RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 CTNNA3Q9UI47 895 aa25.65■■□□□ 1.7
TPM1-204ENST00000334895 LAMB1P07942 1786 aa25.64■■□□□ 1.7
TPM1-204ENST00000334895 TBC1D10BQ4KMP7 808 aaPredicted RBP25.64■■□□□ 1.7
TPM1-204ENST00000334895 RBM26Q5T8P6 1007 aaKnown RBP25.64■■□□□ 1.7
TPM1-204ENST00000334895 L3MBTL3Q96JM7 780 aaPredicted RBP25.64■■□□□ 1.7
TPM1-204ENST00000334895 NBPF3Q9H094 633 aa25.64■■□□□ 1.7
TPM1-204ENST00000334895 SNX14Q9Y5W7 946 aa25.64■■□□□ 1.7
TPM1-204ENST00000334895 H7C1D1 291 aa25.63■■□□□ 1.69
TPM1-204ENST00000334895 SMIM22K7EJ46 135 aa25.63■■□□□ 1.69
TPM1-204ENST00000334895 HAND2P61296 217 aa25.63■■□□□ 1.69
TPM1-204ENST00000334895 EVX2Q03828 476 aa25.63■■□□□ 1.69
TPM1-204ENST00000334895 SPDYE2Q495Y8 402 aa25.63■■□□□ 1.69
TPM1-204ENST00000334895 CTR9Q6PD62 1173 aa25.63■■□□□ 1.69
TPM1-204ENST00000334895 TRPM4Q8TD43 1214 aa25.63■■□□□ 1.69
TPM1-204ENST00000334895 IDI2Q9BXS1 227 aa25.63■■□□□ 1.69
TPM1-204ENST00000334895 RRAGCQ9HB90 399 aa25.63■■□□□ 1.69
TPM1-204ENST00000334895 ZNF70Q9UC06 446 aaPredicted RBP25.63■■□□□ 1.69
TPM1-204ENST00000334895 MYH1P12882 1939 aa25.63■■□□□ 1.69
TPM1-204ENST00000334895 CYP2D7A0A087X1C5 515 aa25.63■■□□□ 1.69
TPM1-204ENST00000334895 CLRN2A0PK11 232 aa25.63■■□□□ 1.69
TPM1-204ENST00000334895 PICALMQ13492 652 aa25.63■■□□□ 1.69
TPM1-204ENST00000334895 KIF4BQ2VIQ3 1234 aa25.63■■□□□ 1.69
TPM1-204ENST00000334895 IL17RAQ96F46 866 aa25.63■■□□□ 1.69
TPM1-204ENST00000334895 FAM198AQ9UFP1 575 aa25.63■■□□□ 1.69
TPM1-204ENST00000334895 POTECB2RU33 542 aa25.62■■□□□ 1.69
TPM1-204ENST00000334895 USP17L12C9JPN9 530 aa25.62■■□□□ 1.69
TPM1-204ENST00000334895 USP17L21D6R901 530 aa25.62■■□□□ 1.69
TPM1-204ENST00000334895 MCM9Q9NXL9 1143 aa25.62■■□□□ 1.69
TPM1-204ENST00000334895 ASTN2O75129 1339 aaPredicted RBP25.61■■□□□ 1.69
TPM1-204ENST00000334895 CYP2D6P10635 497 aa25.61■■□□□ 1.69
TPM1-204ENST00000334895 ANAPC15P60006 121 aa25.61■■□□□ 1.69
TPM1-204ENST00000334895 IMMTQ16891 758 aaKnown RBP25.61■■□□□ 1.69
TPM1-204ENST00000334895 ZFPM1Q8IX07 1006 aa25.61■■□□□ 1.69
TPM1-204ENST00000334895 TSGA10IPQ3SY00 556 aa25.6■■□□□ 1.69
TPM1-204ENST00000334895 SBK1Q52WX2 424 aa25.6■■□□□ 1.69
TPM1-204ENST00000334895 RNF20Q5VTR2 975 aa25.6■■□□□ 1.69
TPM1-204ENST00000334895 STOX1Q6ZVD7 989 aa25.6■■□□□ 1.69
TPM1-204ENST00000334895 SAP30BPQ9UHR5 308 aaKnown RBP25.6■■□□□ 1.69
TPM1-204ENST00000334895 NPM3O75607 178 aaKnown RBP25.59■■□□□ 1.69
TPM1-204ENST00000334895 HIRAP54198 1017 aaPredicted RBP25.59■■□□□ 1.69
TPM1-204ENST00000334895 ADCK5Q3MIX3 580 aa25.59■■□□□ 1.69
TPM1-204ENST00000334895 TBC1D10CQ8IV04 446 aa25.59■■□□□ 1.69
TPM1-204ENST00000334895 DDRGK1Q96HY6 314 aa25.59■■□□□ 1.69
TPM1-204ENST00000334895 OSBPL5Q9H0X9 879 aaPredicted RBP25.59■■□□□ 1.69
TPM1-204ENST00000334895 ARPP21Q9UBL0 812 aaPredicted RBP25.59■■□□□ 1.69
TPM1-204ENST00000334895 TACC3Q9Y6A5 838 aa25.59■■□□□ 1.69
TPM1-204ENST00000334895 ZNF213O14771 459 aa25.59■■□□□ 1.69
TPM1-204ENST00000334895 LMOD1P29536 600 aaPredicted RBP25.59■■□□□ 1.69
TPM1-204ENST00000334895 PPARAQ07869 468 aa25.59■■□□□ 1.69
TPM1-204ENST00000334895 COL9A3Q14050 684 aaPredicted RBP25.59■■□□□ 1.69
TPM1-204ENST00000334895 SLC4A8Q2Y0W8 1093 aa25.59■■□□□ 1.69
TPM1-204ENST00000334895 MINDY4BA8MYZ0 360 aa25.58■■□□□ 1.69
TPM1-204ENST00000334895 ZKSCAN1P17029 563 aaPredicted RBP25.58■■□□□ 1.69
TPM1-204ENST00000334895 CTDSPL2Q05D32 466 aa25.58■■□□□ 1.69
TPM1-204ENST00000334895 C12orf60Q5U649 245 aa25.58■■□□□ 1.69
TPM1-204ENST00000334895 ANAPC4Q9UJX5 808 aa25.58■■□□□ 1.69
TPM1-204ENST00000334895 CNTNAP1P78357 1384 aa25.57■■□□□ 1.68
TPM1-204ENST00000334895 KIF3CO14782 793 aa25.57■■□□□ 1.68
TPM1-204ENST00000334895 MYO1BO43795 1136 aa25.57■■□□□ 1.68
TPM1-204ENST00000334895 VEGFAP15692 232 aaPredicted RBP25.57■■□□□ 1.68
TPM1-204ENST00000334895 TCP10Q12799 353 aa25.57■■□□□ 1.68
TPM1-204ENST00000334895 VEZTQ9HBM0 779 aa25.57■■□□□ 1.68
TPM1-204ENST00000334895 ADARB2Q9NS39 739 aaKnown RBP25.57■■□□□ 1.68
TPM1-204ENST00000334895 TMOD2Q9NZR1 351 aa25.57■■□□□ 1.68
TPM1-204ENST00000334895 SIPA1L1O43166 1804 aa25.57■■□□□ 1.68
TPM1-204ENST00000334895 TCP10L2B9ZVM9 353 aa25.56■■□□□ 1.68
TPM1-204ENST00000334895 PLCD1P51178 756 aa25.56■■□□□ 1.68
TPM1-204ENST00000334895 FKBP1CQ5VVH2 108 aa25.56■■□□□ 1.68
TPM1-204ENST00000334895 E7EWF7 191 aa25.55■■□□□ 1.68
TPM1-204ENST00000334895 ENTPD3O75355 529 aa25.55■■□□□ 1.68
TPM1-204ENST00000334895 SH3BP5LQ7L8J4 393 aa25.55■■□□□ 1.68
TPM1-204ENST00000334895 INCENPQ9NQS7 918 aa25.55■■□□□ 1.68
TPM1-204ENST00000334895 HACL1Q9UJ83 578 aa25.55■■□□□ 1.68
TPM1-204ENST00000334895 IQCA1LA6NCM1 817 aa25.55■■□□□ 1.68
TPM1-204ENST00000334895 ROBO3Q96MS0 1386 aa25.54■■□□□ 1.68
TPM1-204ENST00000334895 COL2A1P02458 1487 aaPredicted RBP25.54■■□□□ 1.68
TPM1-204ENST00000334895 POLR3DP05423 398 aaPredicted RBP25.54■■□□□ 1.68
TPM1-204ENST00000334895 NKX2-3Q8TAU0 364 aa25.54■■□□□ 1.68
TPM1-204ENST00000334895 SCAF8Q9UPN6 1271 aaKnown RBP25.54■■□□□ 1.68
TPM1-204ENST00000334895 RBM19Q9Y4C8 960 aaKnown RBP25.54■■□□□ 1.68
TPM1-204ENST00000334895 ATRNL1Q5VV63 1379 aa25.54■■□□□ 1.68
TPM1-204ENST00000334895 DDTLA6NHG4 134 aaPredicted RBP25.53■■□□□ 1.68
TPM1-204ENST00000334895 STK11IPQ8N1F8 1099 aa25.53■■□□□ 1.68
TPM1-204ENST00000334895 JAKMIP1Q96N16 626 aaKnown RBP25.53■■□□□ 1.68
TPM1-204ENST00000334895 TAF1DQ9H5J8 278 aaPredicted RBP25.53■■□□□ 1.68
TPM1-204ENST00000334895 NEDD4P46934 1319 aa25.53■■□□□ 1.68
TPM1-204ENST00000334895 EPHX2P34913 555 aa25.52■■□□□ 1.68
TPM1-204ENST00000334895 KRT32Q14532 448 aa25.52■■□□□ 1.68
TPM1-204ENST00000334895 AKNAD1Q5T1N1 836 aa25.52■■□□□ 1.68
TPM1-204ENST00000334895 STAG1Q8WVM7 1258 aa25.52■■□□□ 1.68
TPM1-204ENST00000334895 DYNLL2Q96FJ2 89 aa25.52■■□□□ 1.68
TPM1-204ENST00000334895 POLR2AP24928 1970 aaKnown RBP25.52■■□□□ 1.68
TPM1-204ENST00000334895 ANGEL2Q5VTE6 544 aaKnown RBP25.52■■□□□ 1.68
TPM1-204ENST00000334895 FAM83AQ86UY5 434 aa25.52■■□□□ 1.68
TPM1-204ENST00000334895 FAM151AQ8WW52 585 aa25.52■■□□□ 1.68
TPM1-204ENST00000334895 TM6SF1Q9BZW5 370 aa25.52■■□□□ 1.68
TPM1-204ENST00000334895 FGRP09769 529 aa25.51■■□□□ 1.67
TPM1-204ENST00000334895 CPA1P15085 419 aa25.51■■□□□ 1.67
TPM1-204ENST00000334895 CDAN1Q8IWY9 1227 aa25.51■■□□□ 1.67
TPM1-204ENST00000334895 AMOTL1Q8IY63 956 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms