RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 PTPN12Q05209 780 aaKnown RBP12.79□□□□□ -0.36
POLR1B-202ENST00000333990 EDC3Q96F86 508 aaKnown RBP12.79□□□□□ -0.36
POLR1B-202ENST00000333990 CARMIL3Q8ND23 1372 aa12.78□□□□□ -0.36
POLR1B-202ENST00000333990 TOP1P11387 765 aaKnown RBP12.78□□□□□ -0.36
POLR1B-202ENST00000333990 BTDP43251 543 aa12.78□□□□□ -0.36
POLR1B-202ENST00000333990 PLEKHG2Q9H7P9 1386 aa12.78□□□□□ -0.36
POLR1B-202ENST00000333990 RRAGBQ5VZM2 374 aa12.78□□□□□ -0.36
POLR1B-202ENST00000333990 KRI1Q8N9T8 703 aaKnown RBP12.78□□□□□ -0.36
POLR1B-202ENST00000333990 E7EWF7 191 aa12.78□□□□□ -0.36
POLR1B-202ENST00000333990 IBSPP21815 317 aaPredicted RBP12.78□□□□□ -0.36
POLR1B-202ENST00000333990 RC3H1Q5TC82 1133 aaKnown RBP12.78□□□□□ -0.36
POLR1B-202ENST00000333990 TCERG1LQ5VWI1 586 aa12.78□□□□□ -0.36
POLR1B-202ENST00000333990 CCDC174Q6PII3 467 aa12.78□□□□□ -0.36
POLR1B-202ENST00000333990 DCPSQ96C86 337 aaKnown RBP12.78□□□□□ -0.36
POLR1B-202ENST00000333990 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.78□□□□□ -0.36
POLR1B-202ENST00000333990 CTDSPL2Q05D32 466 aa12.77□□□□□ -0.36
POLR1B-202ENST00000333990 SPA17Q15506 151 aa12.77□□□□□ -0.36
POLR1B-202ENST00000333990 ARHGAP29Q52LW3 1261 aa12.77□□□□□ -0.36
POLR1B-202ENST00000333990 BRDTQ58F21 947 aaPredicted RBP12.77□□□□□ -0.36
POLR1B-202ENST00000333990 ERCC4Q92889 916 aaPredicted RBP12.77□□□□□ -0.36
POLR1B-202ENST00000333990 COA1Q9GZY4 146 aa12.77□□□□□ -0.36
POLR1B-202ENST00000333990 V9GY48 417 aaPredicted RBP12.77□□□□□ -0.36
POLR1B-202ENST00000333990 DEPDC5O75140 1603 aa12.77□□□□□ -0.37
POLR1B-202ENST00000333990 PSMA7O14818 248 aa12.77□□□□□ -0.37
POLR1B-202ENST00000333990 DKC1O60832 514 aaKnown RBP eCLIP12.77□□□□□ -0.37
POLR1B-202ENST00000333990 NT5C2P49902 561 aa12.77□□□□□ -0.37
POLR1B-202ENST00000333990 MCTP2Q6DN12 878 aa12.77□□□□□ -0.37
POLR1B-202ENST00000333990 TMEM131LA2VDJ0 1609 aa12.77□□□□□ -0.37
POLR1B-202ENST00000333990 LIG1P18858 919 aa12.77□□□□□ -0.37
POLR1B-202ENST00000333990 IQUBQ8NA54 791 aa12.77□□□□□ -0.37
POLR1B-202ENST00000333990 PIM2Q9P1W9 311 aa12.77□□□□□ -0.37
POLR1B-202ENST00000333990 ATF5Q9Y2D1 282 aaPredicted RBP12.77□□□□□ -0.37
POLR1B-202ENST00000333990 CPDO75976 1380 aa12.77□□□□□ -0.37
POLR1B-202ENST00000333990 BIN1O00499 593 aa12.76□□□□□ -0.37
POLR1B-202ENST00000333990 HSPD1P10809 573 aaKnown RBP12.76□□□□□ -0.37
POLR1B-202ENST00000333990 IRX3P78415 501 aaPredicted RBP12.76□□□□□ -0.37
POLR1B-202ENST00000333990 PABPC4Q13310 644 aaKnown RBP eCLIP12.76□□□□□ -0.371e-6■□□□□ 9.5
POLR1B-202ENST00000333990 MTX1Q13505 466 aa12.76□□□□□ -0.37
POLR1B-202ENST00000333990 HLFQ16534 295 aa12.76□□□□□ -0.37
POLR1B-202ENST00000333990 EAPPQ56P03 285 aaPredicted RBP12.76□□□□□ -0.37
POLR1B-202ENST00000333990 KIAA1328Q86T90 577 aa12.76□□□□□ -0.37
POLR1B-202ENST00000333990 STK24Q9Y6E0 443 aa12.76□□□□□ -0.37
POLR1B-202ENST00000333990 USP32Q8NFA0 1604 aa12.76□□□□□ -0.37
POLR1B-202ENST00000333990 LRRC7Q96NW7 1537 aa12.76□□□□□ -0.37
POLR1B-202ENST00000333990 SPATA31A5Q5VU36 1347 aa12.76□□□□□ -0.37
POLR1B-202ENST00000333990 SPATA31A7Q8IWB4 1347 aa12.76□□□□□ -0.37
POLR1B-202ENST00000333990 CPA1P15085 419 aa12.76□□□□□ -0.37
POLR1B-202ENST00000333990 SYT1P21579 422 aa12.76□□□□□ -0.37
POLR1B-202ENST00000333990 MARCKSP29966 332 aaPredicted RBP12.76□□□□□ -0.37
POLR1B-202ENST00000333990 DNM1Q05193 864 aaKnown RBP12.76□□□□□ -0.37
POLR1B-202ENST00000333990 CCDC181Q5TID7 509 aa12.76□□□□□ -0.37
POLR1B-202ENST00000333990 KRT25Q7Z3Z0 450 aa12.76□□□□□ -0.37
POLR1B-202ENST00000333990 ARHGEF1Q92888 912 aaKnown RBP12.76□□□□□ -0.37
POLR1B-202ENST00000333990 BICD1Q96G01 975 aa12.76□□□□□ -0.37
POLR1B-202ENST00000333990 TRIM47Q96LD4 638 aa12.76□□□□□ -0.37
POLR1B-202ENST00000333990 PRKCSHP14314 528 aaPredicted RBP12.76□□□□□ -0.37
POLR1B-202ENST00000333990 SCNN1DP51172 638 aa12.76□□□□□ -0.37
POLR1B-202ENST00000333990 ASIC1P78348 528 aa12.76□□□□□ -0.37
POLR1B-202ENST00000333990 NCBP1Q09161 790 aaKnown RBP12.76□□□□□ -0.37
POLR1B-202ENST00000333990 MYO3AQ8NEV4 1616 aa12.76□□□□□ -0.37
POLR1B-202ENST00000333990 CD163L1Q9NR16 1453 aa12.76□□□□□ -0.37
POLR1B-202ENST00000333990 A0A0D9SFI3 127 aa12.76□□□□□ -0.37
POLR1B-202ENST00000333990 KCNQ2O43526 872 aa12.76□□□□□ -0.37
POLR1B-202ENST00000333990 ADORA1P30542 326 aa12.76□□□□□ -0.37
POLR1B-202ENST00000333990 POLA2Q14181 598 aa12.76□□□□□ -0.37
POLR1B-202ENST00000333990 CNPY2Q9Y2B0 182 aa12.76□□□□□ -0.37
POLR1B-202ENST00000333990 ADGRB1O14514 1584 aa12.75□□□□□ -0.37
POLR1B-202ENST00000333990 NRKQ7Z2Y5 1582 aa12.75□□□□□ -0.37
POLR1B-202ENST00000333990 IGKV5-2P06315 115 aa12.75□□□□□ -0.37
POLR1B-202ENST00000333990 ZYXQ15942 572 aaKnown RBP12.75□□□□□ -0.37
POLR1B-202ENST00000333990 ISCA1Q9BUE6 129 aa12.75□□□□□ -0.37
POLR1B-202ENST00000333990 BEGAINQ9BUH8 593 aa12.75□□□□□ -0.37
POLR1B-202ENST00000333990 CLIP2Q9UDT6 1046 aa12.75□□□□□ -0.37
POLR1B-202ENST00000333990 KIF2AO00139 706 aaPredicted RBP12.75□□□□□ -0.37
POLR1B-202ENST00000333990 YEATS4O95619 227 aa12.75□□□□□ -0.37
POLR1B-202ENST00000333990 ZMYM1Q5SVZ6 1142 aa12.75□□□□□ -0.37
POLR1B-202ENST00000333990 VTI1AQ96AJ9 217 aa12.75□□□□□ -0.37
POLR1B-202ENST00000333990 ERLIN2O94905 339 aa12.75□□□□□ -0.37
POLR1B-202ENST00000333990 MCM7P33993 719 aa12.75□□□□□ -0.37
POLR1B-202ENST00000333990 LETM2Q2VYF4 491 aa12.75□□□□□ -0.37
POLR1B-202ENST00000333990 CERKLQ49MI3 558 aaPredicted RBP12.75□□□□□ -0.37
POLR1B-202ENST00000333990 SWAP70Q9UH65 585 aa12.75□□□□□ -0.37
POLR1B-202ENST00000333990 BACH1O14867 736 aa12.74□□□□□ -0.37
POLR1B-202ENST00000333990 ZSCAN12O43309 604 aa12.74□□□□□ -0.37
POLR1B-202ENST00000333990 HSP90B2PQ58FF3 399 aa12.74□□□□□ -0.37
POLR1B-202ENST00000333990 ZNF654Q8IZM8 581 aa12.74□□□□□ -0.37
POLR1B-202ENST00000333990 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.74□□□□□ -0.37
POLR1B-202ENST00000333990 TAF4BQ92750 862 aa12.74□□□□□ -0.37
POLR1B-202ENST00000333990 ZNF274Q96GC6 653 aaPredicted RBP12.74□□□□□ -0.37
POLR1B-202ENST00000333990 SLIT1O75093 1534 aa12.74□□□□□ -0.37
POLR1B-202ENST00000333990 NEMFO60524 1076 aa12.74□□□□□ -0.37
POLR1B-202ENST00000333990 SEC24BO95487 1268 aa12.74□□□□□ -0.37
POLR1B-202ENST00000333990 GSPT1P15170 499 aaKnown RBP12.74□□□□□ -0.37
POLR1B-202ENST00000333990 AFMP43652 599 aa12.74□□□□□ -0.37
POLR1B-202ENST00000333990 PLCD1P51178 756 aa12.74□□□□□ -0.37
POLR1B-202ENST00000333990 ADCY7P51828 1080 aa12.74□□□□□ -0.37
POLR1B-202ENST00000333990 NONOQ15233 471 aaKnown RBP eCLIP12.74□□□□□ -0.37
POLR1B-202ENST00000333990 IQCEQ6IPM2 695 aa12.74□□□□□ -0.37
POLR1B-202ENST00000333990 HS2ST1Q7LGA3 356 aa12.74□□□□□ -0.37
POLR1B-202ENST00000333990 FCHSD1Q86WN1 690 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms