RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 TSPY3P0CV98 308 aa13.64□□□□□ -0.23
HDAC6-201ENST00000334136 TSPY8P0CW00 308 aa13.64□□□□□ -0.23
HDAC6-201ENST00000334136 TSR1Q2NL82 804 aaKnown RBP13.64□□□□□ -0.23
HDAC6-201ENST00000334136 TMEM67Q5HYA8 995 aa13.64□□□□□ -0.23
HDAC6-201ENST00000334136 LRP10Q7Z4F1 713 aa13.64□□□□□ -0.23
HDAC6-201ENST00000334136 TGFBRAP1Q8WUH2 860 aa13.64□□□□□ -0.23
HDAC6-201ENST00000334136 CHAMP1Q96JM3 812 aa13.64□□□□□ -0.23
HDAC6-201ENST00000334136 FAM84BQ96KN1 310 aaPredicted RBP13.64□□□□□ -0.23
HDAC6-201ENST00000334136 PTPN14Q15678 1187 aa13.64□□□□□ -0.23
HDAC6-201ENST00000334136 C3orf67Q6ZVT6 689 aa13.64□□□□□ -0.23
HDAC6-201ENST00000334136 RNF181Q9P0P0 153 aa13.64□□□□□ -0.23
HDAC6-201ENST00000334136 RGPD1P0DJD0 1748 aa13.64□□□□□ -0.23
HDAC6-201ENST00000334136 COL18A1P39060 1754 aa13.64□□□□□ -0.23
HDAC6-201ENST00000334136 ECE2O60344 883 aa13.64□□□□□ -0.23
HDAC6-201ENST00000334136 MCAMP43121 646 aa13.64□□□□□ -0.23
HDAC6-201ENST00000334136 C17orf53Q8N3J3 647 aaPredicted RBP13.64□□□□□ -0.23
HDAC6-201ENST00000334136 SERPINC1P01008 464 aa13.63□□□□□ -0.23
HDAC6-201ENST00000334136 CTCFLQ8NI51 663 aaPredicted RBP13.63□□□□□ -0.23
HDAC6-201ENST00000334136 TSC1Q92574 1164 aa13.63□□□□□ -0.23
HDAC6-201ENST00000334136 UBE3CQ15386 1083 aa13.63□□□□□ -0.23
HDAC6-201ENST00000334136 TCEANC2Q96MN5 208 aa13.63□□□□□ -0.23
HDAC6-201ENST00000334136 SEC62Q99442 399 aaKnown RBP13.63□□□□□ -0.23
HDAC6-201ENST00000334136 SLC12A7Q9Y666 1083 aa13.63□□□□□ -0.23
HDAC6-201ENST00000334136 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.63□□□□□ -0.23
HDAC6-201ENST00000334136 BTDP43251 543 aa13.63□□□□□ -0.23
HDAC6-201ENST00000334136 HSP90B2PQ58FF3 399 aa13.63□□□□□ -0.23
HDAC6-201ENST00000334136 CLIP2Q9UDT6 1046 aa13.63□□□□□ -0.23
HDAC6-201ENST00000334136 CCDC96Q2M329 555 aa13.62□□□□□ -0.23
HDAC6-201ENST00000334136 CREB3L3Q68CJ9 461 aa13.62□□□□□ -0.23
HDAC6-201ENST00000334136 PIBF1Q8WXW3 757 aa13.62□□□□□ -0.23
HDAC6-201ENST00000334136 GJB2P29033 226 aa13.62□□□□□ -0.23
HDAC6-201ENST00000334136 CATIPQ7Z7H3 387 aa13.62□□□□□ -0.23
HDAC6-201ENST00000334136 PRIMPOLQ96LW4 560 aa13.62□□□□□ -0.23
HDAC6-201ENST00000334136 BRMS1Q9HCU9 246 aa13.62□□□□□ -0.23
HDAC6-201ENST00000334136 A0A0D9SFI3 127 aa13.62□□□□□ -0.23
HDAC6-201ENST00000334136 PDE4CQ08493 712 aa13.62□□□□□ -0.23
HDAC6-201ENST00000334136 NECAB1Q8N987 351 aa13.62□□□□□ -0.23
HDAC6-201ENST00000334136 CD2APQ9Y5K6 639 aa13.62□□□□□ -0.23
HDAC6-201ENST00000334136 CDKL5O76039 1030 aa13.61□□□□□ -0.23
HDAC6-201ENST00000334136 TNFAIP1Q13829 316 aa13.61□□□□□ -0.23
HDAC6-201ENST00000334136 OLFM4Q6UX06 510 aa13.61□□□□□ -0.23
HDAC6-201ENST00000334136 KAT14Q9H8E8 782 aa13.61□□□□□ -0.23
HDAC6-201ENST00000334136 NOL7Q9UMY1 257 aaKnown RBP13.61□□□□□ -0.23
HDAC6-201ENST00000334136 CCDC196A0A1B0GTZ2 297 aa13.61□□□□□ -0.23
HDAC6-201ENST00000334136 GRIN3BO60391 1043 aa13.61□□□□□ -0.23
HDAC6-201ENST00000334136 ZNF165P49910 485 aa13.61□□□□□ -0.23
HDAC6-201ENST00000334136 UBE2HP62256 183 aa13.61□□□□□ -0.23
HDAC6-201ENST00000334136 GUCY1B3Q02153 619 aa13.61□□□□□ -0.23
HDAC6-201ENST00000334136 CEP57L1Q8IYX8 460 aa13.61□□□□□ -0.23
HDAC6-201ENST00000334136 USP26Q9BXU7 913 aa13.61□□□□□ -0.23
HDAC6-201ENST00000334136 PKP1Q13835 747 aa13.61□□□□□ -0.23
HDAC6-201ENST00000334136 DIXDC1Q155Q3 683 aa13.61□□□□□ -0.23
HDAC6-201ENST00000334136 CCDC82Q8N4S0 544 aa13.61□□□□□ -0.23
HDAC6-201ENST00000334136 ZNF408Q9H9D4 720 aa13.61□□□□□ -0.23
HDAC6-201ENST00000334136 WTAPQ15007 396 aa13.61□□□□□ -0.23
HDAC6-201ENST00000334136 CCDC186Q7Z3E2 898 aa13.61□□□□□ -0.23
HDAC6-201ENST00000334136 PI4K2BQ8TCG2 481 aa13.61□□□□□ -0.23
HDAC6-201ENST00000334136 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.61□□□□□ -0.23
HDAC6-201ENST00000334136 LRRC2Q9BYS8 371 aa13.61□□□□□ -0.23
HDAC6-201ENST00000334136 PIH1D3Q9NQM4 214 aaKnown RBP13.61□□□□□ -0.23
HDAC6-201ENST00000334136 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.61□□□□□ -0.23
HDAC6-201ENST00000334136 V9GYY5 206 aaPredicted RBP13.61□□□□□ -0.23
HDAC6-201ENST00000334136 WDHD1O75717 1129 aaPredicted RBP13.6□□□□□ -0.23
HDAC6-201ENST00000334136 IARSP41252 1262 aaKnown RBP13.6□□□□□ -0.23
HDAC6-201ENST00000334136 ANAPC15P60006 121 aa13.6□□□□□ -0.23
HDAC6-201ENST00000334136 PATL2C9JE40 543 aaKnown RBP13.6□□□□□ -0.23
HDAC6-201ENST00000334136 SDR42E1Q8WUS8 393 aa13.6□□□□□ -0.23
HDAC6-201ENST00000334136 UBXN4Q92575 508 aa13.6□□□□□ -0.23
HDAC6-201ENST00000334136 PCMTD1Q96MG8 357 aaPredicted RBP13.6□□□□□ -0.23
HDAC6-201ENST00000334136 ZNF396Q96N95 335 aaPredicted RBP13.6□□□□□ -0.23
HDAC6-201ENST00000334136 FSD2A1L4K1 749 aa13.6□□□□□ -0.23
HDAC6-201ENST00000334136 TCP10L2B9ZVM9 353 aa13.6□□□□□ -0.23
HDAC6-201ENST00000334136 USP17L12C9JPN9 530 aa13.6□□□□□ -0.23
HDAC6-201ENST00000334136 USP17L21D6R901 530 aa13.6□□□□□ -0.23
HDAC6-201ENST00000334136 USP17L8P0C7I0 530 aa13.6□□□□□ -0.23
HDAC6-201ENST00000334136 PRDX5P30044 214 aa13.6□□□□□ -0.23
HDAC6-201ENST00000334136 CCDC178Q5BJE1 867 aa13.6□□□□□ -0.23
HDAC6-201ENST00000334136 CFAP45Q9UL16 551 aa13.6□□□□□ -0.23
HDAC6-201ENST00000334136 GOLGA8BA8MQT2 603 aa13.59□□□□□ -0.23
HDAC6-201ENST00000334136 IPO7O95373 1038 aaKnown RBP13.59□□□□□ -0.23
HDAC6-201ENST00000334136 CYP2E1P05181 493 aaPredicted RBP13.59□□□□□ -0.23
HDAC6-201ENST00000334136 ADD2P35612 726 aa13.59□□□□□ -0.23
HDAC6-201ENST00000334136 ZNF526Q8TF50 670 aaPredicted RBP13.59□□□□□ -0.23
HDAC6-201ENST00000334136 BRF1Q92994 677 aa13.59□□□□□ -0.23
HDAC6-201ENST00000334136 ZNRF3Q9ULT6 936 aa13.59□□□□□ -0.23
HDAC6-201ENST00000334136 CLRN2A0PK11 232 aa13.59□□□□□ -0.23
HDAC6-201ENST00000334136 MECOMQ03112 1051 aa13.59□□□□□ -0.23
HDAC6-201ENST00000334136 DNM1Q05193 864 aaKnown RBP13.59□□□□□ -0.23
HDAC6-201ENST00000334136 HS1BP3Q53T59 392 aa13.59□□□□□ -0.23
HDAC6-201ENST00000334136 SCAND2PQ9GZW5 306 aaPredicted RBP13.59□□□□□ -0.23
HDAC6-201ENST00000334136 USP54Q70EL1 1684 aa13.59□□□□□ -0.23
HDAC6-201ENST00000334136 GLI3P10071 1580 aa13.59□□□□□ -0.23
HDAC6-201ENST00000334136 PRDM1O75626 825 aa13.59□□□□□ -0.23
HDAC6-201ENST00000334136 HOXA10P31260 410 aaPredicted RBP13.59□□□□□ -0.23
HDAC6-201ENST00000334136 PRKG1Q13976 671 aa13.59□□□□□ -0.23
HDAC6-201ENST00000334136 MICU3Q86XE3 530 aa13.59□□□□□ -0.23
HDAC6-201ENST00000334136 TMTC2Q8N394 836 aa13.59□□□□□ -0.23
HDAC6-201ENST00000334136 HOOK2Q96ED9 719 aa13.59□□□□□ -0.23
HDAC6-201ENST00000334136 GOLGA8AA7E2F4 631 aa13.58□□□□□ -0.23
HDAC6-201ENST00000334136 POLR3GO15318 223 aaPredicted RBP13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms