RNA–Protein interactions for RNA: ENST00000334464.6

PDZD8-201, Transcript of PDZ domain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD8, Length 9,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-201ENST00000334464 BIRC3Q13489 604 aa18.57■□□□□ 0.56
PDZD8-201ENST00000334464 CREB3L3Q68CJ9 461 aa18.57■□□□□ 0.56
PDZD8-201ENST00000334464 PFDN4Q9NQP4 134 aa18.57■□□□□ 0.56
PDZD8-201ENST00000334464 KCNK9Q9NPC2 374 aa18.57■□□□□ 0.56
PDZD8-201ENST00000334464 RNF216Q9NWF9 866 aaPredicted RBP18.57■□□□□ 0.56
PDZD8-201ENST00000334464 TSNAXIP1Q2TAA8 658 aa18.57■□□□□ 0.56
PDZD8-201ENST00000334464 CETN3O15182 167 aa18.57■□□□□ 0.56
PDZD8-201ENST00000334464 P4HA1P13674 534 aa18.57■□□□□ 0.56
PDZD8-201ENST00000334464 IFT81Q8WYA0 676 aa18.57■□□□□ 0.56
PDZD8-201ENST00000334464 EPSTI1Q96J88 318 aa18.57■□□□□ 0.56
PDZD8-201ENST00000334464 CAPZA3Q96KX2 299 aa18.57■□□□□ 0.56
PDZD8-201ENST00000334464 YTHDC2Q9H6S0 1430 aaKnown RBP18.57■□□□□ 0.56
PDZD8-201ENST00000334464 DNMT1P26358 1616 aaKnown RBP18.56■□□□□ 0.56
PDZD8-201ENST00000334464 NECAB1Q8N987 351 aa18.56■□□□□ 0.56
PDZD8-201ENST00000334464 KRT5P13647 590 aa18.56■□□□□ 0.56
PDZD8-201ENST00000334464 MTMR3Q13615 1198 aa18.56■□□□□ 0.56
PDZD8-201ENST00000334464 HACE1Q8IYU2 909 aa18.56■□□□□ 0.56
PDZD8-201ENST00000334464 ABCC10Q5T3U5 1492 aa18.56■□□□□ 0.56
PDZD8-201ENST00000334464 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.56■□□□□ 0.562e-6■■■■■ 29.8
PDZD8-201ENST00000334464 LEO1Q8WVC0 666 aaPredicted RBP18.56■□□□□ 0.56
PDZD8-201ENST00000334464 IMPACTQ9P2X3 320 aa18.56■□□□□ 0.56
PDZD8-201ENST00000334464 GPATCH8Q9UKJ3 1502 aaKnown RBP18.56■□□□□ 0.56
PDZD8-201ENST00000334464 ATP2C2O75185 946 aa18.56■□□□□ 0.56
PDZD8-201ENST00000334464 PHLDB2Q86SQ0 1253 aa18.56■□□□□ 0.56
PDZD8-201ENST00000334464 NOC2LQ9Y3T9 749 aaKnown RBP18.56■□□□□ 0.56
PDZD8-201ENST00000334464 ZKSCAN3Q9BRR0 538 aa18.56■□□□□ 0.56
PDZD8-201ENST00000334464 ZEB2O60315 1214 aa18.56■□□□□ 0.56
PDZD8-201ENST00000334464 PARP10Q53GL7 1025 aa18.56■□□□□ 0.56
PDZD8-201ENST00000334464 LMBR1LQ6UX01 489 aa18.56■□□□□ 0.56
PDZD8-201ENST00000334464 TRAF5O00463 557 aa18.56■□□□□ 0.56
PDZD8-201ENST00000334464 PUM3Q15397 648 aaKnown RBP18.56■□□□□ 0.56
PDZD8-201ENST00000334464 DPH6Q7L8W6 267 aa18.56■□□□□ 0.56
PDZD8-201ENST00000334464 CEP57Q86XR8 500 aa18.56■□□□□ 0.56
PDZD8-201ENST00000334464 NSMCE1Q8WV22 266 aa18.56■□□□□ 0.56
PDZD8-201ENST00000334464 NAPGQ99747 312 aaPredicted RBP18.56■□□□□ 0.56
PDZD8-201ENST00000334464 KIF11P52732 1056 aa18.55■□□□□ 0.56
PDZD8-201ENST00000334464 ZNF569Q5MCW4 686 aa18.55■□□□□ 0.56
PDZD8-201ENST00000334464 FAM212AQ96EL1 285 aa18.55■□□□□ 0.56
PDZD8-201ENST00000334464 BCRP11274 1271 aa18.55■□□□□ 0.56
PDZD8-201ENST00000334464 TSHZ3Q63HK5 1081 aa18.55■□□□□ 0.56
PDZD8-201ENST00000334464 DZIP3Q86Y13 1208 aaKnown RBP18.55■□□□□ 0.56
PDZD8-201ENST00000334464 SMC5Q8IY18 1101 aa18.55■□□□□ 0.56
PDZD8-201ENST00000334464 RAB3GAP1Q15042 981 aa18.55■□□□□ 0.56
PDZD8-201ENST00000334464 SLC4A8Q2Y0W8 1093 aa18.55■□□□□ 0.56
PDZD8-201ENST00000334464 CCDC84Q86UT8 332 aaPredicted RBP18.55■□□□□ 0.56
PDZD8-201ENST00000334464 GSDMBQ8TAX9 411 aa18.55■□□□□ 0.56
PDZD8-201ENST00000334464 NBPF14Q5TI25 921 aa18.55■□□□□ 0.56
PDZD8-201ENST00000334464 SIRT1Q96EB6 747 aa18.55■□□□□ 0.56
PDZD8-201ENST00000334464 MEIS3Q99687 375 aa18.55■□□□□ 0.56
PDZD8-201ENST00000334464 UHRF1BP1Q6BDS2 1440 aa18.55■□□□□ 0.56
PDZD8-201ENST00000334464 A0A1B0GUA9 196 aa18.55■□□□□ 0.56
PDZD8-201ENST00000334464 CASQ2O14958 399 aaPredicted RBP18.55■□□□□ 0.56
PDZD8-201ENST00000334464 NCAPGQ9BPX3 1015 aa18.55■□□□□ 0.56
PDZD8-201ENST00000334464 PNMA2Q9UL42 364 aa18.55■□□□□ 0.56
PDZD8-201ENST00000334464 TRERF1Q96PN7 1200 aa18.54■□□□□ 0.56
PDZD8-201ENST00000334464 HOXB7P09629 217 aa18.54■□□□□ 0.56
PDZD8-201ENST00000334464 LARP6Q9BRS8 491 aaKnown RBP18.54■□□□□ 0.56
PDZD8-201ENST00000334464 PTPDC1A2A3K4 754 aa18.54■□□□□ 0.56
PDZD8-201ENST00000334464 NEDD9Q14511 834 aa18.54■□□□□ 0.56
PDZD8-201ENST00000334464 MAP3K21Q5TCX8 1036 aa18.54■□□□□ 0.56
PDZD8-201ENST00000334464 C8orf74Q6P047 294 aa18.54■□□□□ 0.56
PDZD8-201ENST00000334464 MAIP1Q8WWC4 291 aa18.54■□□□□ 0.56
PDZD8-201ENST00000334464 RPGRIP1Q96KN7 1286 aa18.54■□□□□ 0.56
PDZD8-201ENST00000334464 VPS18Q9P253 973 aa18.54■□□□□ 0.56
PDZD8-201ENST00000334464 PARD3Q8TEW0 1356 aa18.54■□□□□ 0.56
PDZD8-201ENST00000334464 IWS1Q96ST2 819 aa18.54■□□□□ 0.56
PDZD8-201ENST00000334464 IFNKQ9P0W0 207 aa18.54■□□□□ 0.56
PDZD8-201ENST00000334464 SARNPP82979 210 aaKnown RBP18.54■□□□□ 0.56
PDZD8-201ENST00000334464 ZNF365Q70YC5 407 aa18.54■□□□□ 0.56
PDZD8-201ENST00000334464 CCT6AP40227 531 aaKnown RBP18.54■□□□□ 0.56
PDZD8-201ENST00000334464 ARHGAP25P42331 645 aa18.54■□□□□ 0.56
PDZD8-201ENST00000334464 TEKT1Q969V4 418 aa18.54■□□□□ 0.56
PDZD8-201ENST00000334464 HSPA1LP34931 641 aa18.54■□□□□ 0.56
PDZD8-201ENST00000334464 LMNTD2Q8IXW0 634 aa18.53■□□□□ 0.56
PDZD8-201ENST00000334464 AFAP1L1Q8TED9 768 aa18.53■□□□□ 0.56
PDZD8-201ENST00000334464 NOC4LQ9BVI4 516 aaKnown RBP18.53■□□□□ 0.56
PDZD8-201ENST00000334464 RASSF2P50749 326 aa18.53■□□□□ 0.56
PDZD8-201ENST00000334464 RAPGEF1Q13905 1077 aa18.53■□□□□ 0.56
PDZD8-201ENST00000334464 ANGEL1Q9UNK9 670 aaKnown RBP18.53■□□□□ 0.56
PDZD8-201ENST00000334464 PARP2Q9UGN5 583 aa18.53■□□□□ 0.56
PDZD8-201ENST00000334464 TACC3Q9Y6A5 838 aa18.53■□□□□ 0.56
PDZD8-201ENST00000334464 GNA14O95837 355 aa18.53■□□□□ 0.56
PDZD8-201ENST00000334464 IRX4P78413 519 aa18.53■□□□□ 0.56
PDZD8-201ENST00000334464 TRIM6Q9C030 488 aaPredicted RBP18.53■□□□□ 0.56
PDZD8-201ENST00000334464 LZTFL1Q9NQ48 299 aa18.53■□□□□ 0.56
PDZD8-201ENST00000334464 CCDC184Q52MB2 194 aa18.53■□□□□ 0.56
PDZD8-201ENST00000334464 MCTP2Q6DN12 878 aa18.53■□□□□ 0.56
PDZD8-201ENST00000334464 NOP56O00567 594 aaKnown RBP18.53■□□□□ 0.56
PDZD8-201ENST00000334464 LRRC2Q9BYS8 371 aa18.53■□□□□ 0.56
PDZD8-201ENST00000334464 DCTPP1Q9H773 170 aa18.52■□□□□ 0.56
PDZD8-201ENST00000334464 MRPL50Q8N5N7 158 aaKnown RBP18.52■□□□□ 0.56
PDZD8-201ENST00000334464 ZMYM4Q5VZL5 1548 aa18.52■□□□□ 0.56
PDZD8-201ENST00000334464 PPFIA1Q13136 1202 aa18.52■□□□□ 0.56
PDZD8-201ENST00000334464 SLC9C1Q4G0N8 1177 aa18.52■□□□□ 0.56
PDZD8-201ENST00000334464 GBP6Q6ZN66 633 aa18.52■□□□□ 0.56
PDZD8-201ENST00000334464 IRS4O14654 1257 aaPredicted RBP18.52■□□□□ 0.56
PDZD8-201ENST00000334464 PPP1R9BQ96SB3 815 aa18.52■□□□□ 0.56
PDZD8-201ENST00000334464 VWA3AA6NCI4 1184 aa18.52■□□□□ 0.56
PDZD8-201ENST00000334464 FAM83GA6ND36 823 aa18.52■□□□□ 0.55
PDZD8-201ENST00000334464 IGSF22Q8N9C0 903 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms