RNA–Protein interactions for RNA: ENST00000317633.13

SERF1A-201, Transcript of small EDRK-rich factor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1A, Length 963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-201ENST00000317633 CPA4Q9UI42 421 aa24.79■■□□□ 1.56
SERF1A-201ENST00000317633 RFX7Q2KHR2 1363 aa24.79■■□□□ 1.56
SERF1A-201ENST00000317633 ATRNL1Q5VV63 1379 aa24.79■■□□□ 1.56
SERF1A-201ENST00000317633 PHF20L1A8MW92 1017 aa24.78■■□□□ 1.56
SERF1A-201ENST00000317633 BCAR3O75815 825 aa24.78■■□□□ 1.56
SERF1A-201ENST00000317633 LDHCP07864 332 aa24.78■■□□□ 1.56
SERF1A-201ENST00000317633 HOXD10P28358 340 aa24.78■■□□□ 1.56
SERF1A-201ENST00000317633 GSTO1P78417 241 aa24.78■■□□□ 1.56
SERF1A-201ENST00000317633 MAP3K10Q02779 954 aa24.78■■□□□ 1.56
SERF1A-201ENST00000317633 MECOMQ03112 1051 aa24.78■■□□□ 1.56
SERF1A-201ENST00000317633 SLC4A8Q2Y0W8 1093 aa24.78■■□□□ 1.56
SERF1A-201ENST00000317633 PARK7Q99497 189 aaKnown RBP24.78■■□□□ 1.56
SERF1A-201ENST00000317633 ZHX2Q9Y6X8 837 aa24.78■■□□□ 1.56
SERF1A-201ENST00000317633 GPR75-ASB3A0A0A6YYF3 556 aa24.77■■□□□ 1.56
SERF1A-201ENST00000317633 MAP4K4O95819 1239 aaPredicted RBP24.77■■□□□ 1.56
SERF1A-201ENST00000317633 PICALMQ13492 652 aa24.77■■□□□ 1.56
SERF1A-201ENST00000317633 FASTKD5Q7L8L6 764 aaKnown RBP24.77■■□□□ 1.56
SERF1A-201ENST00000317633 SPATA5Q8NB90 893 aa24.77■■□□□ 1.56
SERF1A-201ENST00000317633 CLUAP1Q96AJ1 413 aa24.77■■□□□ 1.56
SERF1A-201ENST00000317633 HMG20BQ9P0W2 317 aa24.77■■□□□ 1.56
SERF1A-201ENST00000317633 CENPFP49454 3210 aa24.76■■□□□ 1.55
SERF1A-201ENST00000317633 PSMC4P43686 418 aa24.76■■□□□ 1.55
SERF1A-201ENST00000317633 MOGSQ13724 837 aa24.76■■□□□ 1.55
SERF1A-201ENST00000317633 SH3BP5LQ7L8J4 393 aa24.76■■□□□ 1.55
SERF1A-201ENST00000317633 DOCK1Q14185 1865 aa24.76■■□□□ 1.55
SERF1A-201ENST00000317633 DDTLA6NHG4 134 aaPredicted RBP24.75■■□□□ 1.55
SERF1A-201ENST00000317633 CTNND1O60716 968 aaKnown RBP24.75■■□□□ 1.55
SERF1A-201ENST00000317633 NPM3O75607 178 aaKnown RBP24.75■■□□□ 1.55
SERF1A-201ENST00000317633 PTPRAP18433 802 aa24.75■■□□□ 1.55
SERF1A-201ENST00000317633 ARID4AP29374 1257 aaPredicted RBP24.75■■□□□ 1.55
SERF1A-201ENST00000317633 ZKSCAN2Q63HK3 967 aa24.75■■□□□ 1.55
SERF1A-201ENST00000317633 DDX4Q9NQI0 724 aaKnown RBP24.75■■□□□ 1.55
SERF1A-201ENST00000317633 ADGRA2Q96PE1 1338 aa24.75■■□□□ 1.55
SERF1A-201ENST00000317633 A0A0G2JLL6 359 aaPredicted RBP24.74■■□□□ 1.55
SERF1A-201ENST00000317633 PNMA6EA0A0J9YXQ4 647 aa24.74■■□□□ 1.55
SERF1A-201ENST00000317633 FMNL1O95466 1100 aaPredicted RBP24.74■■□□□ 1.55
SERF1A-201ENST00000317633 PRRT2Q7Z6L0 340 aaPredicted RBP24.74■■□□□ 1.55
SERF1A-201ENST00000317633 SH3TC2Q8TF17 1288 aa24.74■■□□□ 1.55
SERF1A-201ENST00000317633 RAI14Q9P0K7 980 aa24.74■■□□□ 1.55
SERF1A-201ENST00000317633 SRRDQ9UH36 339 aa24.74■■□□□ 1.55
SERF1A-201ENST00000317633 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.74■■□□□ 1.55
SERF1A-201ENST00000317633 PTPRFP10586 1907 aa24.73■■□□□ 1.55
SERF1A-201ENST00000317633 UQCRFS1P1P0C7P4 283 aa24.73■■□□□ 1.55
SERF1A-201ENST00000317633 GPAT2Q6NUI2 795 aa24.73■■□□□ 1.55
SERF1A-201ENST00000317633 NSUN4Q96CB9 384 aaKnown RBP24.73■■□□□ 1.55
SERF1A-201ENST00000317633 TRIM47Q96LD4 638 aa24.73■■□□□ 1.55
SERF1A-201ENST00000317633 TNNQ9UQP3 1299 aa24.73■■□□□ 1.55
SERF1A-201ENST00000317633 AFG3L2Q9Y4W6 797 aa24.73■■□□□ 1.55
SERF1A-201ENST00000317633 MGAMO43451 1857 aa24.72■■□□□ 1.55
SERF1A-201ENST00000317633 TBC1D12O60347 775 aa24.72■■□□□ 1.55
SERF1A-201ENST00000317633 ECM2O94769 699 aaPredicted RBP24.72■■□□□ 1.55
SERF1A-201ENST00000317633 RHBDL3P58872 404 aa24.72■■□□□ 1.55
SERF1A-201ENST00000317633 RAET1EQ8TD07 263 aa24.72■■□□□ 1.55
SERF1A-201ENST00000317633 PCDH10Q9P2E7 1040 aa24.72■■□□□ 1.55
SERF1A-201ENST00000317633 SLC45A1Q9Y2W3 748 aa24.72■■□□□ 1.55
SERF1A-201ENST00000317633 PHIPQ8WWQ0 1821 aa24.71■■□□□ 1.55
SERF1A-201ENST00000317633 MYCP01106 439 aaPredicted RBP24.71■■□□□ 1.55
SERF1A-201ENST00000317633 CYP2C8P10632 490 aa24.71■■□□□ 1.55
SERF1A-201ENST00000317633 OSBPP22059 807 aa24.71■■□□□ 1.55
SERF1A-201ENST00000317633 PI16Q6UXB8 463 aa24.71■■□□□ 1.55
SERF1A-201ENST00000317633 GADL1Q6ZQY3 521 aa24.71■■□□□ 1.55
SERF1A-201ENST00000317633 TBC1D9Q6ZT07 1266 aa24.71■■□□□ 1.55
SERF1A-201ENST00000317633 TMEM57Q8N5G2 664 aa24.71■■□□□ 1.55
SERF1A-201ENST00000317633 ZNF384Q8TF68 577 aa24.71■■□□□ 1.55
SERF1A-201ENST00000317633 NOL10Q9BSC4 688 aaKnown RBP24.71■■□□□ 1.55
SERF1A-201ENST00000317633 LRP2BPQ9P2M1 347 aa24.71■■□□□ 1.55
SERF1A-201ENST00000317633 BCRP11274 1271 aa24.7■■□□□ 1.54
SERF1A-201ENST00000317633 CTGFP29279 349 aa24.7■■□□□ 1.54
SERF1A-201ENST00000317633 MCAMP43121 646 aa24.7■■□□□ 1.54
SERF1A-201ENST00000317633 FCGRTP55899 365 aa24.7■■□□□ 1.54
SERF1A-201ENST00000317633 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.7■■□□□ 1.54
SERF1A-201ENST00000317633 GPR108Q9NPR9 543 aa24.7■■□□□ 1.54
SERF1A-201ENST00000317633 MYPNQ86TC9 1320 aa24.69■■□□□ 1.54
SERF1A-201ENST00000317633 OS9Q13438 667 aaPredicted RBP24.69■■□□□ 1.54
SERF1A-201ENST00000317633 CCDC158Q5M9N0 1113 aa24.69■■□□□ 1.54
SERF1A-201ENST00000317633 OSBPL5Q9H0X9 879 aaPredicted RBP24.69■■□□□ 1.54
SERF1A-201ENST00000317633 COL2A1P02458 1487 aaPredicted RBP24.69■■□□□ 1.54
SERF1A-201ENST00000317633 GRK4P32298 578 aa24.68■■□□□ 1.54
SERF1A-201ENST00000317633 POLA2Q14181 598 aa24.68■■□□□ 1.54
SERF1A-201ENST00000317633 TTC39AQ5SRH9 613 aa24.68■■□□□ 1.54
SERF1A-201ENST00000317633 TRIM75PA6NK02 468 aa24.67■■□□□ 1.54
SERF1A-201ENST00000317633 ATP8B2P98198 1209 aa24.67■■□□□ 1.54
SERF1A-201ENST00000317633 FTSJ3Q8IY81 847 aaKnown RBP24.67■■□□□ 1.54
SERF1A-201ENST00000317633 SSH3Q8TE77 659 aa24.67■■□□□ 1.54
SERF1A-201ENST00000317633 SMCR8Q8TEV9 937 aaPredicted RBP24.67■■□□□ 1.54
SERF1A-201ENST00000317633 TBC1D2Q9BYX2 928 aa24.67■■□□□ 1.54
SERF1A-201ENST00000317633 ATAD5Q96QE3 1844 aa24.66■■□□□ 1.54
SERF1A-201ENST00000317633 BAG3O95817 575 aa24.66■■□□□ 1.54
SERF1A-201ENST00000317633 SLURP2P0DP57 97 aa24.66■■□□□ 1.54
SERF1A-201ENST00000317633 TNNI3KQ59H18 835 aa24.66■■□□□ 1.54
SERF1A-201ENST00000317633 TEX11Q8IYF3 940 aa24.66■■□□□ 1.54
SERF1A-201ENST00000317633 NKX2-3Q8TAU0 364 aa24.66■■□□□ 1.54
SERF1A-201ENST00000317633 FPGT-TNNI3KV9GXZ4 949 aa24.66■■□□□ 1.54
SERF1A-201ENST00000317633 MKI67P46013 3256 aaKnown RBP24.65■■□□□ 1.54
SERF1A-201ENST00000317633 IGSF3O75054 1194 aa24.65■■□□□ 1.54
SERF1A-201ENST00000317633 SURF6O75683 361 aaKnown RBP24.65■■□□□ 1.54
SERF1A-201ENST00000317633 PLCG2P16885 1265 aa24.65■■□□□ 1.54
SERF1A-201ENST00000317633 UBXN2AP68543 259 aa24.65■■□□□ 1.54
SERF1A-201ENST00000317633 HNRNPUQ00839 825 aaKnown RBP eCLIP24.65■■□□□ 1.54
SERF1A-201ENST00000317633 NAA16Q6N069 864 aaPredicted RBP24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms