RNA–Protein interactions for RNA: ENST00000323833.12

TSFM-201, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSFM, Length 1,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-201ENST00000323833 LDLRAD1Q5T700 205 aa18.76■□□□□ 0.59
TSFM-201ENST00000323833 TEX11Q8IYF3 940 aa18.76■□□□□ 0.59
TSFM-201ENST00000323833 LNPKQ9C0E8 428 aa18.76■□□□□ 0.59
TSFM-201ENST00000323833 SIPA1L1O43166 1804 aa18.76■□□□□ 0.59
TSFM-201ENST00000323833 PCNTO95613 3336 aa18.75■□□□□ 0.59
TSFM-201ENST00000323833 MAP4K4O95819 1239 aaPredicted RBP18.75■□□□□ 0.59
TSFM-201ENST00000323833 IREB2P48200 963 aaKnown RBP18.75■□□□□ 0.59
TSFM-201ENST00000323833 SLFNL1Q499Z3 407 aa18.75■□□□□ 0.59
TSFM-201ENST00000323833 MIGA2Q7L4E1 593 aa18.75■□□□□ 0.59
TSFM-201ENST00000323833 SH3BP5LQ7L8J4 393 aa18.75■□□□□ 0.59
TSFM-201ENST00000323833 RASAL3Q86YV0 1011 aa18.75■□□□□ 0.59
TSFM-201ENST00000323833 PI4K2BQ8TCG2 481 aa18.75■□□□□ 0.59
TSFM-201ENST00000323833 CCDC102AQ96A19 550 aa18.75■□□□□ 0.59
TSFM-201ENST00000323833 ZIC5Q96T25 663 aa18.75■□□□□ 0.59
TSFM-201ENST00000323833 NAV1Q8NEY1 1877 aa18.75■□□□□ 0.59
TSFM-201ENST00000323833 ZNF532Q9HCE3 1301 aa18.74■□□□□ 0.59
TSFM-201ENST00000323833 LAMB1P07942 1786 aa18.74■□□□□ 0.59
TSFM-201ENST00000323833 TCRBV5S4A2TA0A5A2 114 aa18.74■□□□□ 0.59
TSFM-201ENST00000323833 DDTLA6NHG4 134 aaPredicted RBP18.74■□□□□ 0.59
TSFM-201ENST00000323833 CHGBP05060 677 aa18.74■□□□□ 0.59
TSFM-201ENST00000323833 SLC10A3P09131 477 aa18.74■□□□□ 0.59
TSFM-201ENST00000323833 PLCG2P16885 1265 aa18.74■□□□□ 0.59
TSFM-201ENST00000323833 ZSCAN29Q8IWY8 852 aaPredicted RBP18.74■□□□□ 0.59
TSFM-201ENST00000323833 CLMNQ96JQ2 1002 aa18.74■□□□□ 0.59
TSFM-201ENST00000323833 BAZ2AQ9UIF9 1905 aaKnown RBP18.74■□□□□ 0.59
TSFM-201ENST00000323833 ATAD5Q96QE3 1844 aa18.74■□□□□ 0.59
TSFM-201ENST00000323833 ERC2O15083 957 aa18.73■□□□□ 0.59
TSFM-201ENST00000323833 NUCB1Q02818 461 aa18.73■□□□□ 0.59
TSFM-201ENST00000323833 CHD1LQ86WJ1 897 aa18.73■□□□□ 0.59
TSFM-201ENST00000323833 TGFBRAP1Q8WUH2 860 aa18.73■□□□□ 0.59
TSFM-201ENST00000323833 HOOK2Q96ED9 719 aa18.73■□□□□ 0.59
TSFM-201ENST00000323833 OSBPL5Q9H0X9 879 aaPredicted RBP18.73■□□□□ 0.59
TSFM-201ENST00000323833 GLRX3O76003 335 aaKnown RBP18.72■□□□□ 0.59
TSFM-201ENST00000323833 SLURP2P0DP57 97 aa18.72■□□□□ 0.59
TSFM-201ENST00000323833 ADD2P35612 726 aa18.72■□□□□ 0.59
TSFM-201ENST00000323833 MAP2K2P36507 400 aa18.72■□□□□ 0.59
TSFM-201ENST00000323833 MKRN3Q13064 507 aaKnown RBP18.72■□□□□ 0.59
TSFM-201ENST00000323833 NOGQ13253 232 aa18.72■□□□□ 0.59
TSFM-201ENST00000323833 DCAF15Q66K64 600 aa18.72■□□□□ 0.59
TSFM-201ENST00000323833 TMED8Q6PL24 325 aaPredicted RBP18.72■□□□□ 0.59
TSFM-201ENST00000323833 MAPKAPK5Q8IW41 473 aa18.72■□□□□ 0.59
TSFM-201ENST00000323833 CSRNP1Q96S65 589 aa18.72■□□□□ 0.59
TSFM-201ENST00000323833 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.72■□□□□ 0.59
TSFM-201ENST00000323833 MAGEB6P1A0A0J9YX57 407 aa18.71■□□□□ 0.59
TSFM-201ENST00000323833 PDE1AP54750 535 aa18.71■□□□□ 0.59
TSFM-201ENST00000323833 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.71■□□□□ 0.59
TSFM-201ENST00000323833 ANKRD13AQ8IZ07 590 aa18.71■□□□□ 0.59
TSFM-201ENST00000323833 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.71■□□□□ 0.59
TSFM-201ENST00000323833 SLC10A4Q96EP9 437 aa18.71■□□□□ 0.59
TSFM-201ENST00000323833 RIOK1Q9BRS2 568 aaKnown RBP18.71■□□□□ 0.59
TSFM-201ENST00000323833 ZNF341Q9BYN7 854 aa18.71■□□□□ 0.59
TSFM-201ENST00000323833 STAP2Q9UGK3 403 aa18.71■□□□□ 0.59
TSFM-201ENST00000323833 DDX60LQ5H9U9 1706 aaKnown RBP18.71■□□□□ 0.59
TSFM-201ENST00000323833 DOCK1Q14185 1865 aa18.71■□□□□ 0.59
TSFM-201ENST00000323833 FLT1P17948 1338 aa18.71■□□□□ 0.59
TSFM-201ENST00000323833 ATRNL1Q5VV63 1379 aa18.7■□□□□ 0.58
TSFM-201ENST00000323833 MAP3K9P80192 1104 aa18.7■□□□□ 0.58
TSFM-201ENST00000323833 KIF23Q02241 960 aaPredicted RBP18.7■□□□□ 0.58
TSFM-201ENST00000323833 KBTBD3Q8NAB2 608 aa18.7■□□□□ 0.58
TSFM-201ENST00000323833 WRNIP1Q96S55 665 aa18.7■□□□□ 0.58
TSFM-201ENST00000323833 ELP3Q9H9T3 547 aa18.7■□□□□ 0.58
TSFM-201ENST00000323833 COL2A1P02458 1487 aaPredicted RBP18.7■□□□□ 0.58
TSFM-201ENST00000323833 UNCXA6NJT0 531 aa18.69■□□□□ 0.58
TSFM-201ENST00000323833 HSPA1AP0DMV8 641 aaKnown RBP18.69■□□□□ 0.58
TSFM-201ENST00000323833 HSPA1BP0DMV9 641 aaKnown RBP18.69■□□□□ 0.58
TSFM-201ENST00000323833 VGLL4Q14135 290 aa18.69■□□□□ 0.58
TSFM-201ENST00000323833 ZKSCAN4Q969J2 545 aaPredicted RBP18.69■□□□□ 0.58
TSFM-201ENST00000323833 MYH8P13535 1937 aa18.68■□□□□ 0.58
TSFM-201ENST00000323833 PHIPQ8WWQ0 1821 aa18.68■□□□□ 0.58
TSFM-201ENST00000323833 INPP5BP32019 993 aa18.68■□□□□ 0.58
TSFM-201ENST00000323833 USP5P45974 858 aa18.68■□□□□ 0.58
TSFM-201ENST00000323833 MAP2K1Q02750 393 aaPredicted RBP18.68■□□□□ 0.58
TSFM-201ENST00000323833 UBE3CQ15386 1083 aa18.68■□□□□ 0.58
TSFM-201ENST00000323833 SPRYD7Q5W111 196 aa18.68■□□□□ 0.58
TSFM-201ENST00000323833 ZSCAN25Q6NSZ9 544 aa18.68■□□□□ 0.58
TSFM-201ENST00000323833 CERS3Q8IU89 383 aa18.68■□□□□ 0.58
TSFM-201ENST00000323833 LCORLQ8N3X6 602 aa18.68■□□□□ 0.58
TSFM-201ENST00000323833 WNK4Q96J92 1243 aa18.68■□□□□ 0.58
TSFM-201ENST00000323833 ARMT1Q9H993 441 aa18.68■□□□□ 0.58
TSFM-201ENST00000323833 WBP1LQ9NX94 342 aa18.68■□□□□ 0.58
TSFM-201ENST00000323833 SAP30BPQ9UHR5 308 aaKnown RBP18.68■□□□□ 0.58
TSFM-201ENST00000323833 FAM196BA6NMK8 535 aa18.67■□□□□ 0.58
TSFM-201ENST00000323833 MBD4O95243 580 aa18.67■□□□□ 0.58
TSFM-201ENST00000323833 GJA5P36382 358 aa18.67■□□□□ 0.58
TSFM-201ENST00000323833 SLC4A8Q2Y0W8 1093 aa18.67■□□□□ 0.58
TSFM-201ENST00000323833 PLEKHM2Q8IWE5 1019 aa18.67■□□□□ 0.58
TSFM-201ENST00000323833 ZNF112Q9UJU3 913 aa18.67■□□□□ 0.58
TSFM-201ENST00000323833 PALD1Q9ULE6 856 aa18.67■□□□□ 0.58
TSFM-201ENST00000323833 CSADQ9Y600 493 aa18.67■□□□□ 0.58
TSFM-201ENST00000323833 SNCAIPQ9Y6H5 919 aa18.67■□□□□ 0.58
TSFM-201ENST00000323833 RNF113AO15541 343 aaKnown RBP18.66■□□□□ 0.58
TSFM-201ENST00000323833 MAP3K10Q02779 954 aa18.66■□□□□ 0.58
TSFM-201ENST00000323833 OPTNQ96CV9 577 aa18.66■□□□□ 0.58
TSFM-201ENST00000323833 FSD1Q9BTV5 496 aa18.66■□□□□ 0.58
TSFM-201ENST00000323833 CRNKL1Q9BZJ0 848 aaKnown RBP18.66■□□□□ 0.58
TSFM-201ENST00000323833 PUS7LQ9H0K6 701 aaKnown RBP18.66■□□□□ 0.58
TSFM-201ENST00000323833 DHX36Q9H2U1 1008 aaKnown RBP18.66■□□□□ 0.58
TSFM-201ENST00000323833 PHF20L1A8MW92 1017 aa18.65■□□□□ 0.58
TSFM-201ENST00000323833 SDR42E1Q8WUS8 393 aa18.65■□□□□ 0.58
TSFM-201ENST00000323833 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms