RNA–Protein interactions for RNA: ENST00000321545.4

ZNF543-201, Transcript of zinc finger protein 543, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF543, Length 3,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF543-201ENST00000321545 AIFM3Q96NN9 605 aa13.2□□□□□ -0.3
ZNF543-201ENST00000321545 ALG1Q9BT22 464 aa13.2□□□□□ -0.3
ZNF543-201ENST00000321545 KRT23Q9C075 422 aa13.2□□□□□ -0.3
ZNF543-201ENST00000321545 ANGEL1Q9UNK9 670 aaKnown RBP13.2□□□□□ -0.3
ZNF543-201ENST00000321545 TFAP4Q01664 338 aa13.2□□□□□ -0.3
ZNF543-201ENST00000321545 RTN1Q16799 776 aa13.2□□□□□ -0.3
ZNF543-201ENST00000321545 VGLL2Q8N8G2 317 aa13.2□□□□□ -0.3
ZNF543-201ENST00000321545 KAT14Q9H8E8 782 aa13.2□□□□□ -0.3
ZNF543-201ENST00000321545 KCNQ5Q9NR82 932 aa13.2□□□□□ -0.3
ZNF543-201ENST00000321545 ZSWIM5Q9P217 1185 aa13.2□□□□□ -0.3
ZNF543-201ENST00000321545 ECM2O94769 699 aaPredicted RBP13.2□□□□□ -0.3
ZNF543-201ENST00000321545 GNAT2P19087 354 aa13.2□□□□□ -0.3
ZNF543-201ENST00000321545 SCRN1Q12765 414 aa13.2□□□□□ -0.3
ZNF543-201ENST00000321545 SYAP1Q96A49 352 aaPredicted RBP13.2□□□□□ -0.3
ZNF543-201ENST00000321545 UIMC1Q96RL1 719 aa13.2□□□□□ -0.3
ZNF543-201ENST00000321545 GRIK5Q16478 980 aa13.19□□□□□ -0.3
ZNF543-201ENST00000321545 ZBTB12Q9Y330 459 aaPredicted RBP13.19□□□□□ -0.3
ZNF543-201ENST00000321545 C5P01031 1676 aa13.19□□□□□ -0.3
ZNF543-201ENST00000321545 TCP10L2B9ZVM9 353 aa13.19□□□□□ -0.3
ZNF543-201ENST00000321545 GOLGA8HP0CJ92 632 aa13.19□□□□□ -0.3
ZNF543-201ENST00000321545 FGFR2P21802 821 aa13.19□□□□□ -0.3
ZNF543-201ENST00000321545 ARID4AP29374 1257 aaPredicted RBP13.19□□□□□ -0.3
ZNF543-201ENST00000321545 SLF2Q8IX21 1173 aa13.19□□□□□ -0.3
ZNF543-201ENST00000321545 CNKSR1Q969H4 720 aa13.19□□□□□ -0.3
ZNF543-201ENST00000321545 SDF4Q9BRK5 362 aa13.19□□□□□ -0.3
ZNF543-201ENST00000321545 USP48Q86UV5 1035 aa13.19□□□□□ -0.3
ZNF543-201ENST00000321545 CKAP2LQ8IYA6 745 aa13.19□□□□□ -0.3
ZNF543-201ENST00000321545 PLCD3Q8N3E9 789 aa13.19□□□□□ -0.3
ZNF543-201ENST00000321545 SENP2Q9HC62 589 aa13.19□□□□□ -0.3
ZNF543-201ENST00000321545 BAZ2BQ9UIF8 2168 aaKnown RBP13.19□□□□□ -0.3
ZNF543-201ENST00000321545 NEDD4P46934 1319 aa13.19□□□□□ -0.3
ZNF543-201ENST00000321545 F13A1P00488 732 aa13.18□□□□□ -0.3
ZNF543-201ENST00000321545 MARCKSP29966 332 aaPredicted RBP13.18□□□□□ -0.3
ZNF543-201ENST00000321545 SSRP1Q08945 709 aaKnown RBP13.18□□□□□ -0.3
ZNF543-201ENST00000321545 TOB2Q14106 344 aaPredicted RBP13.18□□□□□ -0.3
ZNF543-201ENST00000321545 CSPP1Q1MSJ5 1256 aa13.18□□□□□ -0.3
ZNF543-201ENST00000321545 BBXQ8WY36 941 aaPredicted RBP13.18□□□□□ -0.3
ZNF543-201ENST00000321545 KDM3BQ7LBC6 1761 aa13.18□□□□□ -0.3
ZNF543-201ENST00000321545 GSG1L2A8MUP6 293 aa13.18□□□□□ -0.3
ZNF543-201ENST00000321545 EVX2Q03828 476 aa13.18□□□□□ -0.3
ZNF543-201ENST00000321545 CYB5R4Q7L1T6 521 aa13.18□□□□□ -0.3
ZNF543-201ENST00000321545 LRRC37A3O60309 1634 aa13.18□□□□□ -0.3
ZNF543-201ENST00000321545 SKOR2Q2VWA4 1001 aaPredicted RBP13.18□□□□□ -0.3
ZNF543-201ENST00000321545 TTLL6Q8N841 843 aa13.18□□□□□ -0.3
ZNF543-201ENST00000321545 CPVLQ9H3G5 476 aa13.18□□□□□ -0.3
ZNF543-201ENST00000321545 CNNM2Q9H8M5 875 aa13.18□□□□□ -0.3
ZNF543-201ENST00000321545 KCNJ14Q9UNX9 436 aa13.18□□□□□ -0.3
ZNF543-201ENST00000321545 TNKSO95271 1327 aa13.17□□□□□ -0.3
ZNF543-201ENST00000321545 GADD45BO75293 160 aaPredicted RBP13.17□□□□□ -0.3
ZNF543-201ENST00000321545 SLURP2P0DP57 97 aa13.17□□□□□ -0.3
ZNF543-201ENST00000321545 CCDC73Q6ZRK6 1079 aa13.17□□□□□ -0.3
ZNF543-201ENST00000321545 TM6SF1Q9BZW5 370 aa13.17□□□□□ -0.3
ZNF543-201ENST00000321545 FTOQ9C0B1 505 aaKnown RBP eCLIP13.17□□□□□ -0.3
ZNF543-201ENST00000321545 EPB41L4AQ9HCS5 686 aaPredicted RBP13.17□□□□□ -0.3
ZNF543-201ENST00000321545 SLC10A5Q5PT55 438 aa13.17□□□□□ -0.3
ZNF543-201ENST00000321545 PLSCR1O15162 318 aa13.17□□□□□ -0.3
ZNF543-201ENST00000321545 ONECUT3O60422 494 aaPredicted RBP13.17□□□□□ -0.3
ZNF543-201ENST00000321545 CDKL5O76039 1030 aa13.17□□□□□ -0.3
ZNF543-201ENST00000321545 PDIA3P30101 505 aaKnown RBP13.17□□□□□ -0.3
ZNF543-201ENST00000321545 ISM2Q6H9L7 571 aa13.17□□□□□ -0.3
ZNF543-201ENST00000321545 ARHGAP27Q6ZUM4 889 aa13.17□□□□□ -0.3
ZNF543-201ENST00000321545 DRC7Q8IY82 874 aa13.17□□□□□ -0.3
ZNF543-201ENST00000321545 TSC1Q92574 1164 aa13.17□□□□□ -0.3
ZNF543-201ENST00000321545 PNPLA7Q6ZV29 1317 aa13.16□□□□□ -0.3
ZNF543-201ENST00000321545 USP17L3A6NCW0 530 aa13.16□□□□□ -0.3
ZNF543-201ENST00000321545 USP17L4A6NCW7 530 aa13.16□□□□□ -0.3
ZNF543-201ENST00000321545 HLA-DOAP06340 250 aa13.16□□□□□ -0.3
ZNF543-201ENST00000321545 SRGNP10124 158 aa13.16□□□□□ -0.3
ZNF543-201ENST00000321545 DPEP1P16444 411 aa13.16□□□□□ -0.3
ZNF543-201ENST00000321545 XBP1P17861 261 aa13.16□□□□□ -0.3
ZNF543-201ENST00000321545 HMGN5P82970 282 aaKnown RBP13.16□□□□□ -0.3
ZNF543-201ENST00000321545 USP17L1Q7RTZ2 530 aa13.16□□□□□ -0.3
ZNF543-201ENST00000321545 CLEC10AQ8IUN9 316 aa13.16□□□□□ -0.3
ZNF543-201ENST00000321545 NSUN4Q96CB9 384 aaKnown RBP13.16□□□□□ -0.3
ZNF543-201ENST00000321545 V9GY48 417 aaPredicted RBP13.16□□□□□ -0.3
ZNF543-201ENST00000321545 RIC1Q4ADV7 1423 aa13.16□□□□□ -0.3
ZNF543-201ENST00000321545 NASPP49321 788 aaPredicted RBP13.16□□□□□ -0.3
ZNF543-201ENST00000321545 PDILTQ8N807 584 aa13.16□□□□□ -0.3
ZNF543-201ENST00000321545 GTF3C6Q969F1 213 aa13.16□□□□□ -0.3
ZNF543-201ENST00000321545 TEKT1Q969V4 418 aa13.16□□□□□ -0.3
ZNF543-201ENST00000321545 CACNA1FO60840 1977 aa13.16□□□□□ -0.3
ZNF543-201ENST00000321545 TRMT1LQ7Z2T5 733 aaKnown RBP13.16□□□□□ -0.3
ZNF543-201ENST00000321545 GPCPD1Q9NPB8 672 aa13.16□□□□□ -0.3
ZNF543-201ENST00000321545 DOT1LQ8TEK3 1739 aa13.16□□□□□ -0.3
ZNF543-201ENST00000321545 LRRC47Q8N1G4 583 aaKnown RBP13.15□□□□□ -0.3
ZNF543-201ENST00000321545 MED23Q9ULK4 1368 aa13.15□□□□□ -0.3
ZNF543-201ENST00000321545 UQCRHLA0A096LP55 91 aa13.15□□□□□ -0.3
ZNF543-201ENST00000321545 VGLL3A8MV65 326 aa13.15□□□□□ -0.3
ZNF543-201ENST00000321545 UQCRHP07919 91 aa13.15□□□□□ -0.3
ZNF543-201ENST00000321545 NLRP5P59047 1200 aa13.15□□□□□ -0.3
ZNF543-201ENST00000321545 TTC14Q96N46 770 aa13.15□□□□□ -0.3
ZNF543-201ENST00000321545 TDRD3Q9H7E2 651 aaKnown RBP13.15□□□□□ -0.3
ZNF543-201ENST00000321545 CBX1P83916 185 aa13.15□□□□□ -0.31
ZNF543-201ENST00000321545 HEATR3Q7Z4Q2 680 aa13.15□□□□□ -0.31
ZNF543-201ENST00000321545 FBXO33Q7Z6M2 555 aa13.15□□□□□ -0.31
ZNF543-201ENST00000321545 NIM1KQ8IY84 436 aa13.15□□□□□ -0.31
ZNF543-201ENST00000321545 INTS4Q96HW7 963 aaKnown RBP13.15□□□□□ -0.31
ZNF543-201ENST00000321545 RGS17Q9UGC6 210 aaPredicted RBP13.15□□□□□ -0.31
ZNF543-201ENST00000321545 ABCC6O95255 1503 aa13.14□□□□□ -0.31
ZNF543-201ENST00000321545 ECE2O60344 883 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms