RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 IL16Q14005 1332 aa16.7■□□□□ 0.26
SYCN-201ENST00000318438 UBE4AQ14139 1066 aa16.69■□□□□ 0.26
SYCN-201ENST00000318438 LRRC26Q2I0M4 334 aa16.69■□□□□ 0.26
SYCN-201ENST00000318438 LMBR1LQ6UX01 489 aa16.69■□□□□ 0.26
SYCN-201ENST00000318438 FAM151AQ8WW52 585 aa16.69■□□□□ 0.26
SYCN-201ENST00000318438 MYLIPQ8WY64 445 aa16.69■□□□□ 0.26
SYCN-201ENST00000318438 STK31Q9BXU1 1019 aa16.69■□□□□ 0.26
SYCN-201ENST00000318438 CCDC57Q2TAC2 916 aa16.68■□□□□ 0.26
SYCN-201ENST00000318438 FAM9BQ8IZU0 186 aa16.68■□□□□ 0.26
SYCN-201ENST00000318438 FRAT2O75474 233 aaPredicted RBP16.67■□□□□ 0.26
SYCN-201ENST00000318438 PLA2G5P39877 138 aa16.67■□□□□ 0.26
SYCN-201ENST00000318438 EPHA10Q5JZY3 1008 aa16.67■□□□□ 0.26
SYCN-201ENST00000318438 VPS37DQ86XT2 251 aa16.67■□□□□ 0.26
SYCN-201ENST00000318438 TBC1D22AQ8WUA7 517 aa16.67■□□□□ 0.26
SYCN-201ENST00000318438 SEMA6BQ9H3T3 888 aa16.67■□□□□ 0.26
SYCN-201ENST00000318438 SLC45A1Q9Y2W3 748 aa16.67■□□□□ 0.26
SYCN-201ENST00000318438 TNFRSF10AO00220 468 aa16.66■□□□□ 0.26
SYCN-201ENST00000318438 SLC4A2P04920 1241 aa16.66■□□□□ 0.26
SYCN-201ENST00000318438 COL6A1P12109 1028 aa16.66■□□□□ 0.26
SYCN-201ENST00000318438 PTPRAP18433 802 aa16.66■□□□□ 0.26
SYCN-201ENST00000318438 NFIAQ12857 509 aa16.66■□□□□ 0.26
SYCN-201ENST00000318438 FBXO33Q7Z6M2 555 aa16.66■□□□□ 0.26
SYCN-201ENST00000318438 LINS1Q8NG48 757 aa16.66■□□□□ 0.26
SYCN-201ENST00000318438 TSR2Q969E8 191 aaKnown RBP16.66■□□□□ 0.26
SYCN-201ENST00000318438 MRIQ9BWK5 157 aa16.66■□□□□ 0.26
SYCN-201ENST00000318438 PUS3Q9BZE2 481 aaKnown RBP16.66■□□□□ 0.26
SYCN-201ENST00000318438 AFG3L2Q9Y4W6 797 aa16.66■□□□□ 0.26
SYCN-201ENST00000318438 DOCK3Q8IZD9 2030 aa16.65■□□□□ 0.26
SYCN-201ENST00000318438 FAM110CQ1W6H9 321 aa16.65■□□□□ 0.26
SYCN-201ENST00000318438 SCYL3Q8IZE3 742 aa16.65■□□□□ 0.26
SYCN-201ENST00000318438 DNAAF4Q8WXU2 420 aa16.65■□□□□ 0.26
SYCN-201ENST00000318438 TRIB2Q92519 343 aa16.65■□□□□ 0.26
SYCN-201ENST00000318438 PICK1Q9NRD5 415 aa16.65■□□□□ 0.26
SYCN-201ENST00000318438 GJD2Q9UKL4 321 aa16.65■□□□□ 0.26
SYCN-201ENST00000318438 TRIM75PA6NK02 468 aa16.64■□□□□ 0.25
SYCN-201ENST00000318438 PHF20L1A8MW92 1017 aa16.64■□□□□ 0.25
SYCN-201ENST00000318438 PRKAR2AP13861 404 aaKnown RBP16.64■□□□□ 0.25
SYCN-201ENST00000318438 FLIIQ13045 1269 aa16.64■□□□□ 0.25
SYCN-201ENST00000318438 TREML2Q5T2D2 321 aa16.64■□□□□ 0.25
SYCN-201ENST00000318438 HHIPL2Q6UWX4 724 aa16.64■□□□□ 0.25
SYCN-201ENST00000318438 WDR63Q8IWG1 891 aa16.64■□□□□ 0.25
SYCN-201ENST00000318438 ZFPM1Q8IX07 1006 aa16.64■□□□□ 0.25
SYCN-201ENST00000318438 FAM122AQ96E09 287 aa16.64■□□□□ 0.25
SYCN-201ENST00000318438 LBHD1Q9BQE6 289 aaPredicted RBP16.64■□□□□ 0.25
SYCN-201ENST00000318438 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.64■□□□□ 0.25
SYCN-201ENST00000318438 MAST3O60307 1309 aa16.64■□□□□ 0.25
SYCN-201ENST00000318438 FOSL2P15408 326 aa16.63■□□□□ 0.25
SYCN-201ENST00000318438 FKBP5Q13451 457 aaPredicted RBP16.63■□□□□ 0.25
SYCN-201ENST00000318438 CDC42EP5Q6NZY7 148 aa16.63■□□□□ 0.25
SYCN-201ENST00000318438 CCDC84Q86UT8 332 aaPredicted RBP16.63■□□□□ 0.25
SYCN-201ENST00000318438 TTYH1Q9H313 450 aaPredicted RBP16.63■□□□□ 0.25
SYCN-201ENST00000318438 FAM198AQ9UFP1 575 aa16.63■□□□□ 0.25
SYCN-201ENST00000318438 AGTPBP1Q9UPW5 1226 aa16.63■□□□□ 0.25
SYCN-201ENST00000318438 TMEM265A0A087WTH1 108 aa16.62■□□□□ 0.25
SYCN-201ENST00000318438 TJAP1Q5JTD0 557 aa16.62■□□□□ 0.25
SYCN-201ENST00000318438 MAP3K21Q5TCX8 1036 aa16.62■□□□□ 0.25
SYCN-201ENST00000318438 SALL2Q9Y467 1007 aaPredicted RBP16.62■□□□□ 0.25
SYCN-201ENST00000318438 FANCIQ9NVI1 1328 aa16.62■□□□□ 0.25
SYCN-201ENST00000318438 ATRNL1Q5VV63 1379 aa16.62■□□□□ 0.25
SYCN-201ENST00000318438 SLURP2P0DP57 97 aa16.61■□□□□ 0.25
SYCN-201ENST00000318438 CYP2B6P20813 491 aa16.61■□□□□ 0.25
SYCN-201ENST00000318438 TWISTNBQ3B726 338 aaPredicted RBP16.61■□□□□ 0.25
SYCN-201ENST00000318438 SPINK5Q9NQ38 1064 aaPredicted RBP16.61■□□□□ 0.25
SYCN-201ENST00000318438 DAGLAQ9Y4D2 1042 aa16.61■□□□□ 0.25
SYCN-201ENST00000318438 SHHQ15465 462 aa16.6■□□□□ 0.25
SYCN-201ENST00000318438 DIXDC1Q155Q3 683 aa16.6■□□□□ 0.25
SYCN-201ENST00000318438 CAVIN4Q5BKX8 364 aa16.6■□□□□ 0.25
SYCN-201ENST00000318438 USP38Q8NB14 1042 aa16.6■□□□□ 0.25
SYCN-201ENST00000318438 PNMA3Q9UL41 463 aa16.6■□□□□ 0.25
SYCN-201ENST00000318438 SUGT1Q9Y2Z0 365 aa16.6■□□□□ 0.25
SYCN-201ENST00000318438 C9orf50Q5SZB4 431 aa16.59■□□□□ 0.25
SYCN-201ENST00000318438 LHX8Q68G74 356 aa16.59■□□□□ 0.25
SYCN-201ENST00000318438 AK9Q5TCS8 1911 aa16.58■□□□□ 0.25
SYCN-201ENST00000318438 CCER2I3L3R5 266 aa16.58■□□□□ 0.24
SYCN-201ENST00000318438 CCND3P30281 292 aaPredicted RBP16.58■□□□□ 0.24
SYCN-201ENST00000318438 CACNB2Q08289 660 aaPredicted RBP16.58■□□□□ 0.24
SYCN-201ENST00000318438 USP40Q9NVE5 1235 aa16.58■□□□□ 0.24
SYCN-201ENST00000318438 PTPRFP10586 1907 aa16.58■□□□□ 0.24
SYCN-201ENST00000318438 MROH5Q6ZUA9 1318 aa16.57■□□□□ 0.24
SYCN-201ENST00000318438 ZNF521Q96K83 1311 aa16.57■□□□□ 0.24
SYCN-201ENST00000318438 F6X3S4 739 aa16.57■□□□□ 0.24
SYCN-201ENST00000318438 HOXD11P31277 338 aaPredicted RBP16.57■□□□□ 0.24
SYCN-201ENST00000318438 GCLCP48506 637 aaPredicted RBP16.57■□□□□ 0.24
SYCN-201ENST00000318438 ATN1P54259 1190 aaPredicted RBP16.57■□□□□ 0.24
SYCN-201ENST00000318438 BEND3Q5T5X7 828 aa16.57■□□□□ 0.24
SYCN-201ENST00000318438 SENP6Q9GZR1 1112 aaPredicted RBP16.57■□□□□ 0.24
SYCN-201ENST00000318438 LRRFIP2Q9Y608 721 aaKnown RBP16.57■□□□□ 0.24
SYCN-201ENST00000318438 PLXNB2O15031 1838 aa16.56■□□□□ 0.24
SYCN-201ENST00000318438 PEX10O60683 326 aa16.56■□□□□ 0.24
SYCN-201ENST00000318438 MAP3K12Q12852 859 aa16.56■□□□□ 0.24
SYCN-201ENST00000318438 SH3BP5LQ7L8J4 393 aa16.56■□□□□ 0.24
SYCN-201ENST00000318438 GRM8O00222 908 aa16.55■□□□□ 0.24
SYCN-201ENST00000318438 CTNND1O60716 968 aaKnown RBP16.55■□□□□ 0.24
SYCN-201ENST00000318438 ZKSCAN1P17029 563 aaPredicted RBP16.55■□□□□ 0.24
SYCN-201ENST00000318438 RGS3P49796 1198 aa16.55■□□□□ 0.24
SYCN-201ENST00000318438 SMAD3P84022 425 aaKnown RBP16.55■□□□□ 0.24
SYCN-201ENST00000318438 LRRC24Q50LG9 513 aa16.55■□□□□ 0.24
SYCN-201ENST00000318438 METTL24Q5JXM2 366 aa16.55■□□□□ 0.24
SYCN-201ENST00000318438 ZSCAN29Q8IWY8 852 aaPredicted RBP16.55■□□□□ 0.24
SYCN-201ENST00000318438 ASCC2Q9H1I8 757 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms