RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 TTC39AQ5SRH9 613 aa16.53■□□□□ 0.24
SNX20-202ENST00000330943 EXOC4Q96A65 974 aa16.53■□□□□ 0.24
SNX20-202ENST00000330943 PUF60Q9UHX1 559 aaKnown RBP16.53■□□□□ 0.24
SNX20-202ENST00000330943 LCMT1Q9UIC8 334 aa16.53■□□□□ 0.24
SNX20-202ENST00000330943 H7C1W4 665 aa16.53■□□□□ 0.24
SNX20-202ENST00000330943 CWC15Q9P013 229 aaKnown RBP16.53■□□□□ 0.24
SNX20-202ENST00000330943 MAN1B1Q9UKM7 699 aa16.53■□□□□ 0.24
SNX20-202ENST00000330943 CPDO75976 1380 aa16.53■□□□□ 0.24
SNX20-202ENST00000330943 PHKG2P15735 406 aa16.52■□□□□ 0.24
SNX20-202ENST00000330943 MCM6Q14566 821 aa16.52■□□□□ 0.24
SNX20-202ENST00000330943 MICU3Q86XE3 530 aa16.52■□□□□ 0.24
SNX20-202ENST00000330943 C10orf67Q8IYJ2 551 aa16.52■□□□□ 0.24
SNX20-202ENST00000330943 SLIT3O75094 1523 aa16.52■□□□□ 0.24
SNX20-202ENST00000330943 SOWAHDA6NJG2 315 aa16.52■□□□□ 0.24
SNX20-202ENST00000330943 ADORA1P30542 326 aa16.52■□□□□ 0.24
SNX20-202ENST00000330943 TRDNQ13061 729 aa16.52■□□□□ 0.24
SNX20-202ENST00000330943 BRD3Q15059 726 aa16.52■□□□□ 0.24
SNX20-202ENST00000330943 GOLGA5Q8TBA6 731 aa16.52■□□□□ 0.24
SNX20-202ENST00000330943 RASSF4Q9H2L5 321 aa16.52■□□□□ 0.24
SNX20-202ENST00000330943 RAI14Q9P0K7 980 aa16.52■□□□□ 0.24
SNX20-202ENST00000330943 ANGEL1Q9UNK9 670 aaKnown RBP16.52■□□□□ 0.24
SNX20-202ENST00000330943 TRIM66O15016 1216 aa16.52■□□□□ 0.23
SNX20-202ENST00000330943 CDKL5O76039 1030 aa16.52■□□□□ 0.23
SNX20-202ENST00000330943 CCDC175P0C221 793 aa16.52■□□□□ 0.23
SNX20-202ENST00000330943 TRIM29Q14134 588 aa16.52■□□□□ 0.23
SNX20-202ENST00000330943 ZFP91Q96JP5 570 aaPredicted RBP16.52■□□□□ 0.23
SNX20-202ENST00000330943 TMEM94Q12767 1356 aa16.52■□□□□ 0.23
SNX20-202ENST00000330943 SCN11AQ9UI33 1791 aa16.51■□□□□ 0.23
SNX20-202ENST00000330943 MYO1CO00159 1063 aa16.51■□□□□ 0.23
SNX20-202ENST00000330943 ZFYP08048 801 aaPredicted RBP16.51■□□□□ 0.23
SNX20-202ENST00000330943 ZNF18P17022 549 aa16.51■□□□□ 0.23
SNX20-202ENST00000330943 POSTNQ15063 836 aa16.51■□□□□ 0.23
SNX20-202ENST00000330943 SRGAP1Q7Z6B7 1085 aa16.51■□□□□ 0.23
SNX20-202ENST00000330943 APPBP2Q92624 585 aa16.51■□□□□ 0.23
SNX20-202ENST00000330943 PDE11AQ9HCR9 933 aa16.51■□□□□ 0.23
SNX20-202ENST00000330943 CWC25Q9NXE8 425 aaPredicted RBP16.51■□□□□ 0.23
SNX20-202ENST00000330943 VPS18Q9P253 973 aa16.51■□□□□ 0.23
SNX20-202ENST00000330943 HOOK1Q9UJC3 728 aaKnown RBP16.51■□□□□ 0.23
SNX20-202ENST00000330943 SPEF2Q9C093 1822 aa16.51■□□□□ 0.23
SNX20-202ENST00000330943 MAP2K7O14733 419 aa16.51■□□□□ 0.23
SNX20-202ENST00000330943 GPAA1O43292 621 aa16.51■□□□□ 0.23
SNX20-202ENST00000330943 PRR29P0C7W0 189 aa16.51■□□□□ 0.23
SNX20-202ENST00000330943 SCARF1Q14162 830 aa16.51■□□□□ 0.23
SNX20-202ENST00000330943 CPLX2Q6PUV4 134 aaKnown RBP16.51■□□□□ 0.23
SNX20-202ENST00000330943 KRI1Q8N9T8 703 aaKnown RBP16.51■□□□□ 0.23
SNX20-202ENST00000330943 NKX2-3Q8TAU0 364 aa16.51■□□□□ 0.23
SNX20-202ENST00000330943 IPO4Q8TEX9 1081 aaKnown RBP16.51■□□□□ 0.23
SNX20-202ENST00000330943 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.51■□□□□ 0.23
SNX20-202ENST00000330943 SAMSN1Q9NSI8 373 aaKnown RBP16.51■□□□□ 0.23
SNX20-202ENST00000330943 CEP126Q9P2H0 1117 aa16.51■□□□□ 0.23
SNX20-202ENST00000330943 TNNT3P45378 269 aaPredicted RBP16.5■□□□□ 0.23
SNX20-202ENST00000330943 MDM2Q00987 491 aaPredicted RBP16.5■□□□□ 0.23
SNX20-202ENST00000330943 PI16Q6UXB8 463 aa16.5■□□□□ 0.23
SNX20-202ENST00000330943 CYB5R4Q7L1T6 521 aa16.5■□□□□ 0.23
SNX20-202ENST00000330943 GRAMD1CQ8IYS0 662 aa16.5■□□□□ 0.23
SNX20-202ENST00000330943 PLCD3Q8N3E9 789 aa16.5■□□□□ 0.23
SNX20-202ENST00000330943 SENP2Q9HC62 589 aa16.5■□□□□ 0.23
SNX20-202ENST00000330943 PSD3Q9NYI0 1048 aa16.5■□□□□ 0.23
SNX20-202ENST00000330943 ZNF330Q9Y3S2 320 aaPredicted RBP16.5■□□□□ 0.23
SNX20-202ENST00000330943 CAMTA1Q9Y6Y1 1673 aa16.5■□□□□ 0.23
SNX20-202ENST00000330943 A0A0U1RQJ8 604 aa16.5■□□□□ 0.23
SNX20-202ENST00000330943 UBE2Q2LH0YL09 131 aa16.5■□□□□ 0.23
SNX20-202ENST00000330943 ZAP70P43403 619 aa16.5■□□□□ 0.23
SNX20-202ENST00000330943 APOA5Q6Q788 366 aa16.5■□□□□ 0.23
SNX20-202ENST00000330943 ATRIPQ8WXE1 791 aa16.5■□□□□ 0.23
SNX20-202ENST00000330943 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.5■□□□□ 0.23
SNX20-202ENST00000330943 ANKZF1Q9H8Y5 726 aa16.5■□□□□ 0.23
SNX20-202ENST00000330943 DDX60Q8IY21 1712 aaKnown RBP16.5■□□□□ 0.23
SNX20-202ENST00000330943 NUTM2AQ8IVF1 878 aaPredicted RBP16.49■□□□□ 0.23
SNX20-202ENST00000330943 ENOX1Q8TC92 643 aaKnown RBP16.49■□□□□ 0.23
SNX20-202ENST00000330943 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.49■□□□□ 0.23
SNX20-202ENST00000330943 TEX13AQ9BXU3 409 aaPredicted RBP16.49■□□□□ 0.23
SNX20-202ENST00000330943 LMTK3Q96Q04 1460 aa16.49■□□□□ 0.23
SNX20-202ENST00000330943 AKR1B15C9JRZ8 316 aaPredicted RBP16.49■□□□□ 0.23
SNX20-202ENST00000330943 POLR2DO15514 142 aaKnown RBP16.49■□□□□ 0.23
SNX20-202ENST00000330943 ACTN2P35609 894 aa16.49■□□□□ 0.23
SNX20-202ENST00000330943 IARSP41252 1262 aaKnown RBP16.49■□□□□ 0.23
SNX20-202ENST00000330943 GRIN1Q05586 938 aa16.49■□□□□ 0.23
SNX20-202ENST00000330943 STK11IPQ8N1F8 1099 aa16.49■□□□□ 0.23
SNX20-202ENST00000330943 MLKLQ8NB16 471 aa16.49■□□□□ 0.23
SNX20-202ENST00000330943 CPLX3Q8WVH0 158 aa16.49■□□□□ 0.23
SNX20-202ENST00000330943 XAGE2Q96GT9 111 aa16.49■□□□□ 0.23
SNX20-202ENST00000330943 MYL10Q9BUA6 226 aa16.49■□□□□ 0.23
SNX20-202ENST00000330943 NBPF3Q9H094 633 aa16.49■□□□□ 0.23
SNX20-202ENST00000330943 RSPH14Q9UHP6 348 aa16.49■□□□□ 0.23
SNX20-202ENST00000330943 SERTAD1Q9UHV2 236 aa16.49■□□□□ 0.23
SNX20-202ENST00000330943 DACH1Q9UI36 760 aa16.49■□□□□ 0.23
SNX20-202ENST00000330943 WDR19Q8NEZ3 1342 aa16.49■□□□□ 0.23
SNX20-202ENST00000330943 TATP17735 454 aaPredicted RBP16.49■□□□□ 0.23
SNX20-202ENST00000330943 BEND6Q5SZJ8 279 aaPredicted RBP16.49■□□□□ 0.23
SNX20-202ENST00000330943 TTLL7Q6ZT98 887 aa16.49■□□□□ 0.23
SNX20-202ENST00000330943 TBC1D10CQ8IV04 446 aa16.49■□□□□ 0.23
SNX20-202ENST00000330943 PNKPQ96T60 521 aa16.49■□□□□ 0.23
SNX20-202ENST00000330943 RGPD5Q99666 1765 aa16.48■□□□□ 0.23
SNX20-202ENST00000330943 SH2B2O14492 632 aaPredicted RBP16.48■□□□□ 0.23
SNX20-202ENST00000330943 KIF5CO60282 957 aa16.48■□□□□ 0.23
SNX20-202ENST00000330943 RAD9BQ6WBX8 426 aa16.48■□□□□ 0.23
SNX20-202ENST00000330943 LEKR1Q6ZMV7 388 aa16.48■□□□□ 0.23
SNX20-202ENST00000330943 NFXL1Q6ZNB6 911 aa16.48■□□□□ 0.23
SNX20-202ENST00000330943 SUGCTQ9HAC7 445 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms