RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 SYKP43405 635 aa12.71□□□□□ -0.38
CCDC87-201ENST00000333861 NCAPH2Q6IBW4 605 aa12.71□□□□□ -0.38
CCDC87-201ENST00000333861 PPM1EQ8WY54 764 aa12.71□□□□□ -0.38
CCDC87-201ENST00000333861 PUS3Q9BZE2 481 aaKnown RBP12.71□□□□□ -0.38
CCDC87-201ENST00000333861 DBF4Q9UBU7 674 aaPredicted RBP12.71□□□□□ -0.38
CCDC87-201ENST00000333861 MARF1Q9Y4F3 1742 aaKnown RBP12.7□□□□□ -0.38
CCDC87-201ENST00000333861 ZSCAN12O43309 604 aa12.7□□□□□ -0.38
CCDC87-201ENST00000333861 ALDH1L1O75891 902 aa12.7□□□□□ -0.38
CCDC87-201ENST00000333861 CASP8Q14790 479 aa12.7□□□□□ -0.38
CCDC87-201ENST00000333861 LRRC24Q50LG9 513 aa12.7□□□□□ -0.38
CCDC87-201ENST00000333861 ZNF569Q5MCW4 686 aa12.7□□□□□ -0.38
CCDC87-201ENST00000333861 MYSM1Q5VVJ2 828 aa12.7□□□□□ -0.38
CCDC87-201ENST00000333861 ADALQ6DHV7 355 aa12.7□□□□□ -0.38
CCDC87-201ENST00000333861 SHC4Q6S5L8 630 aa12.7□□□□□ -0.38
CCDC87-201ENST00000333861 KLHL34Q8N239 644 aa12.7□□□□□ -0.38
CCDC87-201ENST00000333861 PXDNQ92626 1479 aa12.7□□□□□ -0.38
CCDC87-201ENST00000333861 CCDC151A5D8V7 595 aa12.7□□□□□ -0.38
CCDC87-201ENST00000333861 GIGYF1O75420 1035 aaPredicted RBP12.7□□□□□ -0.38
CCDC87-201ENST00000333861 HSPD1P10809 573 aaKnown RBP12.7□□□□□ -0.38
CCDC87-201ENST00000333861 HSP90B2PQ58FF3 399 aa12.7□□□□□ -0.38
CCDC87-201ENST00000333861 HDXQ7Z353 690 aa12.7□□□□□ -0.38
CCDC87-201ENST00000333861 MICU3Q86XE3 530 aa12.7□□□□□ -0.38
CCDC87-201ENST00000333861 PSD3Q9NYI0 1048 aa12.7□□□□□ -0.38
CCDC87-201ENST00000333861 NFAT5O94916 1531 aa12.7□□□□□ -0.38
CCDC87-201ENST00000333861 SOS2Q07890 1332 aaPredicted RBP12.7□□□□□ -0.38
CCDC87-201ENST00000333861 USP42Q9H9J4 1324 aaKnown RBP12.7□□□□□ -0.38
CCDC87-201ENST00000333861 SRGAP2O75044 1071 aa12.69□□□□□ -0.38
CCDC87-201ENST00000333861 LMBR1LQ6UX01 489 aa12.69□□□□□ -0.38
CCDC87-201ENST00000333861 CAPZA3Q96KX2 299 aa12.69□□□□□ -0.38
CCDC87-201ENST00000333861 MPHOSPH8Q99549 860 aa12.69□□□□□ -0.38
CCDC87-201ENST00000333861 KDRP35968 1356 aa12.69□□□□□ -0.38
CCDC87-201ENST00000333861 AFMP43652 599 aa12.69□□□□□ -0.38
CCDC87-201ENST00000333861 CCT5P48643 541 aa12.69□□□□□ -0.38
CCDC87-201ENST00000333861 IQUBQ8NA54 791 aa12.69□□□□□ -0.38
CCDC87-201ENST00000333861 NOA1Q8NC60 698 aaKnown RBP12.69□□□□□ -0.38
CCDC87-201ENST00000333861 BRMS1Q9HCU9 246 aa12.69□□□□□ -0.38
CCDC87-201ENST00000333861 HDAC6Q9UBN7 1215 aa12.69□□□□□ -0.38
CCDC87-201ENST00000333861 KCNJ14Q9UNX9 436 aa12.69□□□□□ -0.38
CCDC87-201ENST00000333861 TRPM3Q9HCF6 1732 aaPredicted RBP12.69□□□□□ -0.38
CCDC87-201ENST00000333861 GOLGB1Q14789 3259 aaKnown RBP12.69□□□□□ -0.38
CCDC87-201ENST00000333861 CUTAO60888 179 aa12.68□□□□□ -0.38
CCDC87-201ENST00000333861 AKAP17AQ02040 695 aaKnown RBP12.68□□□□□ -0.38
CCDC87-201ENST00000333861 PTPN12Q05209 780 aaKnown RBP12.68□□□□□ -0.38
CCDC87-201ENST00000333861 KIF4BQ2VIQ3 1234 aa12.68□□□□□ -0.38
CCDC87-201ENST00000333861 AXDND1Q5T1B0 1012 aaPredicted RBP12.68□□□□□ -0.38
CCDC87-201ENST00000333861 ANO1Q5XXA6 986 aa12.68□□□□□ -0.38
CCDC87-201ENST00000333861 RAD9BQ6WBX8 426 aa12.68□□□□□ -0.38
CCDC87-201ENST00000333861 METTL16Q86W50 562 aaKnown RBP12.68□□□□□ -0.38
CCDC87-201ENST00000333861 ZKSCAN3Q9BRR0 538 aa12.68□□□□□ -0.38
CCDC87-201ENST00000333861 TEX13AQ9BXU3 409 aaPredicted RBP12.68□□□□□ -0.38
CCDC87-201ENST00000333861 L1RE1Q9UN81 338 aa12.68□□□□□ -0.38
CCDC87-201ENST00000333861 MAPK8IP1Q9UQF2 711 aa12.68□□□□□ -0.38
CCDC87-201ENST00000333861 UBAP1LF5GYI3 381 aa12.68□□□□□ -0.38
CCDC87-201ENST00000333861 CCT6AP40227 531 aaKnown RBP12.68□□□□□ -0.38
CCDC87-201ENST00000333861 MMP14P50281 582 aa12.68□□□□□ -0.38
CCDC87-201ENST00000333861 TADA2BQ86TJ2 420 aa12.68□□□□□ -0.38
CCDC87-201ENST00000333861 VSTM4Q8IW00 320 aa12.68□□□□□ -0.38
CCDC87-201ENST00000333861 OSBP2Q969R2 916 aa12.68□□□□□ -0.38
CCDC87-201ENST00000333861 NFE2L3Q9Y4A8 694 aa12.68□□□□□ -0.38
CCDC87-201ENST00000333861 SAMM50Q9Y512 469 aa12.68□□□□□ -0.38
CCDC87-201ENST00000333861 PRC1O43663 620 aa12.68□□□□□ -0.38
CCDC87-201ENST00000333861 RNF40O75150 1001 aa12.68□□□□□ -0.38
CCDC87-201ENST00000333861 STRN4Q9NRL3 753 aa12.68□□□□□ -0.38
CCDC87-201ENST00000333861 U3KPZ7 1027 aaPredicted RBP12.68□□□□□ -0.38
CCDC87-201ENST00000333861 PALLDQ8WX93 1383 aa12.68□□□□□ -0.38
CCDC87-201ENST00000333861 MED1Q15648 1581 aaPredicted RBP12.68□□□□□ -0.38
CCDC87-201ENST00000333861 A0A087WZG4 1122 aa12.67□□□□□ -0.38
CCDC87-201ENST00000333861 ARHGAP6O43182 974 aa12.67□□□□□ -0.38
CCDC87-201ENST00000333861 CCP110O43303 1012 aa12.67□□□□□ -0.38
CCDC87-201ENST00000333861 LTN1O94822 1766 aa12.67□□□□□ -0.38
CCDC87-201ENST00000333861 ADORA1P30542 326 aa12.67□□□□□ -0.38
CCDC87-201ENST00000333861 ATP2B2Q01814 1243 aa12.67□□□□□ -0.38
CCDC87-201ENST00000333861 SF3A3Q12874 501 aaKnown RBP eCLIP12.67□□□□□ -0.38
CCDC87-201ENST00000333861 MCTP2Q6DN12 878 aa12.67□□□□□ -0.38
CCDC87-201ENST00000333861 TC2NQ8N9U0 490 aa12.67□□□□□ -0.38
CCDC87-201ENST00000333861 FAM208AQ9UK61 1670 aaKnown RBP12.67□□□□□ -0.38
CCDC87-201ENST00000333861 SUFUQ9UMX1 484 aa12.67□□□□□ -0.38
CCDC87-201ENST00000333861 MAST3O60307 1309 aa12.67□□□□□ -0.38
CCDC87-201ENST00000333861 FAM170AA1A519 330 aa12.67□□□□□ -0.38
CCDC87-201ENST00000333861 HIP1O00291 1037 aa12.67□□□□□ -0.38
CCDC87-201ENST00000333861 CCDC172P0C7W6 258 aa12.67□□□□□ -0.38
CCDC87-201ENST00000333861 MAP2K2P36507 400 aa12.67□□□□□ -0.38
CCDC87-201ENST00000333861 MYL5Q02045 173 aa12.67□□□□□ -0.38
CCDC87-201ENST00000333861 NAA16Q6N069 864 aaPredicted RBP12.67□□□□□ -0.38
CCDC87-201ENST00000333861 MMS22LQ6ZRQ5 1243 aa12.67□□□□□ -0.38
CCDC87-201ENST00000333861 SRGAP1Q7Z6B7 1085 aa12.67□□□□□ -0.38
CCDC87-201ENST00000333861 MED15Q96RN5 788 aa12.67□□□□□ -0.38
CCDC87-201ENST00000333861 RTEL1Q9NZ71 1219 aa12.67□□□□□ -0.38
CCDC87-201ENST00000333861 RAI14Q9P0K7 980 aa12.67□□□□□ -0.38
CCDC87-201ENST00000333861 EXOC5O00471 708 aa12.66□□□□□ -0.38
CCDC87-201ENST00000333861 EXOSC10Q01780 885 aaKnown RBP12.66□□□□□ -0.38
CCDC87-201ENST00000333861 SCARF1Q14162 830 aa12.66□□□□□ -0.38
CCDC87-201ENST00000333861 SLC35F6Q8N357 371 aa12.66□□□□□ -0.38
CCDC87-201ENST00000333861 ANKRD20A12PQ8NF67 263 aa12.66□□□□□ -0.38
CCDC87-201ENST00000333861 HMG20BQ9P0W2 317 aa12.66□□□□□ -0.38
CCDC87-201ENST00000333861 RGPD1P0DJD0 1748 aa12.66□□□□□ -0.38
CCDC87-201ENST00000333861 NEURL1BA8MQ27 555 aa12.66□□□□□ -0.38
CCDC87-201ENST00000333861 RNF225M0QZC1 329 aaPredicted RBP12.66□□□□□ -0.38
CCDC87-201ENST00000333861 ERLIN2O94905 339 aa12.66□□□□□ -0.38
CCDC87-201ENST00000333861 KRT32Q14532 448 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms