3P-201ENST00000340424 DOCK2Q92608 1830 aa16.29■□□□□ 0.2
SIRPB3P-201ENST00000340424 WDHD1O75717 1129 aaPredicted RBP16.29■□□□□ 0.2
SIRPB3P-201ENST00000340424 BAG3O95817 575 aa16.29■□□□□ 0.2
SIRPB3P-201ENST00000340424 CYP2E1P05181 493 aaPredicted RBP16.29■□□□□ 0.2
SIRPB3P-201ENST00000340424 GTF2A2P52657 109 aa16.29■□□□□ 0.2
SIRPB3P-201ENST00000340424 C20orf194Q5TEA3 1177 aa16.29■□□□□ 0.2
SIRPB3P-201ENST00000340424 NAA16Q6N069 864 aaPredicted RBP16.29■□□□□ 0.2
SIRPB3P-201ENST00000340424 CERS3Q8IU89 383 aa16.29■□□□□ 0.2
SIRPB3P-201ENST00000340424 SIRT2Q8IXJ6 389 aa16.29■□□□□ 0.2
SIRPB3P-201ENST00000340424 ZNF384Q8TF68 577 aa16.29■□□□□ 0.2
SIRPB3P-201ENST00000340424 TLR7Q9NYK1 1049 aaKnown RBP16.29■□□□□ 0.2
SIRPB3P-201ENST00000340424 ZNF112Q9UJU3 913 aa16.29■□□□□ 0.2
SIRPB3P-201ENST00000340424 SNCAIPQ9Y6H5 919 aa16.29■□□□□ 0.2
SIRPB3P-201ENST00000340424 CASP8AP2Q9UKL3 1982 aa16.29■□□□□ 0.2
SIRPB3P-201ENST00000340424 ATRNL1Q5VV63 1379 aa16.28■□□□□ 0.2
SIRPB3P-201ENST00000340424 GJA5P36382 358 aa16.28■□□□□ 0.2
SIRPB3P-201ENST00000340424 RHBDL3P58872 404 aa16.28■□□□□ 0.2
SIRPB3P-201ENST00000340424 SNRKQ9NRH2 765 aa16.28■□□□□ 0.2
SIRPB3P-201ENST00000340424 AK9Q5TCS8 1911 aa16.27■□□□□ 0.2
SIRPB3P-201ENST00000340424 ZAP70P43403 619 aa16.27■□□□□ 0.2
SIRPB3P-201ENST00000340424 VASPP50552 380 aaPredicted RBP16.27■□□□□ 0.2
SIRPB3P-201ENST00000340424 MAP3K10Q02779 954 aa16.27■□□□□ 0.2
SIRPB3P-201ENST00000340424 PPATQ06203 517 aa16.27■□□□□ 0.2
SIRPB3P-201ENST00000340424 PPIL2Q13356 520 aa16.27■□□□□ 0.2
SIRPB3P-201ENST00000340424 NOL9Q5SY16 702 aaKnown RBP16.27■□□□□ 0.2
SIRPB3P-201ENST00000340424 MIGA2Q7L4E1 593 aa16.27■□□□□ 0.2
SIRPB3P-201ENST00000340424 ZSCAN29Q8IWY8 852 aaPredicted RBP16.27■□□□□ 0.2
SIRPB3P-201ENST00000340424 SPDYE1Q8NFV5 336 aaPredicted RBP16.27■□□□□ 0.2
SIRPB3P-201ENST00000340424 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.27■□□□□ 0.2
SIRPB3P-201ENST00000340424 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.27■□□□□ 0.2
SIRPB3P-201ENST00000340424 GPR25O00155 361 aa16.26■□□□□ 0.19
SIRPB3P-201ENST00000340424 TBC1D8O95759 1140 aa16.26■□□□□ 0.19
SIRPB3P-201ENST00000340424 IFIT2P09913 472 aaKnown RBP16.26■□□□□ 0.19
SIRPB3P-201ENST00000340424 CETPP11597 493 aa16.26■□□□□ 0.19
SIRPB3P-201ENST00000340424 PPP4CP60510 307 aa16.26■□□□□ 0.19
SIRPB3P-201ENST00000340424 TTF1Q15361 905 aaPredicted RBP16.26■□□□□ 0.19
SIRPB3P-201ENST00000340424 ZKSCAN4Q969J2 545 aaPredicted RBP16.26■□□□□ 0.19
SIRPB3P-201ENST00000340424 OTUD5Q96G74 571 aa16.26■□□□□ 0.19
SIRPB3P-201ENST00000340424 ABHD8Q96I13 439 aa16.26■□□□□ 0.19
SIRPB3P-201ENST00000340424 MS4A4AQ96JQ5 239 aa16.26■□□□□ 0.19
SIRPB3P-201ENST00000340424 IL1RAPL2Q9NP60 686 aa16.26■□□□□ 0.19
SIRPB3P-201ENST00000340424 ZCCHC17Q9NP64 241 aaKnown RBP16.26■□□□□ 0.19
SIRPB3P-201ENST00000340424 IGF2BP3O00425 579 aaKnown RBP eCLIP16.25■□□□□ 0.19
SIRPB3P-201ENST00000340424 TBC1D12O60347 775 aa16.25■□□□□ 0.19
SIRPB3P-201ENST00000340424 MAP3K12Q12852 859 aa16.25■□□□□ 0.19
SIRPB3P-201ENST00000340424 SNAPC2Q13487 334 aa16.25■□□□□ 0.19
SIRPB3P-201ENST00000340424 PICALMQ13492 652 aa16.25■□□□□ 0.19
SIRPB3P-201ENST00000340424 DGKZQ13574 1117 aa16.25■□□□□ 0.19
SIRPB3P-201ENST00000340424 CTU1Q7Z7A3 348 aaKnown RBP16.25■□□□□ 0.19
SIRPB3P-201ENST00000340424 ZFPM1Q8IX07 1006 aa16.25■□□□□ 0.19
SIRPB3P-201ENST00000340424 TEX11Q8IYF3 940 aa16.25■□□□□ 0.19
SIRPB3P-201ENST00000340424 MCOLN1Q9GZU1 580 aa16.25■□□□□ 0.19
SIRPB3P-201ENST00000340424 DDX4Q9NQI0 724 aaKnown RBP16.25■□□□□ 0.19
SIRPB3P-201ENST00000340424 CCL15-CCL14A0A0B4J2E2 113 aa16.24■□□□□ 0.19
SIRPB3P-201ENST00000340424 PKN2Q16513 984 aaKnown RBP16.24■□□□□ 0.19
SIRPB3P-201ENST00000340424 CCL15Q16663 113 aa16.24■□□□□ 0.19
SIRPB3P-201ENST00000340424 SH3BP5LQ7L8J4 393 aa16.24■□□□□ 0.19
SIRPB3P-201ENST00000340424 ZNF296Q8WUU4 475 aaPredicted RBP16.24■□□□□ 0.19
SIRPB3P-201ENST00000340424 OSBPL5Q9H0X9 879 aaPredicted RBP16.24■□□□□ 0.19
SIRPB3P-201ENST00000340424 PIH1D3Q9NQM4 214 aaKnown RBP16.24■□□□□ 0.19
SIRPB3P-201ENST00000340424 DDTLA6NHG4 134 aaPredicted RBP16.23■□□□□ 0.19
SIRPB3P-201ENST00000340424 PHF20L1A8MW92 1017 aa16.23■□□□□ 0.19
SIRPB3P-201ENST00000340424 APBB1O00213 710 aa16.23■□□□□ 0.19
SIRPB3P-201ENST00000340424 FKTNO75072 461 aa16.23■□□□□ 0.19
SIRPB3P-201ENST00000340424 IDH1O75874 414 aaKnown RBP16.23■□□□□ 0.19
SIRPB3P-201ENST00000340424 INPP5BP32019 993 aa16.23■□□□□ 0.19
SIRPB3P-201ENST00000340424 RRP1P56182 461 aaKnown RBP16.23■□□□□ 0.19
SIRPB3P-201ENST00000340424 BRI3BPQ8WY22 251 aa16.23■□□□□ 0.19
SIRPB3P-201ENST00000340424 LRRCC1Q9C099 1032 aa16.23■□□□□ 0.19
SIRPB3P-201ENST00000340424 DHX36Q9H2U1 1008 aaKnown RBP16.23■□□□□ 0.19
SIRPB3P-201ENST00000340424 AATFQ9NY61 560 aaKnown RBP eCLIP16.23■□□□□ 0.19
SIRPB3P-201ENST00000340424 IRF6O14896 467 aa16.22■□□□□ 0.19
SIRPB3P-201ENST00000340424 CTNND1O60716 968 aaKnown RBP16.22■□□□□ 0.19
SIRPB3P-201ENST00000340424 SCYL3Q8IZE3 742 aa16.22■□□□□ 0.19
SIRPB3P-201ENST00000340424 SH3RF3Q8TEJ3 882 aaPredicted RBP16.22■□□□□ 0.19
SIRPB3P-201ENST00000340424 PTPN18Q99952 460 aa16.22■□□□□ 0.19
SIRPB3P-201ENST00000340424 PICK1Q9NRD5 415 aa16.22■□□□□ 0.19
SIRPB3P-201ENST00000340424 HERC5Q9UII4 1024 aaKnown RBP16.22■□□□□ 0.19
SIRPB3P-201ENST00000340424 KCNH4Q9UQ05 1017 aa16.22■□□□□ 0.19
SIRPB3P-201ENST00000340424 CYP7A1P22680 504 aa16.21■□□□□ 0.19
SIRPB3P-201ENST00000340424 CRHR2Q13324 411 aa16.21■□□□□ 0.19
SIRPB3P-201ENST00000340424 PI4KBQ9UBF8 816 aa16.21■□□□□ 0.19
SIRPB3P-201ENST00000340424 FOCADQ5VW36 1801 aa16.21■□□□□ 0.19
SIRPB3P-201ENST00000340424 MYO5AQ9Y4I1 1855 aaKnown RBP16.2■□□□□ 0.18
SIRPB3P-201ENST00000340424 CXCL11O14625 94 aa16.2■□□□□ 0.18
SIRPB3P-201ENST00000340424 ATP5JP18859 108 aa16.2■□□□□ 0.18
SIRPB3P-201ENST00000340424 ADGRA1Q86SQ6 560 aa16.2■□□□□ 0.18
SIRPB3P-201ENST00000340424 MAGEB6Q8N7X4 407 aa16.2■□□□□ 0.18
SIRPB3P-201ENST00000340424 TBC1D2Q9BYX2 928 aa16.2■□□□□ 0.18
SIRPB3P-201ENST00000340424 DCTPP1Q9H773 170 aa16.2■□□□□ 0.18
SIRPB3P-201ENST00000340424 ZFYVE28Q9HCC9 887 aa16.2■□□□□ 0.18
SIRPB3P-201ENST00000340424 DOCK1Q14185 1865 aa16.2■□□□□ 0.18
SIRPB3P-201ENST00000340424 FLT1P17948 1338 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms