RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 DCP1AQ9NPI6 582 aaPredicted RBP8.46□□□□□ -1.05
NUP43-201ENST00000340413 CDKL5O76039 1030 aa8.46□□□□□ -1.06
NUP43-201ENST00000340413 SMARCA1P28370 1054 aa8.46□□□□□ -1.06
NUP43-201ENST00000340413 RHBDL3P58872 404 aa8.46□□□□□ -1.06
NUP43-201ENST00000340413 RAB3GAP1Q15042 981 aa8.46□□□□□ -1.06
NUP43-201ENST00000340413 C12orf60Q5U649 245 aa8.46□□□□□ -1.06
NUP43-201ENST00000340413 TTLL5Q6EMB2 1281 aa8.46□□□□□ -1.06
NUP43-201ENST00000340413 MFSD6Q6ZSS7 791 aa8.46□□□□□ -1.06
NUP43-201ENST00000340413 CCDC24Q8N4L8 307 aa8.46□□□□□ -1.06
NUP43-201ENST00000340413 SMARCC2Q8TAQ2 1214 aa8.46□□□□□ -1.06
NUP43-201ENST00000340413 DPF2Q92785 391 aa8.46□□□□□ -1.06
NUP43-201ENST00000340413 GTF3C6Q969F1 213 aa8.46□□□□□ -1.06
NUP43-201ENST00000340413 ZBED3Q96IU2 234 aaPredicted RBP8.46□□□□□ -1.06
NUP43-201ENST00000340413 ABCF2Q9UG63 623 aa8.46□□□□□ -1.06
NUP43-201ENST00000340413 G3V3G9 751 aa8.46□□□□□ -1.06
NUP43-201ENST00000340413 SH2B2O14492 632 aaPredicted RBP8.46□□□□□ -1.06
NUP43-201ENST00000340413 DDAH1O94760 285 aa8.46□□□□□ -1.06
NUP43-201ENST00000340413 TDO2P48775 406 aa8.46□□□□□ -1.06
NUP43-201ENST00000340413 DCAF8Q5TAQ9 597 aa8.46□□□□□ -1.06
NUP43-201ENST00000340413 STOX1Q6ZVD7 989 aa8.46□□□□□ -1.06
NUP43-201ENST00000340413 TTC6Q86TZ1 520 aa8.46□□□□□ -1.06
NUP43-201ENST00000340413 NBPF3Q9H094 633 aa8.46□□□□□ -1.06
NUP43-201ENST00000340413 TAOK3Q9H2K8 898 aa8.46□□□□□ -1.06
NUP43-201ENST00000340413 RBM27Q9P2N5 1060 aaKnown RBP8.46□□□□□ -1.06
NUP43-201ENST00000340413 PRDX5P30044 214 aa8.45□□□□□ -1.06
NUP43-201ENST00000340413 CHRNA5P30532 468 aa8.45□□□□□ -1.06
NUP43-201ENST00000340413 ZNF280AP59817 542 aaPredicted RBP8.45□□□□□ -1.06
NUP43-201ENST00000340413 ATL3Q6DD88 541 aa8.45□□□□□ -1.06
NUP43-201ENST00000340413 CTR9Q6PD62 1173 aa8.45□□□□□ -1.06
NUP43-201ENST00000340413 C16orf86Q6ZW13 317 aa8.45□□□□□ -1.06
NUP43-201ENST00000340413 NIM1KQ8IY84 436 aa8.45□□□□□ -1.06
NUP43-201ENST00000340413 ANGEL1Q9UNK9 670 aaKnown RBP8.45□□□□□ -1.06
NUP43-201ENST00000340413 NDUFB9Q9Y6M9 179 aa8.45□□□□□ -1.06
NUP43-201ENST00000340413 MORC2Q9Y6X9 1032 aaPredicted RBP8.45□□□□□ -1.06
NUP43-201ENST00000340413 ADCK5Q3MIX3 580 aa8.45□□□□□ -1.06
NUP43-201ENST00000340413 ADGRA1Q86SQ6 560 aa8.45□□□□□ -1.06
NUP43-201ENST00000340413 RBM28Q9NW13 759 aaKnown RBP8.45□□□□□ -1.06
NUP43-201ENST00000340413 DAGLAQ9Y4D2 1042 aa8.45□□□□□ -1.06
NUP43-201ENST00000340413 BAZ2AQ9UIF9 1905 aaKnown RBP8.45□□□□□ -1.06
NUP43-201ENST00000340413 CCDC196A0A1B0GTZ2 297 aa8.45□□□□□ -1.06
NUP43-201ENST00000340413 BTDP43251 543 aa8.45□□□□□ -1.06
NUP43-201ENST00000340413 DGKHQ86XP1 1220 aa8.45□□□□□ -1.06
NUP43-201ENST00000340413 SNAP23O00161 211 aa8.44□□□□□ -1.06
NUP43-201ENST00000340413 PPIP5K2O43314 1243 aa8.44□□□□□ -1.06
NUP43-201ENST00000340413 CHAF1AQ13111 956 aaPredicted RBP8.44□□□□□ -1.06
NUP43-201ENST00000340413 RCSD1Q6JBY9 416 aa8.44□□□□□ -1.06
NUP43-201ENST00000340413 FAM83AQ86UY5 434 aa8.44□□□□□ -1.06
NUP43-201ENST00000340413 WDR33Q9C0J8 1336 aaKnown RBP8.44□□□□□ -1.06
NUP43-201ENST00000340413 COL4A5P29400 1685 aa8.44□□□□□ -1.06
NUP43-201ENST00000340413 PRC1O43663 620 aa8.44□□□□□ -1.06
NUP43-201ENST00000340413 TBC1D12O60347 775 aa8.44□□□□□ -1.06
NUP43-201ENST00000340413 GTF2IP78347 998 aa8.44□□□□□ -1.06
NUP43-201ENST00000340413 CCDC17Q96LX7 622 aa8.44□□□□□ -1.06
NUP43-201ENST00000340413 LZTS2Q9BRK4 669 aa8.44□□□□□ -1.06
NUP43-201ENST00000340413 ATP6V1DQ9Y5K8 247 aa8.44□□□□□ -1.06
NUP43-201ENST00000340413 PPP2R3BQ9Y5P8 575 aa8.44□□□□□ -1.06
NUP43-201ENST00000340413 FZD9O00144 591 aa8.44□□□□□ -1.06
NUP43-201ENST00000340413 R3HDM1Q15032 1099 aaKnown RBP8.44□□□□□ -1.06
NUP43-201ENST00000340413 Q6ZUG5 572 aa8.44□□□□□ -1.06
NUP43-201ENST00000340413 TBC1D10CQ8IV04 446 aa8.44□□□□□ -1.06
NUP43-201ENST00000340413 HOOK2Q96ED9 719 aa8.44□□□□□ -1.06
NUP43-201ENST00000340413 ADAMTSL1Q8N6G6 1762 aa8.44□□□□□ -1.06
NUP43-201ENST00000340413 FLT1P17948 1338 aa8.43□□□□□ -1.06
NUP43-201ENST00000340413 CRKP46108 304 aa8.43□□□□□ -1.06
NUP43-201ENST00000340413 CPLX2Q6PUV4 134 aaKnown RBP8.43□□□□□ -1.06
NUP43-201ENST00000340413 IGDCC4Q8TDY8 1250 aa8.43□□□□□ -1.06
NUP43-201ENST00000340413 WASF1Q92558 559 aa8.43□□□□□ -1.06
NUP43-201ENST00000340413 SCN4AP35499 1836 aa8.43□□□□□ -1.06
NUP43-201ENST00000340413 ERICH2A1L162 156 aa8.43□□□□□ -1.06
NUP43-201ENST00000340413 MAP3K10Q02779 954 aa8.43□□□□□ -1.06
NUP43-201ENST00000340413 GABPAQ06546 454 aa8.43□□□□□ -1.06
NUP43-201ENST00000340413 ILDR2Q71H61 639 aa8.43□□□□□ -1.06
NUP43-201ENST00000340413 FOXP4Q8IVH2 680 aaPredicted RBP8.43□□□□□ -1.06
NUP43-201ENST00000340413 TEX11Q8IYF3 940 aa8.43□□□□□ -1.06
NUP43-201ENST00000340413 CERS5Q8N5B7 392 aa8.43□□□□□ -1.06
NUP43-201ENST00000340413 ANP32EQ9BTT0 268 aa8.43□□□□□ -1.06
NUP43-201ENST00000340413 WDR90Q96KV7 1748 aa8.43□□□□□ -1.06
NUP43-201ENST00000340413 PAPPA2Q9BXP8 1791 aa8.43□□□□□ -1.06
NUP43-201ENST00000340413 CD2BP2O95400 341 aaKnown RBP8.43□□□□□ -1.06
NUP43-201ENST00000340413 USP5P45974 858 aa8.43□□□□□ -1.06
NUP43-201ENST00000340413 ANTXR2P58335 489 aa8.43□□□□□ -1.06
NUP43-201ENST00000340413 SEC23AQ15436 765 aa8.43□□□□□ -1.06
NUP43-201ENST00000340413 GBP4Q96PP9 640 aa8.43□□□□□ -1.06
NUP43-201ENST00000340413 C21orf2O43822 256 aa8.42□□□□□ -1.06
NUP43-201ENST00000340413 BRD1O95696 1058 aa8.42□□□□□ -1.06
NUP43-201ENST00000340413 APPP05067 770 aa8.42□□□□□ -1.06
NUP43-201ENST00000340413 HLA-DOAP06340 250 aa8.42□□□□□ -1.06
NUP43-201ENST00000340413 GNAQP50148 359 aa8.42□□□□□ -1.06
NUP43-201ENST00000340413 IQCA1Q86XH1 822 aa8.42□□□□□ -1.06
NUP43-201ENST00000340413 MAF1Q9H063 256 aa8.42□□□□□ -1.06
NUP43-201ENST00000340413 TTF2Q9UNY4 1162 aaKnown RBP8.42□□□□□ -1.06
NUP43-201ENST00000340413 PITPNM2Q9BZ72 1349 aa8.42□□□□□ -1.06
NUP43-201ENST00000340413 DDX11L8A8MPP1 907 aa8.42□□□□□ -1.06
NUP43-201ENST00000340413 CSPP1Q1MSJ5 1256 aa8.42□□□□□ -1.06
NUP43-201ENST00000340413 APOBEC3HQ6NTF7 200 aaKnown RBP8.42□□□□□ -1.06
NUP43-201ENST00000340413 OSBPL5Q9H0X9 879 aaPredicted RBP8.42□□□□□ -1.06
NUP43-201ENST00000340413 LY9Q9HBG7 655 aa8.42□□□□□ -1.06
NUP43-201ENST00000340413 HERC5Q9UII4 1024 aaKnown RBP8.42□□□□□ -1.06
NUP43-201ENST00000340413 TPCN1Q9ULQ1 816 aa8.42□□□□□ -1.06
NUP43-201ENST00000340413 hCG_1984214I3L0E3 225 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms