RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 LONRF3Q496Y0 759 aa16.2■□□□□ 0.18
ATP2C1-201ENST00000328560 HOMER1Q86YM7 354 aa16.2■□□□□ 0.18
ATP2C1-201ENST00000328560 FOXN1O15353 648 aa16.2■□□□□ 0.18
ATP2C1-201ENST00000328560 NRDCO43847 1150 aa16.2■□□□□ 0.18
ATP2C1-201ENST00000328560 SUSD4Q5VX71 490 aa16.2■□□□□ 0.18
ATP2C1-201ENST00000328560 ARMCX5Q6P1M9 558 aa16.2■□□□□ 0.18
ATP2C1-201ENST00000328560 LCORLQ8N3X6 602 aa16.2■□□□□ 0.18
ATP2C1-201ENST00000328560 ANKRD7Q92527 254 aa16.2■□□□□ 0.18
ATP2C1-201ENST00000328560 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.2■□□□□ 0.18
ATP2C1-201ENST00000328560 TCRBV5S4A2TA0A5A2 114 aa16.19■□□□□ 0.18
ATP2C1-201ENST00000328560 ERICH2A1L162 156 aa16.19■□□□□ 0.18
ATP2C1-201ENST00000328560 ATP6V1AP38606 617 aa16.19■□□□□ 0.18
ATP2C1-201ENST00000328560 UBASH3AP57075 661 aa16.19■□□□□ 0.18
ATP2C1-201ENST00000328560 OLFM4Q6UX06 510 aa16.19■□□□□ 0.18
ATP2C1-201ENST00000328560 KIF18AQ8NI77 898 aa16.19■□□□□ 0.18
ATP2C1-201ENST00000328560 FAM217BQ9NTX9 383 aaPredicted RBP16.19■□□□□ 0.18
ATP2C1-201ENST00000328560 NUTM2BA6NNL0 878 aaPredicted RBP16.19■□□□□ 0.18
ATP2C1-201ENST00000328560 NUTM2EB1AL46 878 aaPredicted RBP16.19■□□□□ 0.18
ATP2C1-201ENST00000328560 IGSF3O75054 1194 aa16.19■□□□□ 0.18
ATP2C1-201ENST00000328560 NUTM2AQ8IVF1 878 aaPredicted RBP16.19■□□□□ 0.18
ATP2C1-201ENST00000328560 KCNH3Q9ULD8 1083 aa16.19■□□□□ 0.18
ATP2C1-201ENST00000328560 NUP188Q5SRE5 1749 aa16.18■□□□□ 0.18
ATP2C1-201ENST00000328560 WDR19Q8NEZ3 1342 aa16.18■□□□□ 0.18
ATP2C1-201ENST00000328560 GTF2E1P29083 439 aaPredicted RBP16.18■□□□□ 0.18
ATP2C1-201ENST00000328560 ARID4AP29374 1257 aaPredicted RBP16.18■□□□□ 0.18
ATP2C1-201ENST00000328560 NCAPHQ15003 741 aa16.18■□□□□ 0.18
ATP2C1-201ENST00000328560 AKNAD1Q5T1N1 836 aa16.18■□□□□ 0.18
ATP2C1-201ENST00000328560 DIS3L2Q8IYB7 885 aaKnown RBP16.18■□□□□ 0.18
ATP2C1-201ENST00000328560 TRIM22Q8IYM9 498 aa16.18■□□□□ 0.18
ATP2C1-201ENST00000328560 DPF2Q92785 391 aa16.18■□□□□ 0.18
ATP2C1-201ENST00000328560 TACC3Q9Y6A5 838 aa16.18■□□□□ 0.18
ATP2C1-201ENST00000328560 ABCC12Q96J65 1359 aa16.18■□□□□ 0.18
ATP2C1-201ENST00000328560 hCG_1642624A0A1W2PR95 340 aa16.18■□□□□ 0.18
ATP2C1-201ENST00000328560 WTAPQ15007 396 aa16.18■□□□□ 0.18
ATP2C1-201ENST00000328560 NTRK3Q16288 839 aa16.18■□□□□ 0.18
ATP2C1-201ENST00000328560 RTN1Q16799 776 aa16.18■□□□□ 0.18
ATP2C1-201ENST00000328560 NACAP1Q9BZK3 213 aa16.18■□□□□ 0.18
ATP2C1-201ENST00000328560 IL6STP40189 918 aaPredicted RBP16.18■□□□□ 0.18
ATP2C1-201ENST00000328560 SART3Q15020 963 aaKnown RBP16.18■□□□□ 0.18
ATP2C1-201ENST00000328560 PTPAQ15257 358 aa16.18■□□□□ 0.18
ATP2C1-201ENST00000328560 SYT10Q6XYQ8 523 aa16.18■□□□□ 0.18
ATP2C1-201ENST00000328560 PCDHA5Q9Y5H7 936 aa16.18■□□□□ 0.18
ATP2C1-201ENST00000328560 NWD2Q9ULI1 1742 aa16.17■□□□□ 0.18
ATP2C1-201ENST00000328560 GSG1L2A8MUP6 293 aa16.17■□□□□ 0.18
ATP2C1-201ENST00000328560 NR5A1Q13285 461 aa16.17■□□□□ 0.18
ATP2C1-201ENST00000328560 SDR42E1Q8WUS8 393 aa16.17■□□□□ 0.18
ATP2C1-201ENST00000328560 MROH5Q6ZUA9 1318 aa16.17■□□□□ 0.18
ATP2C1-201ENST00000328560 IGHMBP2P38935 993 aaKnown RBP16.17■□□□□ 0.18
ATP2C1-201ENST00000328560 GRIN1Q05586 938 aa16.17■□□□□ 0.18
ATP2C1-201ENST00000328560 ZNF827Q17R98 1081 aa16.17■□□□□ 0.18
ATP2C1-201ENST00000328560 FAM177A1Q8N128 213 aaPredicted RBP16.17■□□□□ 0.18
ATP2C1-201ENST00000328560 FANCLQ9NW38 375 aa16.17■□□□□ 0.18
ATP2C1-201ENST00000328560 E4F1Q66K89 784 aaPredicted RBP16.17■□□□□ 0.18
ATP2C1-201ENST00000328560 NYAP1Q6ZVC0 841 aa16.17■□□□□ 0.18
ATP2C1-201ENST00000328560 CCDC150Q8NCX0 1101 aa16.17■□□□□ 0.18
ATP2C1-201ENST00000328560 ZNF512BQ96KM6 892 aaPredicted RBP16.17■□□□□ 0.18
ATP2C1-201ENST00000328560 OSBPL5Q9H0X9 879 aaPredicted RBP16.17■□□□□ 0.18
ATP2C1-201ENST00000328560 RAI14Q9P0K7 980 aa16.17■□□□□ 0.18
ATP2C1-201ENST00000328560 IMPACTQ9P2X3 320 aa16.17■□□□□ 0.18
ATP2C1-201ENST00000328560 PARP4Q9UKK3 1724 aaKnown RBP16.16■□□□□ 0.18
ATP2C1-201ENST00000328560 SMIM22K7EJ46 135 aa16.16■□□□□ 0.18
ATP2C1-201ENST00000328560 CYP7A1P22680 504 aa16.16■□□□□ 0.18
ATP2C1-201ENST00000328560 MYL5Q02045 173 aa16.16■□□□□ 0.18
ATP2C1-201ENST00000328560 NOSTRINQ8IVI9 506 aa16.16■□□□□ 0.18
ATP2C1-201ENST00000328560 MAP3K14Q99558 947 aa16.16■□□□□ 0.18
ATP2C1-201ENST00000328560 UBAC1Q9BSL1 405 aa16.16■□□□□ 0.18
ATP2C1-201ENST00000328560 PPP6R2O75170 966 aa16.16■□□□□ 0.18
ATP2C1-201ENST00000328560 CDK11BP21127 795 aaKnown RBP16.16■□□□□ 0.18
ATP2C1-201ENST00000328560 METTL16Q86W50 562 aaKnown RBP16.16■□□□□ 0.18
ATP2C1-201ENST00000328560 GRAMD1CQ8IYS0 662 aa16.16■□□□□ 0.18
ATP2C1-201ENST00000328560 KRI1Q8N9T8 703 aaKnown RBP16.16■□□□□ 0.18
ATP2C1-201ENST00000328560 KRT23Q9C075 422 aa16.16■□□□□ 0.18
ATP2C1-201ENST00000328560 ERVV-1B6SEH8 477 aa16.15■□□□□ 0.18
ATP2C1-201ENST00000328560 FOXP4Q8IVH2 680 aaPredicted RBP16.15■□□□□ 0.18
ATP2C1-201ENST00000328560 BPIFA3Q9BQP9 254 aa16.15■□□□□ 0.18
ATP2C1-201ENST00000328560 UTP14AQ9BVJ6 771 aaKnown RBP16.15■□□□□ 0.18
ATP2C1-201ENST00000328560 NIP7Q9Y221 180 aaKnown RBP eCLIP16.15■□□□□ 0.18
ATP2C1-201ENST00000328560 TMEM232C9JQI7 657 aa16.15■□□□□ 0.18
ATP2C1-201ENST00000328560 POLR2DO15514 142 aaKnown RBP16.15■□□□□ 0.18
ATP2C1-201ENST00000328560 CUTAO60888 179 aa16.15■□□□□ 0.18
ATP2C1-201ENST00000328560 FGFR2P21802 821 aa16.15■□□□□ 0.18
ATP2C1-201ENST00000328560 KRBA2Q6ZNG9 492 aa16.15■□□□□ 0.18
ATP2C1-201ENST00000328560 SGMS1Q86VZ5 419 aa16.15■□□□□ 0.18
ATP2C1-201ENST00000328560 SMAP1Q8IYB5 467 aaPredicted RBP16.15■□□□□ 0.18
ATP2C1-201ENST00000328560 PPP1R13BQ96KQ4 1090 aa16.15■□□□□ 0.18
ATP2C1-201ENST00000328560 CNNM2Q9H8M5 875 aa16.15■□□□□ 0.18
ATP2C1-201ENST00000328560 ELF2Q15723 593 aa16.15■□□□□ 0.18
ATP2C1-201ENST00000328560 RESP18Q5W5W9 173 aa16.15■□□□□ 0.18
ATP2C1-201ENST00000328560 ZHX1Q9UKY1 873 aaPredicted RBP16.15■□□□□ 0.18
ATP2C1-201ENST00000328560 WTIPA6NIX2 430 aaPredicted RBP16.14■□□□□ 0.17
ATP2C1-201ENST00000328560 PRDM1O75626 825 aa16.14■□□□□ 0.17
ATP2C1-201ENST00000328560 TRMT44Q8IYL2 757 aaKnown RBP16.14■□□□□ 0.17
ATP2C1-201ENST00000328560 ZNF34Q8IZ26 560 aa16.14■□□□□ 0.17
ATP2C1-201ENST00000328560 CABP5Q9NP86 173 aa16.14■□□□□ 0.17
ATP2C1-201ENST00000328560 HPSEQ9Y251 543 aa16.14■□□□□ 0.17
ATP2C1-201ENST00000328560 FMNL1O95466 1100 aaPredicted RBP16.14■□□□□ 0.17
ATP2C1-201ENST00000328560 TOP1P11387 765 aaKnown RBP16.14■□□□□ 0.17
ATP2C1-201ENST00000328560 LIFRP42702 1097 aa16.14■□□□□ 0.17
ATP2C1-201ENST00000328560 AKAP17AQ02040 695 aaKnown RBP16.14■□□□□ 0.17
ATP2C1-201ENST00000328560 OXER1Q8TDS5 423 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms