RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 MYH2Q9UKX2 1941 aa18.98■□□□□ 0.63
SCNN1A-202ENST00000338748 MAST2Q6P0Q8 1798 aa18.98■□□□□ 0.63
SCNN1A-202ENST00000338748 POLR3DP05423 398 aaPredicted RBP18.97■□□□□ 0.63
SCNN1A-202ENST00000338748 GRIK5Q16478 980 aa18.97■□□□□ 0.63
SCNN1A-202ENST00000338748 FAM43AQ8N2R8 423 aa18.97■□□□□ 0.63
SCNN1A-202ENST00000338748 BICD2Q8TD16 824 aa18.97■□□□□ 0.63
SCNN1A-202ENST00000338748 RPGRQ92834 1020 aaKnown RBP18.97■□□□□ 0.63
SCNN1A-202ENST00000338748 RCOR1Q9UKL0 485 aa18.97■□□□□ 0.63
SCNN1A-202ENST00000338748 XDHP47989 1333 aa18.97■□□□□ 0.63
SCNN1A-202ENST00000338748 PRDM1O75626 825 aa18.97■□□□□ 0.63
SCNN1A-202ENST00000338748 GPSM2P81274 684 aa18.97■□□□□ 0.63
SCNN1A-202ENST00000338748 PDLIM2Q96JY6 352 aa18.97■□□□□ 0.63
SCNN1A-202ENST00000338748 BRIP1Q9BX63 1249 aa18.97■□□□□ 0.63
SCNN1A-202ENST00000338748 CCDC69A6NI79 296 aa18.96■□□□□ 0.63
SCNN1A-202ENST00000338748 POLRMTO00411 1230 aaKnown RBP18.96■□□□□ 0.63
SCNN1A-202ENST00000338748 LETM1O95202 739 aaPredicted RBP18.96■□□□□ 0.63
SCNN1A-202ENST00000338748 CTR9Q6PD62 1173 aa18.96■□□□□ 0.63
SCNN1A-202ENST00000338748 ANP32BQ92688 251 aaKnown RBP18.96■□□□□ 0.63
SCNN1A-202ENST00000338748 ST5P78524 1137 aa18.96■□□□□ 0.63
SCNN1A-202ENST00000338748 KIF23Q02241 960 aaPredicted RBP18.96■□□□□ 0.63
SCNN1A-202ENST00000338748 ZNF827Q17R98 1081 aa18.96■□□□□ 0.63
SCNN1A-202ENST00000338748 ALG1Q9BT22 464 aa18.96■□□□□ 0.63
SCNN1A-202ENST00000338748 NUP62CLQ9H1M0 184 aa18.96■□□□□ 0.63
SCNN1A-202ENST00000338748 RNF41Q9H4P4 317 aaPredicted RBP18.96■□□□□ 0.63
SCNN1A-202ENST00000338748 CCDC88AQ3V6T2 1871 aa18.95■□□□□ 0.62
SCNN1A-202ENST00000338748 USP17L12C9JPN9 530 aa18.95■□□□□ 0.62
SCNN1A-202ENST00000338748 USP17L21D6R901 530 aa18.95■□□□□ 0.62
SCNN1A-202ENST00000338748 WTAPQ15007 396 aa18.95■□□□□ 0.62
SCNN1A-202ENST00000338748 LEMD3Q9Y2U8 911 aa18.95■□□□□ 0.62
SCNN1A-202ENST00000338748 CKAP2LQ8IYA6 745 aa18.94■□□□□ 0.62
SCNN1A-202ENST00000338748 CMTR1Q8N1G2 835 aaKnown RBP18.94■□□□□ 0.62
SCNN1A-202ENST00000338748 GOLPH3LQ9H4A5 285 aa18.94■□□□□ 0.62
SCNN1A-202ENST00000338748 DCP1AQ9NPI6 582 aaPredicted RBP18.94■□□□□ 0.62
SCNN1A-202ENST00000338748 NID2Q14112 1375 aa18.94■□□□□ 0.62
SCNN1A-202ENST00000338748 TNKSO95271 1327 aa18.94■□□□□ 0.62
SCNN1A-202ENST00000338748 CYP2D6P10635 497 aa18.94■□□□□ 0.62
SCNN1A-202ENST00000338748 SEC23AQ15436 765 aa18.94■□□□□ 0.62
SCNN1A-202ENST00000338748 TDRD7Q8NHU6 1098 aaKnown RBP18.94■□□□□ 0.62
SCNN1A-202ENST00000338748 CLIC4Q9Y696 253 aa18.94■□□□□ 0.62
SCNN1A-202ENST00000338748 CDKL5O76039 1030 aa18.93■□□□□ 0.62
SCNN1A-202ENST00000338748 GUCY1A2P33402 732 aa18.93■□□□□ 0.62
SCNN1A-202ENST00000338748 SLC4A8Q2Y0W8 1093 aa18.93■□□□□ 0.62
SCNN1A-202ENST00000338748 TRIM44Q96DX7 344 aaPredicted RBP18.93■□□□□ 0.62
SCNN1A-202ENST00000338748 ZNF396Q96N95 335 aaPredicted RBP18.93■□□□□ 0.62
SCNN1A-202ENST00000338748 KIAA1551Q9HCM1 1747 aa18.93■□□□□ 0.62
SCNN1A-202ENST00000338748 UFL1O94874 794 aa18.93■□□□□ 0.62
SCNN1A-202ENST00000338748 IARSP41252 1262 aaKnown RBP18.93■□□□□ 0.62
SCNN1A-202ENST00000338748 SART3Q15020 963 aaKnown RBP18.93■□□□□ 0.62
SCNN1A-202ENST00000338748 DIXDC1Q155Q3 683 aa18.93■□□□□ 0.62
SCNN1A-202ENST00000338748 MYSM1Q5VVJ2 828 aa18.93■□□□□ 0.62
SCNN1A-202ENST00000338748 KRT40Q6A162 431 aa18.93■□□□□ 0.62
SCNN1A-202ENST00000338748 DZIP1Q86YF9 867 aaKnown RBP18.93■□□□□ 0.62
SCNN1A-202ENST00000338748 UBAC1Q9BSL1 405 aa18.93■□□□□ 0.62
SCNN1A-202ENST00000338748 SLC26A6Q9BXS9 759 aa18.93■□□□□ 0.62
SCNN1A-202ENST00000338748 CLSTN2Q9H4D0 955 aa18.93■□□□□ 0.62
SCNN1A-202ENST00000338748 MAP3K11Q16584 847 aa18.92■□□□□ 0.62
SCNN1A-202ENST00000338748 ZNF654Q8IZM8 581 aa18.92■□□□□ 0.62
SCNN1A-202ENST00000338748 CCDC82Q8N4S0 544 aa18.92■□□□□ 0.62
SCNN1A-202ENST00000338748 ENAHQ8N8S7 591 aaPredicted RBP18.92■□□□□ 0.62
SCNN1A-202ENST00000338748 ESR2Q92731 530 aa18.92■□□□□ 0.62
SCNN1A-202ENST00000338748 TNMDQ9H2S6 317 aa18.92■□□□□ 0.62
SCNN1A-202ENST00000338748 LAMB1P07942 1786 aa18.92■□□□□ 0.62
SCNN1A-202ENST00000338748 ATL3Q6DD88 541 aa18.92■□□□□ 0.62
SCNN1A-202ENST00000338748 DDX19AQ9NUU7 478 aaKnown RBP18.92■□□□□ 0.62
SCNN1A-202ENST00000338748 RTEL1Q9NZ71 1219 aa18.92■□□□□ 0.62
SCNN1A-202ENST00000338748 ANKRD31Q8N7Z5 1873 aa18.91■□□□□ 0.62
SCNN1A-202ENST00000338748 ERICH2A1L162 156 aa18.91■□□□□ 0.62
SCNN1A-202ENST00000338748 RTN1Q16799 776 aa18.91■□□□□ 0.62
SCNN1A-202ENST00000338748 CPLX2Q6PUV4 134 aaKnown RBP18.91■□□□□ 0.62
SCNN1A-202ENST00000338748 RBM43Q6ZSC3 357 aaKnown RBP18.91■□□□□ 0.62
SCNN1A-202ENST00000338748 NUP133Q8WUM0 1156 aa18.91■□□□□ 0.62
SCNN1A-202ENST00000338748 CRNKL1Q9BZJ0 848 aaKnown RBP18.91■□□□□ 0.62
SCNN1A-202ENST00000338748 FGRP09769 529 aa18.9■□□□□ 0.62
SCNN1A-202ENST00000338748 IFNAR1P17181 557 aa18.9■□□□□ 0.62
SCNN1A-202ENST00000338748 ME1P48163 572 aa18.9■□□□□ 0.62
SCNN1A-202ENST00000338748 BRAPQ7Z569 592 aa18.9■□□□□ 0.62
SCNN1A-202ENST00000338748 CCAR1Q8IX12 1150 aaKnown RBP18.9■□□□□ 0.62
SCNN1A-202ENST00000338748 LINC00301Q8NCQ3 95 aa18.9■□□□□ 0.62
SCNN1A-202ENST00000338748 RBM17Q96I25 401 aaKnown RBP18.9■□□□□ 0.62
SCNN1A-202ENST00000338748 POLLQ9UGP5 575 aa18.9■□□□□ 0.62
SCNN1A-202ENST00000338748 PCDHA7Q9UN72 937 aa18.9■□□□□ 0.62
SCNN1A-202ENST00000338748 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.9■□□□□ 0.62
SCNN1A-202ENST00000338748 ZBTB22O15209 634 aa18.9■□□□□ 0.62
SCNN1A-202ENST00000338748 FMNL1O95466 1100 aaPredicted RBP18.9■□□□□ 0.62
SCNN1A-202ENST00000338748 LDHBP07195 334 aaKnown RBP18.9■□□□□ 0.62
SCNN1A-202ENST00000338748 SNW1Q13573 536 aaKnown RBP18.9■□□□□ 0.62
SCNN1A-202ENST00000338748 SYNE3Q6ZMZ3 975 aa18.9■□□□□ 0.62
SCNN1A-202ENST00000338748 ZNF804AQ7Z570 1209 aa18.9■□□□□ 0.62
SCNN1A-202ENST00000338748 NBPF11Q86T75 865 aa18.9■□□□□ 0.62
SCNN1A-202ENST00000338748 USP25Q9UHP3 1055 aa18.9■□□□□ 0.62
SCNN1A-202ENST00000338748 NMT2O60551 498 aa18.89■□□□□ 0.61
SCNN1A-202ENST00000338748 USP17L8P0C7I0 530 aa18.89■□□□□ 0.61
SCNN1A-202ENST00000338748 HOXA10P31260 410 aaPredicted RBP18.89■□□□□ 0.61
SCNN1A-202ENST00000338748 TYRO3Q06418 890 aa18.89■□□□□ 0.61
SCNN1A-202ENST00000338748 C15orf52Q6ZUT6 534 aaKnown RBP18.89■□□□□ 0.61
SCNN1A-202ENST00000338748 WDR66Q8TBY9 1149 aa18.89■□□□□ 0.61
SCNN1A-202ENST00000338748 ZSCAN10Q96SZ4 725 aaPredicted RBP18.89■□□□□ 0.61
SCNN1A-202ENST00000338748 MTA3Q9BTC8 594 aa18.89■□□□□ 0.61
SCNN1A-202ENST00000338748 MRVI1Q9Y6F6 885 aa18.89■□□□□ 0.61
SCNN1A-202ENST00000338748 STK36Q9NRP7 1315 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms