RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 EPHX2P34913 555 aa19.77■□□□□ 0.75
SHOX-201ENST00000334060 MAP4K1Q92918 833 aa19.77■□□□□ 0.75
SHOX-201ENST00000334060 TMEM39BQ9GZU3 492 aa19.77■□□□□ 0.75
SHOX-201ENST00000334060 TAF1DQ9H5J8 278 aaPredicted RBP19.77■□□□□ 0.75
SHOX-201ENST00000334060 GGA3Q9NZ52 723 aa19.77■□□□□ 0.75
SHOX-201ENST00000334060 FOCADQ5VW36 1801 aa19.76■□□□□ 0.75
SHOX-201ENST00000334060 PATL2C9JE40 543 aaKnown RBP19.76■□□□□ 0.75
SHOX-201ENST00000334060 BAG3O95817 575 aa19.76■□□□□ 0.75
SHOX-201ENST00000334060 USP5P45974 858 aa19.76■□□□□ 0.75
SHOX-201ENST00000334060 PLCD1P51178 756 aa19.76■□□□□ 0.75
SHOX-201ENST00000334060 CTDSPL2Q05D32 466 aa19.76■□□□□ 0.75
SHOX-201ENST00000334060 EAPPQ56P03 285 aaPredicted RBP19.76■□□□□ 0.75
SHOX-201ENST00000334060 MTMR14Q8NCE2 650 aa19.76■□□□□ 0.75
SHOX-201ENST00000334060 ZC3H4Q9UPT8 1303 aaKnown RBP19.76■□□□□ 0.75
SHOX-201ENST00000334060 NAV1Q8NEY1 1877 aa19.76■□□□□ 0.75
SHOX-201ENST00000334060 LMOD1P29536 600 aaPredicted RBP19.75■□□□□ 0.75
SHOX-201ENST00000334060 CTR9Q6PD62 1173 aa19.75■□□□□ 0.75
SHOX-201ENST00000334060 SLF2Q8IX21 1173 aa19.75■□□□□ 0.75
SHOX-201ENST00000334060 DYNLL2Q96FJ2 89 aa19.75■□□□□ 0.75
SHOX-201ENST00000334060 RPAP1Q9BWH6 1393 aaPredicted RBP19.75■□□□□ 0.75
SHOX-201ENST00000334060 CRNKL1Q9BZJ0 848 aaKnown RBP19.75■□□□□ 0.75
SHOX-201ENST00000334060 SIPA1L1O43166 1804 aa19.75■□□□□ 0.75
SHOX-201ENST00000334060 USP17L12C9JPN9 530 aa19.75■□□□□ 0.75
SHOX-201ENST00000334060 USP17L21D6R901 530 aa19.75■□□□□ 0.75
SHOX-201ENST00000334060 CYP21A2P08686 494 aa19.75■□□□□ 0.75
SHOX-201ENST00000334060 STOX1Q6ZVD7 989 aa19.75■□□□□ 0.75
SHOX-201ENST00000334060 TBC1D10CQ8IV04 446 aa19.75■□□□□ 0.75
SHOX-201ENST00000334060 SLC44A5Q8NCS7 719 aa19.75■□□□□ 0.75
SHOX-201ENST00000334060 ADARB2Q9NS39 739 aaKnown RBP19.75■□□□□ 0.75
SHOX-201ENST00000334060 MCM9Q9NXL9 1143 aa19.75■□□□□ 0.75
SHOX-201ENST00000334060 POLR2AP24928 1970 aaKnown RBP19.74■□□□□ 0.75
SHOX-201ENST00000334060 SHROOM1Q2M3G4 852 aaPredicted RBP19.74■□□□□ 0.75
SHOX-201ENST00000334060 NOL10Q9BSC4 688 aaKnown RBP19.74■□□□□ 0.75
SHOX-201ENST00000334060 ADM5C9JUS6 153 aa19.74■□□□□ 0.75
SHOX-201ENST00000334060 TDO2P48775 406 aa19.74■□□□□ 0.75
SHOX-201ENST00000334060 NECTIN1Q15223 517 aa19.74■□□□□ 0.75
SHOX-201ENST00000334060 ADCK5Q3MIX3 580 aa19.74■□□□□ 0.75
SHOX-201ENST00000334060 DSCC1Q9BVC3 393 aa19.74■□□□□ 0.75
SHOX-201ENST00000334060 MINDY4BA8MYZ0 360 aa19.73■□□□□ 0.75
SHOX-201ENST00000334060 CPA1P15085 419 aa19.73■□□□□ 0.75
SHOX-201ENST00000334060 OSBPL5Q9H0X9 879 aaPredicted RBP19.73■□□□□ 0.75
SHOX-201ENST00000334060 SLC27A2O14975 620 aa19.72■□□□□ 0.75
SHOX-201ENST00000334060 KIAA1211Q6ZU35 1233 aa19.72■□□□□ 0.75
SHOX-201ENST00000334060 IDI2Q9BXS1 227 aa19.72■□□□□ 0.75
SHOX-201ENST00000334060 NAPBQ9H115 298 aa19.72■□□□□ 0.75
SHOX-201ENST00000334060 PGAP2Q9UHJ9 254 aa19.72■□□□□ 0.75
SHOX-201ENST00000334060 PRDM1O75626 825 aa19.72■□□□□ 0.75
SHOX-201ENST00000334060 CREB3L3Q68CJ9 461 aa19.72■□□□□ 0.75
SHOX-201ENST00000334060 TICAM2Q86XR7 235 aa19.72■□□□□ 0.75
SHOX-201ENST00000334060 MYH1P12882 1939 aa19.71■□□□□ 0.75
SHOX-201ENST00000334060 REC8O95072 547 aa19.71■□□□□ 0.75
SHOX-201ENST00000334060 RASA3Q14644 834 aa19.71■□□□□ 0.75
SHOX-201ENST00000334060 KIF2CQ99661 725 aa19.71■□□□□ 0.75
SHOX-201ENST00000334060 DNAJC18Q9H819 358 aa19.71■□□□□ 0.75
SHOX-201ENST00000334060 SCN4AP35499 1836 aa19.7■□□□□ 0.74
SHOX-201ENST00000334060 HSPA4P34932 840 aa19.7■□□□□ 0.74
SHOX-201ENST00000334060 MAP1SQ66K74 1059 aaPredicted RBP19.7■□□□□ 0.74
SHOX-201ENST00000334060 TEPSINQ96N21 525 aa19.7■□□□□ 0.74
SHOX-201ENST00000334060 SNX14Q9Y5W7 946 aa19.7■□□□□ 0.74
SHOX-201ENST00000334060 NEDD4P46934 1319 aa19.69■□□□□ 0.74
SHOX-201ENST00000334060 GNAT2P19087 354 aa19.69■□□□□ 0.74
SHOX-201ENST00000334060 GLIS2Q9BZE0 524 aaPredicted RBP19.69■□□□□ 0.74
SHOX-201ENST00000334060 ATP8A2Q9NTI2 1148 aa19.69■□□□□ 0.74
SHOX-201ENST00000334060 SSC5DA1L4H1 1573 aa19.69■□□□□ 0.74
SHOX-201ENST00000334060 LAMB1P07942 1786 aa19.68■□□□□ 0.74
SHOX-201ENST00000334060 PLCG2P16885 1265 aa19.68■□□□□ 0.74
SHOX-201ENST00000334060 PPARAQ07869 468 aa19.68■□□□□ 0.74
SHOX-201ENST00000334060 RRP1BQ14684 758 aaKnown RBP19.68■□□□□ 0.74
SHOX-201ENST00000334060 NBPF12Q5TAG4 269 aaPredicted RBP19.68■□□□□ 0.74
SHOX-201ENST00000334060 MIGA2Q7L4E1 593 aa19.68■□□□□ 0.74
SHOX-201ENST00000334060 TCEANC2Q96MN5 208 aa19.68■□□□□ 0.74
SHOX-201ENST00000334060 C22orf23Q9BZE7 217 aa19.68■□□□□ 0.74
SHOX-201ENST00000334060 DEFB129Q9H1M3 183 aa19.68■□□□□ 0.74
SHOX-201ENST00000334060 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.68■□□□□ 0.74
SHOX-201ENST00000334060 TRAF5O00463 557 aa19.68■□□□□ 0.74
SHOX-201ENST00000334060 IGSF3O75054 1194 aa19.68■□□□□ 0.74
SHOX-201ENST00000334060 C12orf60Q5U649 245 aa19.68■□□□□ 0.74
SHOX-201ENST00000334060 ZSCAN29Q8IWY8 852 aaPredicted RBP19.68■□□□□ 0.74
SHOX-201ENST00000334060 MYO1BO43795 1136 aa19.67■□□□□ 0.74
SHOX-201ENST00000334060 ALX1Q15699 326 aa19.67■□□□□ 0.74
SHOX-201ENST00000334060 CHST3Q7LGC8 479 aa19.67■□□□□ 0.74
SHOX-201ENST00000334060 TBC1D32Q96NH3 1257 aa19.67■□□□□ 0.74
SHOX-201ENST00000334060 U3KPZ7 1027 aaPredicted RBP19.67■□□□□ 0.74
SHOX-201ENST00000334060 LAMA4Q16363 1823 aa19.67■□□□□ 0.74
SHOX-201ENST00000334060 ATRNL1Q5VV63 1379 aa19.66■□□□□ 0.74
SHOX-201ENST00000334060 POLR3DP05423 398 aaPredicted RBP19.66■□□□□ 0.74
SHOX-201ENST00000334060 VEGFAP15692 232 aaPredicted RBP19.66■□□□□ 0.74
SHOX-201ENST00000334060 JAG1P78504 1218 aa19.66■□□□□ 0.74
SHOX-201ENST00000334060 TMED8Q6PL24 325 aaPredicted RBP19.66■□□□□ 0.74
SHOX-201ENST00000334060 USP48Q86UV5 1035 aa19.66■□□□□ 0.74
SHOX-201ENST00000334060 IQCA1LA6NCM1 817 aa19.66■□□□□ 0.74
SHOX-201ENST00000334060 USP50Q70EL3 339 aaPredicted RBP19.66■□□□□ 0.74
SHOX-201ENST00000334060 TMOD2Q9NZR1 351 aa19.66■□□□□ 0.74
SHOX-201ENST00000334060 CLEC11AQ9Y240 323 aa19.66■□□□□ 0.74
SHOX-201ENST00000334060 PRKG1Q13976 671 aa19.65■□□□□ 0.74
SHOX-201ENST00000334060 FAM151AQ8WW52 585 aa19.65■□□□□ 0.74
SHOX-201ENST00000334060 CSRNP1Q96S65 589 aa19.65■□□□□ 0.74
SHOX-201ENST00000334060 UPF3BQ9BZI7 483 aaKnown RBP19.65■□□□□ 0.74
SHOX-201ENST00000334060 NACAP1Q9BZK3 213 aa19.65■□□□□ 0.74
SHOX-201ENST00000334060 E7EWF7 191 aa19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms