RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 MAP3K11Q16584 847 aa18.48■□□□□ 0.55
UBE3B-201ENST00000340074 JMYQ8N9B5 988 aa18.48■□□□□ 0.55
UBE3B-201ENST00000340074 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.48■□□□□ 0.55
UBE3B-201ENST00000340074 NAV1Q8NEY1 1877 aa18.47■□□□□ 0.55
UBE3B-201ENST00000340074 AOC2O75106 756 aa18.47■□□□□ 0.55
UBE3B-201ENST00000340074 NPM3O75607 178 aaKnown RBP18.47■□□□□ 0.55
UBE3B-201ENST00000340074 CHGBP05060 677 aa18.47■□□□□ 0.55
UBE3B-201ENST00000340074 CENPBP07199 599 aaPredicted RBP18.47■□□□□ 0.55
UBE3B-201ENST00000340074 ADD2P35612 726 aa18.47■□□□□ 0.55
UBE3B-201ENST00000340074 IREB2P48200 963 aaKnown RBP18.47■□□□□ 0.55
UBE3B-201ENST00000340074 PDE1AP54750 535 aa18.47■□□□□ 0.55
UBE3B-201ENST00000340074 SLFNL1Q499Z3 407 aa18.47■□□□□ 0.55
UBE3B-201ENST00000340074 LDLRAD1Q5T700 205 aa18.47■□□□□ 0.55
UBE3B-201ENST00000340074 STAP2Q9UGK3 403 aa18.47■□□□□ 0.55
UBE3B-201ENST00000340074 SIPA1L1O43166 1804 aa18.47■□□□□ 0.55
UBE3B-201ENST00000340074 DDTLA6NHG4 134 aaPredicted RBP18.46■□□□□ 0.55
UBE3B-201ENST00000340074 FAM155AB1AL88 458 aaPredicted RBP18.46■□□□□ 0.55
UBE3B-201ENST00000340074 MIGA2Q7L4E1 593 aa18.46■□□□□ 0.55
UBE3B-201ENST00000340074 SH3BP5LQ7L8J4 393 aa18.46■□□□□ 0.55
UBE3B-201ENST00000340074 ZSCAN29Q8IWY8 852 aaPredicted RBP18.46■□□□□ 0.55
UBE3B-201ENST00000340074 KBTBD3Q8NAB2 608 aa18.46■□□□□ 0.55
UBE3B-201ENST00000340074 TGFBRAP1Q8WUH2 860 aa18.46■□□□□ 0.55
UBE3B-201ENST00000340074 CCDC102AQ96A19 550 aa18.46■□□□□ 0.55
UBE3B-201ENST00000340074 HOOK2Q96ED9 719 aa18.46■□□□□ 0.55
UBE3B-201ENST00000340074 CSRNP1Q96S65 589 aa18.46■□□□□ 0.55
UBE3B-201ENST00000340074 BAZ2AQ9UIF9 1905 aaKnown RBP18.45■□□□□ 0.54
UBE3B-201ENST00000340074 RASAL3Q86YV0 1011 aa18.45■□□□□ 0.54
UBE3B-201ENST00000340074 CERS3Q8IU89 383 aa18.45■□□□□ 0.54
UBE3B-201ENST00000340074 RIOK1Q9BRS2 568 aaKnown RBP18.45■□□□□ 0.54
UBE3B-201ENST00000340074 OSBPL5Q9H0X9 879 aaPredicted RBP18.45■□□□□ 0.54
UBE3B-201ENST00000340074 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.45■□□□□ 0.54
UBE3B-201ENST00000340074 LAMB1P07942 1786 aa18.45■□□□□ 0.54
UBE3B-201ENST00000340074 ATRNL1Q5VV63 1379 aa18.44■□□□□ 0.54
UBE3B-201ENST00000340074 MAGEB6P1A0A0J9YX57 407 aa18.44■□□□□ 0.54
UBE3B-201ENST00000340074 SLC10A3P09131 477 aa18.44■□□□□ 0.54
UBE3B-201ENST00000340074 DCAF15Q66K64 600 aa18.44■□□□□ 0.54
UBE3B-201ENST00000340074 MAPKAPK5Q8IW41 473 aa18.44■□□□□ 0.54
UBE3B-201ENST00000340074 CLMNQ96JQ2 1002 aa18.44■□□□□ 0.54
UBE3B-201ENST00000340074 ATAD5Q96QE3 1844 aa18.44■□□□□ 0.54
UBE3B-201ENST00000340074 COL2A1P02458 1487 aaPredicted RBP18.44■□□□□ 0.54
UBE3B-201ENST00000340074 FLT1P17948 1338 aa18.43■□□□□ 0.54
UBE3B-201ENST00000340074 UBE3CQ15386 1083 aa18.43■□□□□ 0.54
UBE3B-201ENST00000340074 ZSCAN25Q6NSZ9 544 aa18.43■□□□□ 0.54
UBE3B-201ENST00000340074 ANKRD13AQ8IZ07 590 aa18.43■□□□□ 0.54
UBE3B-201ENST00000340074 ZIC5Q96T25 663 aa18.43■□□□□ 0.54
UBE3B-201ENST00000340074 DDX60LQ5H9U9 1706 aaKnown RBP18.43■□□□□ 0.54
UBE3B-201ENST00000340074 MAP2K2P36507 400 aa18.42■□□□□ 0.54
UBE3B-201ENST00000340074 NOGQ13253 232 aa18.42■□□□□ 0.54
UBE3B-201ENST00000340074 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.42■□□□□ 0.54
UBE3B-201ENST00000340074 PLEKHM2Q8IWE5 1019 aa18.42■□□□□ 0.54
UBE3B-201ENST00000340074 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.42■□□□□ 0.54
UBE3B-201ENST00000340074 SLC10A4Q96EP9 437 aa18.42■□□□□ 0.54
UBE3B-201ENST00000340074 WRNIP1Q96S55 665 aa18.42■□□□□ 0.54
UBE3B-201ENST00000340074 ZNF341Q9BYN7 854 aa18.42■□□□□ 0.54
UBE3B-201ENST00000340074 UNCXA6NJT0 531 aa18.41■□□□□ 0.54
UBE3B-201ENST00000340074 SLURP2P0DP57 97 aa18.41■□□□□ 0.54
UBE3B-201ENST00000340074 USP5P45974 858 aa18.41■□□□□ 0.54
UBE3B-201ENST00000340074 MAP3K9P80192 1104 aa18.41■□□□□ 0.54
UBE3B-201ENST00000340074 LCORLQ8N3X6 602 aa18.41■□□□□ 0.54
UBE3B-201ENST00000340074 DOCK1Q14185 1865 aa18.41■□□□□ 0.54
UBE3B-201ENST00000340074 MBD4O95243 580 aa18.4■□□□□ 0.54
UBE3B-201ENST00000340074 MKRN3Q13064 507 aaKnown RBP18.4■□□□□ 0.54
UBE3B-201ENST00000340074 VGLL4Q14135 290 aa18.4■□□□□ 0.54
UBE3B-201ENST00000340074 ZKSCAN4Q969J2 545 aaPredicted RBP18.4■□□□□ 0.54
UBE3B-201ENST00000340074 FSD1Q9BTV5 496 aa18.4■□□□□ 0.54
UBE3B-201ENST00000340074 PUS7LQ9H0K6 701 aaKnown RBP18.4■□□□□ 0.54
UBE3B-201ENST00000340074 ARMT1Q9H993 441 aa18.4■□□□□ 0.54
UBE3B-201ENST00000340074 SAP30BPQ9UHR5 308 aaKnown RBP18.4■□□□□ 0.54
UBE3B-201ENST00000340074 MYH8P13535 1937 aa18.4■□□□□ 0.54
UBE3B-201ENST00000340074 RNF113AO15541 343 aaKnown RBP18.4■□□□□ 0.54
UBE3B-201ENST00000340074 NEFLP07196 543 aa18.4■□□□□ 0.54
UBE3B-201ENST00000340074 PDE4AP27815 886 aa18.4■□□□□ 0.54
UBE3B-201ENST00000340074 KIF23Q02241 960 aaPredicted RBP18.4■□□□□ 0.54
UBE3B-201ENST00000340074 MAP3K10Q02779 954 aa18.4■□□□□ 0.54
UBE3B-201ENST00000340074 CRNKL1Q9BZJ0 848 aaKnown RBP18.4■□□□□ 0.54
UBE3B-201ENST00000340074 DHX36Q9H2U1 1008 aaKnown RBP18.4■□□□□ 0.54
UBE3B-201ENST00000340074 OSBPL3Q9H4L5 887 aa18.4■□□□□ 0.54
UBE3B-201ENST00000340074 ELP3Q9H9T3 547 aa18.4■□□□□ 0.54
UBE3B-201ENST00000340074 ZNF112Q9UJU3 913 aa18.4■□□□□ 0.54
UBE3B-201ENST00000340074 PALD1Q9ULE6 856 aa18.4■□□□□ 0.54
UBE3B-201ENST00000340074 CSADQ9Y600 493 aa18.4■□□□□ 0.54
UBE3B-201ENST00000340074 ZFYP08048 801 aaPredicted RBP18.39■□□□□ 0.53
UBE3B-201ENST00000340074 INPP5BP32019 993 aa18.39■□□□□ 0.53
UBE3B-201ENST00000340074 SLC4A8Q2Y0W8 1093 aa18.39■□□□□ 0.53
UBE3B-201ENST00000340074 SDR42E1Q8WUS8 393 aa18.39■□□□□ 0.53
UBE3B-201ENST00000340074 EVI5LQ96CN4 794 aa18.39■□□□□ 0.53
UBE3B-201ENST00000340074 WNK4Q96J92 1243 aa18.39■□□□□ 0.53
UBE3B-201ENST00000340074 PHIPQ8WWQ0 1821 aa18.38■□□□□ 0.53
UBE3B-201ENST00000340074 FAM196BA6NMK8 535 aa18.38■□□□□ 0.53
UBE3B-201ENST00000340074 PHF20L1A8MW92 1017 aa18.38■□□□□ 0.53
UBE3B-201ENST00000340074 TBC1D12O60347 775 aa18.38■□□□□ 0.53
UBE3B-201ENST00000340074 MAP2K1Q02750 393 aaPredicted RBP18.38■□□□□ 0.53
UBE3B-201ENST00000340074 LRRFIP1Q32MZ4 808 aaKnown RBP18.38■□□□□ 0.53
UBE3B-201ENST00000340074 SPRYD7Q5W111 196 aa18.38■□□□□ 0.53
UBE3B-201ENST00000340074 APPBP2Q92624 585 aa18.38■□□□□ 0.53
UBE3B-201ENST00000340074 AIDAQ96BJ3 306 aa18.38■□□□□ 0.53
UBE3B-201ENST00000340074 PI4KBQ9UBF8 816 aa18.38■□□□□ 0.53
UBE3B-201ENST00000340074 SNCAIPQ9Y6H5 919 aa18.38■□□□□ 0.53
UBE3B-201ENST00000340074 TRIM6-TRIM34B2RNG4 842 aa18.37■□□□□ 0.53
UBE3B-201ENST00000340074 PRKAB2O43741 272 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms