RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 GNA11P29992 359 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 STX2P32856 288 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 DRP2Q13474 957 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 ZNF530Q6P9A1 599 aaPredicted RBP6.14□□□□□ -1.43
PTPRB-202ENST00000334414 SYTL4Q96C24 671 aaPredicted RBP6.14□□□□□ -1.43
PTPRB-202ENST00000334414 EIF3BP55884 814 aaKnown RBP6.14□□□□□ -1.43
PTPRB-202ENST00000334414 METTL24Q5JXM2 366 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 TRIML1Q8N9V2 468 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 WHAMMQ8TF30 809 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 RMDN2Q96LZ7 410 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 PHACTR2O75167 634 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 ATP5HO75947 161 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 PRPF6O94906 941 aaKnown RBP6.14□□□□□ -1.43
PTPRB-202ENST00000334414 LDHCP07864 332 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 RBSNQ9H1K0 784 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 TMX1Q9H3N1 280 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 IFNKQ9P0W0 207 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 USP16Q9Y5T5 823 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 SCINQ9Y6U3 715 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 ARHGAP42A6NI28 874 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 IRX1P78414 480 aaPredicted RBP6.14□□□□□ -1.43
PTPRB-202ENST00000334414 ATP2B2Q01814 1243 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 WTAPQ15007 396 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 SLC9C1Q4G0N8 1177 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 TRIM15Q9C019 465 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 FAM96AQ9H5X1 160 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 PFDN4Q9NQP4 134 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 SAR1BQ9Y6B6 198 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 HLA-DOAP06340 250 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 EPB41P11171 864 aaKnown RBP6.14□□□□□ -1.43
PTPRB-202ENST00000334414 EPHB4P54760 987 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 SATB1Q01826 763 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 MTMR7Q9Y216 660 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 NLRP6P59044 892 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 NBPF20Q3BBV1 942 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 ZNF444Q8N0Y2 327 aaPredicted RBP6.14□□□□□ -1.43
PTPRB-202ENST00000334414 LCMT1Q9UIC8 334 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 ABCC2Q92887 1545 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 POLR3AO14802 1390 aaPredicted RBP6.14□□□□□ -1.43
PTPRB-202ENST00000334414 GOLGA8CPA6NN73 597 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 HSPA1LP34931 641 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 HS2ST1Q7LGA3 356 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 SRRM1Q8IYB3 904 aaKnown RBP6.14□□□□□ -1.43
PTPRB-202ENST00000334414 ST13P4Q8IZP2 240 aaPredicted RBP6.14□□□□□ -1.43
PTPRB-202ENST00000334414 IGSF22Q8N9C0 903 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 MAGEF1Q9HAY2 307 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 C6orf50Q9HD87 102 aa6.14□□□□□ -1.43
PTPRB-202ENST00000334414 A0A1B0GW55 424 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 E9PMD0 336 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 OPHN1O60890 802 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 DUX4L2P0CJ85 424 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 DUX4L3P0CJ86 424 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 DUX4L4P0CJ87 422 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 DUX4L5P0CJ88 424 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 DUX4L6P0CJ89 424 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 DUX4L7P0CJ90 424 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 ASIC1P78348 528 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 USP6NLQ92738 828 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 DUX4Q9UBX2 424 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 EXOC6BQ9Y2D4 811 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 MAPKBP1O60336 1514 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 B4DLN1 442 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 TTI1O43156 1089 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 ZBTB43O43298 467 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 MAGEA9P43362 315 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 MRPL12P52815 198 aaKnown RBP6.13□□□□□ -1.43
PTPRB-202ENST00000334414 PNMA8AQ86V59 439 aaPredicted RBP6.13□□□□□ -1.43
PTPRB-202ENST00000334414 ABTB2Q8N961 1025 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 RGS16O15492 202 aaPredicted RBP6.13□□□□□ -1.43
PTPRB-202ENST00000334414 SUN1O94901 812 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 HELBQ8NG08 1087 aaPredicted RBP6.13□□□□□ -1.43
PTPRB-202ENST00000334414 ALG1Q9BT22 464 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 RNF14Q9UBS8 474 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 MAGI1Q96QZ7 1491 aaPredicted RBP6.13□□□□□ -1.43
PTPRB-202ENST00000334414 MCF2L2Q86YR7 1114 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 ITGB1BP2Q9UKP3 347 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 ABCA10Q8WWZ4 1543 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 NUTM2BA6NNL0 878 aaPredicted RBP6.13□□□□□ -1.43
PTPRB-202ENST00000334414 NUTM2EB1AL46 878 aaPredicted RBP6.13□□□□□ -1.43
PTPRB-202ENST00000334414 U2AF2P26368 475 aaKnown RBP eCLIP6.13□□□□□ -1.43
PTPRB-202ENST00000334414 ZC3H6P61129 1189 aaKnown RBP6.13□□□□□ -1.43
PTPRB-202ENST00000334414 PAK1Q13153 545 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 MCMDC2Q4G0Z9 681 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 GSDMBQ8TAX9 411 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 MIS12Q9H081 205 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 RABEP2Q9H5N1 569 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 MAST1Q9Y2H9 1570 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 PUF60Q9UHX1 559 aaKnown RBP6.13□□□□□ -1.43
PTPRB-202ENST00000334414 FAM13AO94988 1023 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 POLR3DP05423 398 aaPredicted RBP6.13□□□□□ -1.43
PTPRB-202ENST00000334414 NLRP12P59046 1061 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 NBPF6Q5VWK0 638 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 HAUS3Q68CZ6 603 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 CRACR2BQ8N4Y2 399 aaPredicted RBP6.13□□□□□ -1.43
PTPRB-202ENST00000334414 NLRP7Q8WX94 980 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 HAUS1Q96CS2 278 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 NBPF4Q96M43 638 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 GIPC1O14908 333 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 BCRP11274 1271 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 KCNA4P22459 653 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms