RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 PICALMQ13492 652 aa10.67□□□□□ -0.7
CD46-202ENST00000322918 HPS5Q9UPZ3 1129 aa10.67□□□□□ -0.7
CD46-202ENST00000322918 SLC12A7Q9Y666 1083 aa10.67□□□□□ -0.7
CD46-202ENST00000322918 ERICH2A1L162 156 aa10.67□□□□□ -0.7
CD46-202ENST00000322918 GOLGA8AA7E2F4 631 aa10.67□□□□□ -0.7
CD46-202ENST00000322918 CDC27P30260 824 aa10.67□□□□□ -0.7
CD46-202ENST00000322918 ZSCAN23Q3MJ62 389 aa10.67□□□□□ -0.7
CD46-202ENST00000322918 MPNDQ8N594 471 aa10.67□□□□□ -0.7
CD46-202ENST00000322918 SLC44A5Q8NCS7 719 aa10.67□□□□□ -0.7
CD46-202ENST00000322918 BRIP1Q9BX63 1249 aa10.67□□□□□ -0.7
CD46-202ENST00000322918 ESPNB1AK53 854 aa10.67□□□□□ -0.7
CD46-202ENST00000322918 ZBTB43O43298 467 aa10.67□□□□□ -0.7
CD46-202ENST00000322918 BBOX1O75936 387 aa10.67□□□□□ -0.7
CD46-202ENST00000322918 GNAT2P19087 354 aa10.67□□□□□ -0.7
CD46-202ENST00000322918 SLC15A2Q16348 729 aa10.67□□□□□ -0.7
CD46-202ENST00000322918 CTR9Q6PD62 1173 aa10.67□□□□□ -0.7
CD46-202ENST00000322918 CRNKL1Q9BZJ0 848 aaKnown RBP10.67□□□□□ -0.7
CD46-202ENST00000322918 STK32BQ9NY57 414 aa10.67□□□□□ -0.7
CD46-202ENST00000322918 GOLGA6L4A6NEF3 574 aa10.66□□□□□ -0.7
CD46-202ENST00000322918 CAMK4Q16566 473 aa10.66□□□□□ -0.7
CD46-202ENST00000322918 APOA5Q6Q788 366 aa10.66□□□□□ -0.7
CD46-202ENST00000322918 ATP6V1DQ9Y5K8 247 aa10.66□□□□□ -0.7
CD46-202ENST00000322918 TCHHQ07283 1943 aa10.66□□□□□ -0.7
CD46-202ENST00000322918 LAMB2P55268 1798 aa10.66□□□□□ -0.7
CD46-202ENST00000322918 SH2B2O14492 632 aaPredicted RBP10.66□□□□□ -0.7
CD46-202ENST00000322918 FDPSP14324 419 aaKnown RBP10.66□□□□□ -0.7
CD46-202ENST00000322918 WTAPQ15007 396 aa10.66□□□□□ -0.7
CD46-202ENST00000322918 TDRD7Q8NHU6 1098 aaKnown RBP10.66□□□□□ -0.7
CD46-202ENST00000322918 NOL10Q9BSC4 688 aaKnown RBP10.66□□□□□ -0.7
CD46-202ENST00000322918 SLC26A6Q9BXS9 759 aa10.66□□□□□ -0.7
CD46-202ENST00000322918 DCP1AQ9NPI6 582 aaPredicted RBP10.66□□□□□ -0.7
CD46-202ENST00000322918 UBR3Q6ZT12 1888 aa10.65□□□□□ -0.7
CD46-202ENST00000322918 SLURP2P0DP57 97 aa10.65□□□□□ -0.7
CD46-202ENST00000322918 ATP2B4P23634 1241 aa10.65□□□□□ -0.7
CD46-202ENST00000322918 SYNE3Q6ZMZ3 975 aa10.65□□□□□ -0.7
CD46-202ENST00000322918 CLEC17AQ6ZS10 378 aa10.65□□□□□ -0.7
CD46-202ENST00000322918 WDR66Q8TBY9 1149 aa10.65□□□□□ -0.7
CD46-202ENST00000322918 IGDCC4Q8TDY8 1250 aa10.65□□□□□ -0.7
CD46-202ENST00000322918 ZNF274Q96GC6 653 aaPredicted RBP10.65□□□□□ -0.7
CD46-202ENST00000322918 ALDH8A1Q9H2A2 487 aaPredicted RBP10.65□□□□□ -0.7
CD46-202ENST00000322918 LY9Q9HBG7 655 aa10.65□□□□□ -0.7
CD46-202ENST00000322918 H0YIN7 160 aa10.65□□□□□ -0.7
CD46-202ENST00000322918 ATP2B1P20020 1258 aa10.65□□□□□ -0.7
CD46-202ENST00000322918 BTDP43251 543 aa10.65□□□□□ -0.7
CD46-202ENST00000322918 RBM5P52756 815 aaKnown RBP eCLIP10.65□□□□□ -0.74e-21■■■■□ 19.4
CD46-202ENST00000322918 GNL2Q13823 731 aaKnown RBP10.65□□□□□ -0.7
CD46-202ENST00000322918 TTC6Q86TZ1 520 aa10.65□□□□□ -0.7
CD46-202ENST00000322918 C8orf76Q96K31 380 aa10.65□□□□□ -0.7
CD46-202ENST00000322918 SPATA32Q96LK8 384 aa10.65□□□□□ -0.7
CD46-202ENST00000322918 PDCL3Q9H2J4 239 aa10.65□□□□□ -0.7
CD46-202ENST00000322918 RGL2O15211 777 aa10.64□□□□□ -0.71
CD46-202ENST00000322918 ZBTB7AO95365 584 aa10.64□□□□□ -0.71
CD46-202ENST00000322918 PDE6BP35913 854 aa10.64□□□□□ -0.71
CD46-202ENST00000322918 KRT85P78386 507 aa10.64□□□□□ -0.71
CD46-202ENST00000322918 RBM10P98175 930 aaKnown RBP10.64□□□□□ -0.71
CD46-202ENST00000322918 SART3Q15020 963 aaKnown RBP10.64□□□□□ -0.71
CD46-202ENST00000322918 KRT23Q9C075 422 aa10.64□□□□□ -0.71
CD46-202ENST00000322918 TNKSO95271 1327 aa10.64□□□□□ -0.71
CD46-202ENST00000322918 MYH7P12883 1935 aa10.64□□□□□ -0.71
CD46-202ENST00000322918 BAZ2BQ9UIF8 2168 aaKnown RBP10.64□□□□□ -0.71
CD46-202ENST00000322918 TSPY2A6NKD2 308 aa10.64□□□□□ -0.71
CD46-202ENST00000322918 C21orf2O43822 256 aa10.64□□□□□ -0.71
CD46-202ENST00000322918 CACNB3P54284 484 aa10.64□□□□□ -0.71
CD46-202ENST00000322918 SPTY2D1Q68D10 685 aaPredicted RBP10.64□□□□□ -0.71
CD46-202ENST00000322918 KIAA0825Q8IV33 1275 aa10.64□□□□□ -0.71
CD46-202ENST00000322918 AGXT2Q9BYV1 514 aa10.64□□□□□ -0.71
CD46-202ENST00000322918 ATF5Q9Y2D1 282 aaPredicted RBP10.64□□□□□ -0.71
CD46-202ENST00000322918 SEMA3EO15041 775 aa10.64□□□□□ -0.71
CD46-202ENST00000322918 NPR1P16066 1061 aa10.64□□□□□ -0.71
CD46-202ENST00000322918 ESR2Q92731 530 aa10.64□□□□□ -0.71
CD46-202ENST00000322918 ATP6V0A2Q9Y487 856 aa10.64□□□□□ -0.71
CD46-202ENST00000322918 PCDHAC2Q9Y5I4 1007 aa10.64□□□□□ -0.71
CD46-202ENST00000322918 CICQ96RK0 1608 aaPredicted RBP10.63□□□□□ -0.71
CD46-202ENST00000322918 MYH13Q9UKX3 1938 aa10.63□□□□□ -0.71
CD46-202ENST00000322918 GUCY1A2P33402 732 aa10.63□□□□□ -0.71
CD46-202ENST00000322918 PLCD1P51178 756 aa10.63□□□□□ -0.71
CD46-202ENST00000322918 ALX1Q15699 326 aa10.63□□□□□ -0.71
CD46-202ENST00000322918 TEX11Q8IYF3 940 aa10.63□□□□□ -0.71
CD46-202ENST00000322918 BICD2Q8TD16 824 aa10.63□□□□□ -0.71
CD46-202ENST00000322918 CAMKK2Q96RR4 588 aa10.63□□□□□ -0.71
CD46-202ENST00000322918 CRAMP1Q96RY5 1269 aa10.63□□□□□ -0.71
CD46-202ENST00000322918 CNNM2Q9H8M5 875 aa10.63□□□□□ -0.71
CD46-202ENST00000322918 GRPEL1Q9HAV7 217 aa10.63□□□□□ -0.71
CD46-202ENST00000322918 MKNK2Q9HBH9 465 aa10.63□□□□□ -0.71
CD46-202ENST00000322918 LAMA4Q16363 1823 aa10.63□□□□□ -0.71
CD46-202ENST00000322918 DHX16O60231 1041 aaKnown RBP10.63□□□□□ -0.71
CD46-202ENST00000322918 PTMSP20962 102 aa10.63□□□□□ -0.71
CD46-202ENST00000322918 MRE11P49959 708 aa10.63□□□□□ -0.71
CD46-202ENST00000322918 HMGN5P82970 282 aaKnown RBP10.63□□□□□ -0.71
CD46-202ENST00000322918 SMARCC2Q8TAQ2 1214 aa10.63□□□□□ -0.71
CD46-202ENST00000322918 MASTLQ96GX5 879 aa10.63□□□□□ -0.71
CD46-202ENST00000322918 ALG1Q9BT22 464 aa10.63□□□□□ -0.71
CD46-202ENST00000322918 RNF41Q9H4P4 317 aaPredicted RBP10.63□□□□□ -0.71
CD46-202ENST00000322918 TTF2Q9UNY4 1162 aaKnown RBP10.63□□□□□ -0.71
CD46-202ENST00000322918 BAZ2AQ9UIF9 1905 aaKnown RBP10.63□□□□□ -0.71
CD46-202ENST00000322918 ZNF831Q5JPB2 1677 aa10.62□□□□□ -0.71
CD46-202ENST00000322918 ALDH1B1P30837 517 aa10.62□□□□□ -0.71
CD46-202ENST00000322918 HOXA10P31260 410 aaPredicted RBP10.62□□□□□ -0.71
CD46-202ENST00000322918 IARSP41252 1262 aaKnown RBP10.62□□□□□ -0.71
CD46-202ENST00000322918 PLCB2Q00722 1185 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms