RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 DDRGK1Q96HY6 314 aa18.45■□□□□ 0.54
SEC13-201ENST00000337354 FAM227BQ96M60 508 aa18.45■□□□□ 0.54
SEC13-201ENST00000337354 SEC62Q99442 399 aaKnown RBP18.45■□□□□ 0.54
SEC13-201ENST00000337354 TMEM39BQ9GZU3 492 aa18.45■□□□□ 0.54
SEC13-201ENST00000337354 OSBPL5Q9H0X9 879 aaPredicted RBP18.45■□□□□ 0.54
SEC13-201ENST00000337354 ZNF408Q9H9D4 720 aa18.45■□□□□ 0.54
SEC13-201ENST00000337354 DDX4Q9NQI0 724 aaKnown RBP18.45■□□□□ 0.54
SEC13-201ENST00000337354 CREBZFQ9NS37 354 aa18.45■□□□□ 0.54
SEC13-201ENST00000337354 SCAF8Q9UPN6 1271 aaKnown RBP18.45■□□□□ 0.54
SEC13-201ENST00000337354 SLC4A4Q9Y6R1 1079 aa18.45■□□□□ 0.54
SEC13-201ENST00000337354 TMEM88BA6NKF7 163 aa18.44■□□□□ 0.54
SEC13-201ENST00000337354 M0R2C6 588 aa18.44■□□□□ 0.54
SEC13-201ENST00000337354 CHMLP26374 656 aa18.44■□□□□ 0.54
SEC13-201ENST00000337354 CWC27Q6UX04 472 aaKnown RBP18.44■□□□□ 0.54
SEC13-201ENST00000337354 MAPKAPK5Q8IW41 473 aa18.44■□□□□ 0.54
SEC13-201ENST00000337354 TEPSINQ96N21 525 aa18.44■□□□□ 0.54
SEC13-201ENST00000337354 RPAP1Q9BWH6 1393 aaPredicted RBP18.44■□□□□ 0.54
SEC13-201ENST00000337354 MKRN1Q9UHC7 482 aaKnown RBP18.44■□□□□ 0.54
SEC13-201ENST00000337354 DOCK2Q92608 1830 aa18.44■□□□□ 0.54
SEC13-201ENST00000337354 FLT1P17948 1338 aa18.43■□□□□ 0.54
SEC13-201ENST00000337354 A0A0D9SFI3 127 aa18.43■□□□□ 0.54
SEC13-201ENST00000337354 PATL2C9JE40 543 aaKnown RBP18.43■□□□□ 0.54
SEC13-201ENST00000337354 ZSCAN29Q8IWY8 852 aaPredicted RBP18.43■□□□□ 0.54
SEC13-201ENST00000337354 PRKAB2O43741 272 aa18.42■□□□□ 0.54
SEC13-201ENST00000337354 FKBP1BP68106 108 aa18.42■□□□□ 0.54
SEC13-201ENST00000337354 NBPF12Q5TAG4 269 aaPredicted RBP18.42■□□□□ 0.54
SEC13-201ENST00000337354 PRAMEF18Q5VWM3 479 aa18.42■□□□□ 0.54
SEC13-201ENST00000337354 CASC1Q6TDU7 716 aa18.42■□□□□ 0.54
SEC13-201ENST00000337354 ZFPM1Q8IX07 1006 aa18.42■□□□□ 0.54
SEC13-201ENST00000337354 SDR42E1Q8WUS8 393 aa18.42■□□□□ 0.54
SEC13-201ENST00000337354 NACAP1Q9BZK3 213 aa18.42■□□□□ 0.54
SEC13-201ENST00000337354 DCP1AQ9NPI6 582 aaPredicted RBP18.42■□□□□ 0.54
SEC13-201ENST00000337354 PI4KBQ9UBF8 816 aa18.42■□□□□ 0.54
SEC13-201ENST00000337354 MAST2Q6P0Q8 1798 aa18.42■□□□□ 0.54
SEC13-201ENST00000337354 ATRNL1Q5VV63 1379 aa18.42■□□□□ 0.54
SEC13-201ENST00000337354 RAD50Q92878 1312 aa18.42■□□□□ 0.54
SEC13-201ENST00000337354 PPP1R12BO60237 982 aaPredicted RBP18.42■□□□□ 0.54
SEC13-201ENST00000337354 DLK2Q6UY11 383 aa18.42■□□□□ 0.54
SEC13-201ENST00000337354 TTC6Q86TZ1 520 aa18.42■□□□□ 0.54
SEC13-201ENST00000337354 FOXP4Q8IVH2 680 aaPredicted RBP18.42■□□□□ 0.54
SEC13-201ENST00000337354 TAOK2Q9UL54 1235 aa18.42■□□□□ 0.54
SEC13-201ENST00000337354 ABT1Q9ULW3 272 aaKnown RBP18.42■□□□□ 0.54
SEC13-201ENST00000337354 COL2A1P02458 1487 aaPredicted RBP18.41■□□□□ 0.54
SEC13-201ENST00000337354 CEP350Q5VT06 3117 aa18.41■□□□□ 0.54
SEC13-201ENST00000337354 DDTLA6NHG4 134 aaPredicted RBP18.41■□□□□ 0.54
SEC13-201ENST00000337354 GSG1L2A8MUP6 293 aa18.41■□□□□ 0.54
SEC13-201ENST00000337354 CDC45O75419 566 aa18.41■□□□□ 0.54
SEC13-201ENST00000337354 CELF2O95319 508 aaKnown RBP18.41■□□□□ 0.54
SEC13-201ENST00000337354 APPP05067 770 aa18.41■□□□□ 0.54
SEC13-201ENST00000337354 DCAF15Q66K64 600 aa18.41■□□□□ 0.54
SEC13-201ENST00000337354 SH3BP5LQ7L8J4 393 aa18.41■□□□□ 0.54
SEC13-201ENST00000337354 AMOTL1Q8IY63 956 aa18.41■□□□□ 0.54
SEC13-201ENST00000337354 KLRG1Q96E93 195 aa18.41■□□□□ 0.54
SEC13-201ENST00000337354 CSRNP1Q96S65 589 aa18.41■□□□□ 0.54
SEC13-201ENST00000337354 MCM9Q9NXL9 1143 aa18.41■□□□□ 0.54
SEC13-201ENST00000337354 MYH2Q9UKX2 1941 aa18.4■□□□□ 0.54
SEC13-201ENST00000337354 CCDC171Q6TFL3 1326 aa18.4■□□□□ 0.54
SEC13-201ENST00000337354 TBC1D12O60347 775 aa18.4■□□□□ 0.54
SEC13-201ENST00000337354 HLA-DOAP06340 250 aa18.4■□□□□ 0.54
SEC13-201ENST00000337354 MAP3K10Q02779 954 aa18.4■□□□□ 0.54
SEC13-201ENST00000337354 CST9Q5W186 159 aa18.4■□□□□ 0.54
SEC13-201ENST00000337354 IFNL3Q8IZI9 196 aa18.4■□□□□ 0.54
SEC13-201ENST00000337354 C2orf69Q8N8R5 385 aa18.4■□□□□ 0.54
SEC13-201ENST00000337354 PALD1Q9ULE6 856 aa18.4■□□□□ 0.54
SEC13-201ENST00000337354 UNCXA6NJT0 531 aa18.39■□□□□ 0.53
SEC13-201ENST00000337354 POLR3DP05423 398 aaPredicted RBP18.39■□□□□ 0.53
SEC13-201ENST00000337354 CCDC129Q6ZRS4 1044 aa18.39■□□□□ 0.53
SEC13-201ENST00000337354 PAXIP1Q6ZW49 1069 aaPredicted RBP18.39■□□□□ 0.53
SEC13-201ENST00000337354 ARMC9Q7Z3E5 817 aa18.39■□□□□ 0.53
SEC13-201ENST00000337354 ZNF589Q86UQ0 364 aaPredicted RBP18.39■□□□□ 0.53
SEC13-201ENST00000337354 GBA2Q9HCG7 927 aaPredicted RBP18.39■□□□□ 0.53
SEC13-201ENST00000337354 ARPP21Q9UBL0 812 aaPredicted RBP18.39■□□□□ 0.53
SEC13-201ENST00000337354 SGSM2O43147 1006 aa18.38■□□□□ 0.53
SEC13-201ENST00000337354 HSPD1P10809 573 aaKnown RBP18.38■□□□□ 0.53
SEC13-201ENST00000337354 ALX1Q15699 326 aa18.38■□□□□ 0.53
SEC13-201ENST00000337354 MAP3K11Q16584 847 aa18.38■□□□□ 0.53
SEC13-201ENST00000337354 SBK1Q52WX2 424 aa18.38■□□□□ 0.53
SEC13-201ENST00000337354 METTL16Q86W50 562 aaKnown RBP18.38■□□□□ 0.53
SEC13-201ENST00000337354 CDAN1Q8IWY9 1227 aa18.38■□□□□ 0.53
SEC13-201ENST00000337354 EHD4Q9H223 541 aa18.38■□□□□ 0.53
SEC13-201ENST00000337354 SAP30BPQ9UHR5 308 aaKnown RBP18.38■□□□□ 0.53
SEC13-201ENST00000337354 HERC5Q9UII4 1024 aaKnown RBP18.38■□□□□ 0.53
SEC13-201ENST00000337354 USP17L12C9JPN9 530 aa18.37■□□□□ 0.53
SEC13-201ENST00000337354 USP17L21D6R901 530 aa18.37■□□□□ 0.53
SEC13-201ENST00000337354 TDO2P48775 406 aa18.37■□□□□ 0.53
SEC13-201ENST00000337354 DNAJC5GQ8N7S2 189 aa18.37■□□□□ 0.53
SEC13-201ENST00000337354 PAPPA2Q9BXP8 1791 aa18.36■□□□□ 0.53
SEC13-201ENST00000337354 USP2O75604 605 aaPredicted RBP18.36■□□□□ 0.53
SEC13-201ENST00000337354 IREB2P48200 963 aaKnown RBP18.36■□□□□ 0.53
SEC13-201ENST00000337354 TTLL12Q14166 644 aaPredicted RBP18.36■□□□□ 0.53
SEC13-201ENST00000337354 C12orf60Q5U649 245 aa18.36■□□□□ 0.53
SEC13-201ENST00000337354 CTR9Q6PD62 1173 aa18.36■□□□□ 0.53
SEC13-201ENST00000337354 ESYT1Q9BSJ8 1104 aa18.36■□□□□ 0.53
SEC13-201ENST00000337354 DSCC1Q9BVC3 393 aa18.36■□□□□ 0.53
SEC13-201ENST00000337354 ZNF341Q9BYN7 854 aa18.36■□□□□ 0.53
SEC13-201ENST00000337354 NAPBQ9H115 298 aa18.36■□□□□ 0.53
SEC13-201ENST00000337354 SERPINB13Q9UIV8 391 aa18.36■□□□□ 0.53
SEC13-201ENST00000337354 PLCD1P51178 756 aa18.35■□□□□ 0.53
SEC13-201ENST00000337354 VPS53Q5VIR6 699 aa18.35■□□□□ 0.53
SEC13-201ENST00000337354 KIAA1211Q6ZU35 1233 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms