RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 BECN1Q14457 450 aa19.77■□□□□ 0.76
PDLIM1-201ENST00000329399 SUPT20HL1Q3ZLR7 823 aa19.77■□□□□ 0.76
PDLIM1-201ENST00000329399 TSHZ3Q63HK5 1081 aa19.77■□□□□ 0.76
PDLIM1-201ENST00000329399 FAM83AQ86UY5 434 aa19.77■□□□□ 0.76
PDLIM1-201ENST00000329399 RUFY2Q8WXA3 655 aa19.77■□□□□ 0.76
PDLIM1-201ENST00000329399 RILPL2Q969X0 211 aa19.77■□□□□ 0.76
PDLIM1-201ENST00000329399 BOLA2Q9H3K6 86 aa19.77■□□□□ 0.76
PDLIM1-201ENST00000329399 SLC10A3P09131 477 aa19.76■□□□□ 0.75
PDLIM1-201ENST00000329399 MAP3K11Q16584 847 aa19.76■□□□□ 0.75
PDLIM1-201ENST00000329399 SLFNL1Q499Z3 407 aa19.76■□□□□ 0.75
PDLIM1-201ENST00000329399 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.76■□□□□ 0.75
PDLIM1-201ENST00000329399 FAM151AQ8WW52 585 aa19.76■□□□□ 0.75
PDLIM1-201ENST00000329399 DAXXQ9UER7 740 aaPredicted RBP19.76■□□□□ 0.75
PDLIM1-201ENST00000329399 FOXN1O15353 648 aa19.75■□□□□ 0.75
PDLIM1-201ENST00000329399 IDH1O75874 414 aaKnown RBP19.75■□□□□ 0.75
PDLIM1-201ENST00000329399 CHGBP05060 677 aa19.75■□□□□ 0.75
PDLIM1-201ENST00000329399 CHMLP26374 656 aa19.75■□□□□ 0.75
PDLIM1-201ENST00000329399 TNNI2P48788 182 aa19.75■□□□□ 0.75
PDLIM1-201ENST00000329399 KIF23Q02241 960 aaPredicted RBP19.75■□□□□ 0.75
PDLIM1-201ENST00000329399 MKRN3Q13064 507 aaKnown RBP19.75■□□□□ 0.75
PDLIM1-201ENST00000329399 NAA16Q6N069 864 aaPredicted RBP19.75■□□□□ 0.75
PDLIM1-201ENST00000329399 MIGA2Q7L4E1 593 aa19.75■□□□□ 0.75
PDLIM1-201ENST00000329399 ARMC9Q7Z3E5 817 aa19.75■□□□□ 0.75
PDLIM1-201ENST00000329399 IDI2Q9BXS1 227 aa19.75■□□□□ 0.75
PDLIM1-201ENST00000329399 TMOD2Q9NZR1 351 aa19.75■□□□□ 0.75
PDLIM1-201ENST00000329399 RFX7Q2KHR2 1363 aa19.75■□□□□ 0.75
PDLIM1-201ENST00000329399 AK9Q5TCS8 1911 aa19.75■□□□□ 0.75
PDLIM1-201ENST00000329399 MAP2K2P36507 400 aa19.74■□□□□ 0.75
PDLIM1-201ENST00000329399 DYNLL1P63167 89 aaKnown RBP19.74■□□□□ 0.75
PDLIM1-201ENST00000329399 SH3RF3Q8TEJ3 882 aaPredicted RBP19.74■□□□□ 0.75
PDLIM1-201ENST00000329399 DNAJC2Q99543 621 aaKnown RBP19.74■□□□□ 0.75
PDLIM1-201ENST00000329399 DDTLA6NHG4 134 aaPredicted RBP19.73■□□□□ 0.75
PDLIM1-201ENST00000329399 GOLIM4O00461 696 aa19.73■□□□□ 0.75
PDLIM1-201ENST00000329399 PPP1R12BO60237 982 aaPredicted RBP19.73■□□□□ 0.75
PDLIM1-201ENST00000329399 PICALMQ13492 652 aa19.73■□□□□ 0.75
PDLIM1-201ENST00000329399 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.73■□□□□ 0.75
PDLIM1-201ENST00000329399 SLF2Q8IX21 1173 aa19.73■□□□□ 0.75
PDLIM1-201ENST00000329399 CCDC102AQ96A19 550 aa19.73■□□□□ 0.75
PDLIM1-201ENST00000329399 ESYT1Q9BSJ8 1104 aa19.73■□□□□ 0.75
PDLIM1-201ENST00000329399 AATFQ9NY61 560 aaKnown RBP eCLIP19.73■□□□□ 0.75
PDLIM1-201ENST00000329399 LDHCP07864 332 aa19.73■□□□□ 0.75
PDLIM1-201ENST00000329399 CYP7A1P22680 504 aa19.73■□□□□ 0.75
PDLIM1-201ENST00000329399 GJA5P36382 358 aa19.73■□□□□ 0.75
PDLIM1-201ENST00000329399 GSTO1P78417 241 aa19.73■□□□□ 0.75
PDLIM1-201ENST00000329399 NOGQ13253 232 aa19.73■□□□□ 0.75
PDLIM1-201ENST00000329399 MAGEB6Q8N7X4 407 aa19.73■□□□□ 0.75
PDLIM1-201ENST00000329399 CNKSR2Q8WXI2 1034 aa19.73■□□□□ 0.75
PDLIM1-201ENST00000329399 CSRNP1Q96S65 589 aa19.73■□□□□ 0.75
PDLIM1-201ENST00000329399 MIGA1Q8NAN2 632 aa19.72■□□□□ 0.75
PDLIM1-201ENST00000329399 USP26Q9BXU7 913 aa19.72■□□□□ 0.75
PDLIM1-201ENST00000329399 TSKSQ9UJT2 592 aa19.72■□□□□ 0.75
PDLIM1-201ENST00000329399 THSD7BQ9C0I4 1608 aa19.71■□□□□ 0.75
PDLIM1-201ENST00000329399 MCCP23508 829 aa19.71■□□□□ 0.75
PDLIM1-201ENST00000329399 PPP4CP60510 307 aa19.71■□□□□ 0.75
PDLIM1-201ENST00000329399 LRRFIP1Q32MZ4 808 aaKnown RBP19.71■□□□□ 0.75
PDLIM1-201ENST00000329399 SLC10A4Q96EP9 437 aa19.71■□□□□ 0.75
PDLIM1-201ENST00000329399 HAUS7Q99871 368 aa19.71■□□□□ 0.75
PDLIM1-201ENST00000329399 ATRNL1Q5VV63 1379 aa19.7■□□□□ 0.74
PDLIM1-201ENST00000329399 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.7■□□□□ 0.745e-14■■■□□ 14.8
PDLIM1-201ENST00000329399 ZKSCAN4Q969J2 545 aaPredicted RBP19.7■□□□□ 0.74
PDLIM1-201ENST00000329399 RAD50Q92878 1312 aa19.7■□□□□ 0.74
PDLIM1-201ENST00000329399 ENTPD3O75355 529 aa19.69■□□□□ 0.74
PDLIM1-201ENST00000329399 IREB2P48200 963 aaKnown RBP19.69■□□□□ 0.74
PDLIM1-201ENST00000329399 MAP2K1Q02750 393 aaPredicted RBP19.69■□□□□ 0.74
PDLIM1-201ENST00000329399 VGLL4Q14135 290 aa19.69■□□□□ 0.74
PDLIM1-201ENST00000329399 SPRYD7Q5W111 196 aa19.69■□□□□ 0.74
PDLIM1-201ENST00000329399 TEX11Q8IYF3 940 aa19.69■□□□□ 0.74
PDLIM1-201ENST00000329399 ELP3Q9H9T3 547 aa19.69■□□□□ 0.74
PDLIM1-201ENST00000329399 DIAPH3Q9NSV4 1193 aa19.69■□□□□ 0.74
PDLIM1-201ENST00000329399 PAG1Q9NWQ8 432 aa19.69■□□□□ 0.74
PDLIM1-201ENST00000329399 TCRBV5S4A2TA0A5A2 114 aa19.68■□□□□ 0.74
PDLIM1-201ENST00000329399 PDE6AP16499 860 aa19.68■□□□□ 0.74
PDLIM1-201ENST00000329399 INPP5BP32019 993 aa19.68■□□□□ 0.74
PDLIM1-201ENST00000329399 MAP3K9P80192 1104 aa19.68■□□□□ 0.74
PDLIM1-201ENST00000329399 SLC9C2Q5TAH2 1124 aa19.68■□□□□ 0.74
PDLIM1-201ENST00000329399 RPAP1Q9BWH6 1393 aaPredicted RBP19.68■□□□□ 0.74
PDLIM1-201ENST00000329399 ANAPC15P60006 121 aa19.67■□□□□ 0.74
PDLIM1-201ENST00000329399 MAP3K12Q12852 859 aa19.67■□□□□ 0.74
PDLIM1-201ENST00000329399 ANKRD13AQ8IZ07 590 aa19.67■□□□□ 0.74
PDLIM1-201ENST00000329399 TGFBRAP1Q8WUH2 860 aa19.67■□□□□ 0.74
PDLIM1-201ENST00000329399 WNK4Q96J92 1243 aa19.67■□□□□ 0.74
PDLIM1-201ENST00000329399 WRNIP1Q96S55 665 aa19.67■□□□□ 0.74
PDLIM1-201ENST00000329399 FAM196BA6NMK8 535 aa19.67■□□□□ 0.74
PDLIM1-201ENST00000329399 PHF20L1A8MW92 1017 aa19.67■□□□□ 0.74
PDLIM1-201ENST00000329399 SGSM2O43147 1006 aa19.67■□□□□ 0.74
PDLIM1-201ENST00000329399 MAP4K4O95819 1239 aaPredicted RBP19.67■□□□□ 0.74
PDLIM1-201ENST00000329399 COL13A1Q5TAT6 717 aaPredicted RBP19.67■□□□□ 0.74
PDLIM1-201ENST00000329399 KIAA1211Q6ZU35 1233 aa19.67■□□□□ 0.74
PDLIM1-201ENST00000329399 MAPKAPK5Q8IW41 473 aa19.67■□□□□ 0.74
PDLIM1-201ENST00000329399 ZSCAN29Q8IWY8 852 aaPredicted RBP19.67■□□□□ 0.74
PDLIM1-201ENST00000329399 SNX21Q969T3 373 aa19.67■□□□□ 0.74
PDLIM1-201ENST00000329399 ZNF112Q9UJU3 913 aa19.67■□□□□ 0.74
PDLIM1-201ENST00000329399 SNCAIPQ9Y6H5 919 aa19.67■□□□□ 0.74
PDLIM1-201ENST00000329399 OTOFQ9HC10 1997 aa19.67■□□□□ 0.74
PDLIM1-201ENST00000329399 ZNF532Q9HCE3 1301 aa19.66■□□□□ 0.74
PDLIM1-201ENST00000329399 DOCK2Q92608 1830 aa19.66■□□□□ 0.74
PDLIM1-201ENST00000329399 HSPA8P11142 646 aaKnown RBP19.66■□□□□ 0.74
PDLIM1-201ENST00000329399 LBX1P52954 281 aa19.66■□□□□ 0.74
PDLIM1-201ENST00000329399 MAP3K10Q02779 954 aa19.66■□□□□ 0.74
PDLIM1-201ENST00000329399 TTF1Q15361 905 aaPredicted RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms