RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 POLE2P56282 527 aa14.26□□□□□ -0.13
USP47-202ENST00000339865 BSPRYQ5W0U4 402 aa14.26□□□□□ -0.13
USP47-202ENST00000339865 DCLK2Q8N568 766 aa14.26□□□□□ -0.13
USP47-202ENST00000339865 USP6NLQ92738 828 aa14.26□□□□□ -0.13
USP47-202ENST00000339865 RGS16O15492 202 aaPredicted RBP14.26□□□□□ -0.13
USP47-202ENST00000339865 MAN1A2O60476 641 aa14.26□□□□□ -0.13
USP47-202ENST00000339865 SLC8A3P57103 927 aa14.26□□□□□ -0.13
USP47-202ENST00000339865 KLHL7Q8IXQ5 586 aa14.26□□□□□ -0.13
USP47-202ENST00000339865 HMG20BQ9P0W2 317 aa14.26□□□□□ -0.13
USP47-202ENST00000339865 ATP1A2P50993 1020 aa14.26□□□□□ -0.13
USP47-202ENST00000339865 WDR44Q5JSH3 913 aa14.26□□□□□ -0.13
USP47-202ENST00000339865 SNRKQ9NRH2 765 aa14.26□□□□□ -0.13
USP47-202ENST00000339865 EPS15L1Q9UBC2 864 aa14.26□□□□□ -0.13
USP47-202ENST00000339865 DTHD1Q6ZMT9 781 aa14.26□□□□□ -0.13
USP47-202ENST00000339865 F8W031 263 aaPredicted RBP14.26□□□□□ -0.13
USP47-202ENST00000339865 PLCB4Q15147 1175 aa14.26□□□□□ -0.13
USP47-202ENST00000339865 NLRP7Q8WX94 980 aa14.26□□□□□ -0.13
USP47-202ENST00000339865 CTNND2Q9UQB3 1225 aa14.26□□□□□ -0.13
USP47-202ENST00000339865 F6X3S4 739 aa14.25□□□□□ -0.13
USP47-202ENST00000339865 EPB41P11171 864 aaKnown RBP14.25□□□□□ -0.13
USP47-202ENST00000339865 LRGUKQ96M69 825 aa14.25□□□□□ -0.13
USP47-202ENST00000339865 NBPF3Q9H094 633 aa14.25□□□□□ -0.13
USP47-202ENST00000339865 VPS16Q9H269 839 aa14.25□□□□□ -0.13
USP47-202ENST00000339865 SLC12A5Q9H2X9 1139 aa14.25□□□□□ -0.13
USP47-202ENST00000339865 HNRNPCL2B2RXH8 293 aa14.25□□□□□ -0.13
USP47-202ENST00000339865 SPTLC2O15270 562 aa14.25□□□□□ -0.13
USP47-202ENST00000339865 HNRNPCL1O60812 293 aaKnown RBP14.25□□□□□ -0.13
USP47-202ENST00000339865 CCDC105Q8IYK2 499 aa14.25□□□□□ -0.13
USP47-202ENST00000339865 CTTNBP2NLQ9P2B4 639 aa14.25□□□□□ -0.13
USP47-202ENST00000339865 PCYT1AP49585 367 aa14.25□□□□□ -0.13
USP47-202ENST00000339865 USTQ9Y2C2 406 aa14.25□□□□□ -0.13
USP47-202ENST00000339865 TAF7Q15545 349 aaPredicted RBP14.25□□□□□ -0.13
USP47-202ENST00000339865 CEP19Q96LK0 163 aa14.25□□□□□ -0.13
USP47-202ENST00000339865 FNBP1Q96RU3 617 aa14.25□□□□□ -0.13
USP47-202ENST00000339865 VEZTQ9HBM0 779 aa14.25□□□□□ -0.13
USP47-202ENST00000339865 TRPA1O75762 1119 aa14.25□□□□□ -0.13
USP47-202ENST00000339865 TNFAIP3P21580 790 aa14.25□□□□□ -0.13
USP47-202ENST00000339865 PRAM1Q96QH2 718 aa14.25□□□□□ -0.13
USP47-202ENST00000339865 HARSP12081 509 aaKnown RBP14.24□□□□□ -0.13
USP47-202ENST00000339865 BEND3Q5T5X7 828 aa14.24□□□□□ -0.13
USP47-202ENST00000339865 ANKRD35Q8N283 1001 aa14.24□□□□□ -0.13
USP47-202ENST00000339865 KRT12Q99456 494 aa14.24□□□□□ -0.13
USP47-202ENST00000339865 NOC4LQ9BVI4 516 aaKnown RBP14.24□□□□□ -0.13
USP47-202ENST00000339865 ANKRD30BQ9BXX2 1392 aa14.24□□□□□ -0.13
USP47-202ENST00000339865 RSBN1LQ6PCB5 846 aaPredicted RBP14.24□□□□□ -0.13
USP47-202ENST00000339865 CYP26C1Q6V0L0 522 aa14.24□□□□□ -0.13
USP47-202ENST00000339865 Q6ZUG5 572 aa14.24□□□□□ -0.13
USP47-202ENST00000339865 TCEANC2Q96MN5 208 aa14.24□□□□□ -0.13
USP47-202ENST00000339865 CAPN15O75808 1086 aa14.24□□□□□ -0.13
USP47-202ENST00000339865 RFC4P35249 363 aa14.24□□□□□ -0.13
USP47-202ENST00000339865 BIRC3Q13489 604 aa14.24□□□□□ -0.13
USP47-202ENST00000339865 POLA1P09884 1462 aaPredicted RBP14.24□□□□□ -0.13
USP47-202ENST00000339865 TMPOP42166 694 aaKnown RBP14.24□□□□□ -0.13
USP47-202ENST00000339865 CWF19L2Q2TBE0 894 aaKnown RBP14.24□□□□□ -0.13
USP47-202ENST00000339865 NBPF14Q5TI25 921 aa14.24□□□□□ -0.13
USP47-202ENST00000339865 IGSF22Q8N9C0 903 aa14.24□□□□□ -0.13
USP47-202ENST00000339865 GUCY2FP51841 1108 aa14.24□□□□□ -0.13
USP47-202ENST00000339865 NOX5Q96PH1 765 aa14.24□□□□□ -0.13
USP47-202ENST00000339865 DRC3Q9H069 523 aa14.24□□□□□ -0.13
USP47-202ENST00000339865 HELLSQ9NRZ9 838 aa14.24□□□□□ -0.13
USP47-202ENST00000339865 HS1BP3Q53T59 392 aa14.24□□□□□ -0.13
USP47-202ENST00000339865 CROCCP2Q86T23 111 aa14.24□□□□□ -0.13
USP47-202ENST00000339865 PAK2Q13177 524 aa14.23□□□□□ -0.13
USP47-202ENST00000339865 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.23□□□□□ -0.13
USP47-202ENST00000339865 MPRIPQ6WCQ1 1025 aa14.23□□□□□ -0.13
USP47-202ENST00000339865 NRBF2Q96F24 287 aa14.23□□□□□ -0.13
USP47-202ENST00000339865 TRAF5O00463 557 aa14.23□□□□□ -0.13
USP47-202ENST00000339865 SP4Q02446 784 aa14.23□□□□□ -0.13
USP47-202ENST00000339865 TMEM259Q4ZIN3 620 aa14.23□□□□□ -0.13
USP47-202ENST00000339865 CTAGE3PQ8IX95 158 aa14.23□□□□□ -0.13
USP47-202ENST00000339865 CCDC13Q8IYE1 715 aa14.23□□□□□ -0.13
USP47-202ENST00000339865 FNBP4Q8N3X1 1017 aaPredicted RBP14.23□□□□□ -0.13
USP47-202ENST00000339865 UBAP1LF5GYI3 381 aa14.23□□□□□ -0.13
USP47-202ENST00000339865 NKTRP30414 1462 aaKnown RBP14.23□□□□□ -0.13
USP47-202ENST00000339865 TRMT112Q9UI30 125 aaKnown RBP14.23□□□□□ -0.13
USP47-202ENST00000339865 TRIM75PA6NK02 468 aa14.23□□□□□ -0.13
USP47-202ENST00000339865 C20orf194Q5TEA3 1177 aa14.23□□□□□ -0.13
USP47-202ENST00000339865 CHMP6Q96FZ7 201 aa14.23□□□□□ -0.13
USP47-202ENST00000339865 SCYL1Q96KG9 808 aa14.23□□□□□ -0.13
USP47-202ENST00000339865 GNGT2O14610 69 aa14.23□□□□□ -0.13
USP47-202ENST00000339865 RAD51AP2Q09MP3 1159 aa14.23□□□□□ -0.13
USP47-202ENST00000339865 KIF22Q14807 665 aa14.23□□□□□ -0.13
USP47-202ENST00000339865 BRF1Q92994 677 aa14.23□□□□□ -0.13
USP47-202ENST00000339865 BZW2Q9Y6E2 419 aaKnown RBP14.23□□□□□ -0.13
USP47-202ENST00000339865 TBC1D8BQ0IIM8 1120 aa14.22□□□□□ -0.13
USP47-202ENST00000339865 CDK19Q9BWU1 502 aa14.22□□□□□ -0.13
USP47-202ENST00000339865 KRT2P35908 639 aa14.22□□□□□ -0.13
USP47-202ENST00000339865 PMS1P54277 932 aaKnown RBP14.22□□□□□ -0.13
USP47-202ENST00000339865 E2F5Q15329 346 aa14.22□□□□□ -0.13
USP47-202ENST00000339865 ASIC2Q16515 512 aa14.22□□□□□ -0.13
USP47-202ENST00000339865 THUMPD2Q9BTF0 503 aaKnown RBP14.22□□□□□ -0.13
USP47-202ENST00000339865 TTC4O95801 387 aa14.22□□□□□ -0.13
USP47-202ENST00000339865 NBPF6Q5VWK0 638 aa14.22□□□□□ -0.13
USP47-202ENST00000339865 KRT79Q5XKE5 535 aa14.22□□□□□ -0.13
USP47-202ENST00000339865 POMGNT1Q8WZA1 660 aa14.22□□□□□ -0.13
USP47-202ENST00000339865 RMDN2Q96LZ7 410 aa14.22□□□□□ -0.13
USP47-202ENST00000339865 NBPF4Q96M43 638 aa14.22□□□□□ -0.13
USP47-202ENST00000339865 GPHNQ9NQX3 736 aaPredicted RBP14.22□□□□□ -0.13
USP47-202ENST00000339865 MAPK8IP1Q9UQF2 711 aa14.22□□□□□ -0.13
USP47-202ENST00000339865 SPDYE16A6NNV3 312 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms