RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 VPS37DQ86XT2 251 aa22.62■■□□□ 1.21
AP3S1-201ENST00000316788 IFNL3Q8IZI9 196 aa22.62■■□□□ 1.21
AP3S1-201ENST00000316788 WASF1Q92558 559 aa22.62■■□□□ 1.21
AP3S1-201ENST00000316788 LOC102724428A0A0B4J2F2 783 aa22.62■■□□□ 1.21
AP3S1-201ENST00000316788 B4E1Z4 1266 aa22.62■■□□□ 1.21
AP3S1-201ENST00000316788 RIOK3O14730 519 aaKnown RBP22.62■■□□□ 1.21
AP3S1-201ENST00000316788 PFKFB1P16118 471 aa22.62■■□□□ 1.21
AP3S1-201ENST00000316788 SIK1P57059 783 aa22.62■■□□□ 1.21
AP3S1-201ENST00000316788 TPM4P67936 248 aa22.62■■□□□ 1.21
AP3S1-201ENST00000316788 EN1Q05925 392 aaPredicted RBP22.62■■□□□ 1.21
AP3S1-201ENST00000316788 ELOA2Q8IYF1 753 aaPredicted RBP22.62■■□□□ 1.21
AP3S1-201ENST00000316788 PROM2Q8N271 834 aa22.62■■□□□ 1.21
AP3S1-201ENST00000316788 UPF1Q92900 1129 aaKnown RBP eCLIP22.62■■□□□ 1.21
AP3S1-201ENST00000316788 EPB41L4AQ9HCS5 686 aaPredicted RBP22.62■■□□□ 1.21
AP3S1-201ENST00000316788 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.62■■□□□ 1.21
AP3S1-201ENST00000316788 GOLGA8AA7E2F4 631 aa22.61■■□□□ 1.21
AP3S1-201ENST00000316788 IKBKBO14920 756 aa22.61■■□□□ 1.21
AP3S1-201ENST00000316788 IARSP41252 1262 aaKnown RBP22.61■■□□□ 1.21
AP3S1-201ENST00000316788 PTPAQ15257 358 aa22.61■■□□□ 1.21
AP3S1-201ENST00000316788 TMEM67Q5HYA8 995 aa22.61■■□□□ 1.21
AP3S1-201ENST00000316788 SMARCC1Q92922 1105 aaPredicted RBP22.61■■□□□ 1.21
AP3S1-201ENST00000316788 NAPBQ9H115 298 aa22.61■■□□□ 1.21
AP3S1-201ENST00000316788 TUBE1Q9UJT0 475 aa22.61■■□□□ 1.21
AP3S1-201ENST00000316788 CDC27P30260 824 aa22.6■■□□□ 1.21
AP3S1-201ENST00000316788 RASGRF1Q13972 1273 aa22.6■■□□□ 1.21
AP3S1-201ENST00000316788 TRIM29Q14134 588 aa22.6■■□□□ 1.21
AP3S1-201ENST00000316788 ZNF710Q8N1W2 664 aa22.6■■□□□ 1.21
AP3S1-201ENST00000316788 UTP14AQ9BVJ6 771 aaKnown RBP22.6■■□□□ 1.21
AP3S1-201ENST00000316788 LRRC4BQ9NT99 713 aa22.6■■□□□ 1.21
AP3S1-201ENST00000316788 FAM217BQ9NTX9 383 aaPredicted RBP22.6■■□□□ 1.21
AP3S1-201ENST00000316788 LAMB2P55268 1798 aa22.6■■□□□ 1.21
AP3S1-201ENST00000316788 MYO1BO43795 1136 aa22.6■■□□□ 1.21
AP3S1-201ENST00000316788 FMNL1O95466 1100 aaPredicted RBP22.6■■□□□ 1.21
AP3S1-201ENST00000316788 ITPK1Q13572 414 aa22.6■■□□□ 1.21
AP3S1-201ENST00000316788 AKNAD1Q5T1N1 836 aa22.6■■□□□ 1.21
AP3S1-201ENST00000316788 STAG1Q8WVM7 1258 aa22.6■■□□□ 1.21
AP3S1-201ENST00000316788 MAP3K14Q99558 947 aa22.6■■□□□ 1.21
AP3S1-201ENST00000316788 CCDC87Q9NVE4 849 aa22.6■■□□□ 1.21
AP3S1-201ENST00000316788 CUTAO60888 179 aa22.59■■□□□ 1.21
AP3S1-201ENST00000316788 MBD4O95243 580 aa22.59■■□□□ 1.21
AP3S1-201ENST00000316788 IFNAR1P17181 557 aa22.59■■□□□ 1.21
AP3S1-201ENST00000316788 ATP6V1AP38606 617 aa22.59■■□□□ 1.21
AP3S1-201ENST00000316788 EZH2Q15910 746 aaKnown RBP22.59■■□□□ 1.21
AP3S1-201ENST00000316788 DPCR1Q3MIW9 517 aa22.59■■□□□ 1.21
AP3S1-201ENST00000316788 CCDC152Q4G0S7 254 aa22.59■■□□□ 1.21
AP3S1-201ENST00000316788 SUSD4Q5VX71 490 aa22.59■■□□□ 1.21
AP3S1-201ENST00000316788 RAB11FIP4Q86YS3 637 aa22.59■■□□□ 1.21
AP3S1-201ENST00000316788 NACAP1Q9BZK3 213 aa22.59■■□□□ 1.21
AP3S1-201ENST00000316788 BCL2L12Q9HB09 334 aa22.59■■□□□ 1.21
AP3S1-201ENST00000316788 DENND2AQ9ULE3 1009 aa22.59■■□□□ 1.21
AP3S1-201ENST00000316788 WDHD1O75717 1129 aaPredicted RBP22.58■■□□□ 1.21
AP3S1-201ENST00000316788 TNNT1P13805 278 aa22.58■■□□□ 1.21
AP3S1-201ENST00000316788 PRKCSHP14314 528 aaPredicted RBP22.58■■□□□ 1.21
AP3S1-201ENST00000316788 KCNJ6P48051 423 aa22.58■■□□□ 1.21
AP3S1-201ENST00000316788 RESP18Q5W5W9 173 aa22.58■■□□□ 1.21
AP3S1-201ENST00000316788 INTS5Q6P9B9 1019 aaKnown RBP22.58■■□□□ 1.21
AP3S1-201ENST00000316788 NFXL1Q6ZNB6 911 aa22.58■■□□□ 1.21
AP3S1-201ENST00000316788 MAGEB6Q8N7X4 407 aa22.58■■□□□ 1.21
AP3S1-201ENST00000316788 NKX2-3Q8TAU0 364 aa22.58■■□□□ 1.21
AP3S1-201ENST00000316788 MPHOSPH8Q99549 860 aa22.58■■□□□ 1.21
AP3S1-201ENST00000316788 GJB4Q9NTQ9 266 aa22.58■■□□□ 1.21
AP3S1-201ENST00000316788 SLC12A7Q9Y666 1083 aa22.58■■□□□ 1.21
AP3S1-201ENST00000316788 MROH7-TTC4A0A0A0MT08 1334 aa22.57■■□□□ 1.2
AP3S1-201ENST00000316788 LY75O60449 1722 aa22.57■■□□□ 1.2
AP3S1-201ENST00000316788 GSG1L2A8MUP6 293 aa22.57■■□□□ 1.2
AP3S1-201ENST00000316788 PLSCR1O15162 318 aa22.57■■□□□ 1.2
AP3S1-201ENST00000316788 SYKP43405 635 aa22.57■■□□□ 1.2
AP3S1-201ENST00000316788 CCZ1BP86790 482 aa22.57■■□□□ 1.2
AP3S1-201ENST00000316788 CCZ1P86791 482 aaPredicted RBP22.57■■□□□ 1.2
AP3S1-201ENST00000316788 SSRP1Q08945 709 aaKnown RBP22.57■■□□□ 1.2
AP3S1-201ENST00000316788 MICU3Q86XE3 530 aa22.57■■□□□ 1.2
AP3S1-201ENST00000316788 TMTC2Q8N394 836 aa22.57■■□□□ 1.2
AP3S1-201ENST00000316788 CCDC150Q8NCX0 1101 aa22.57■■□□□ 1.2
AP3S1-201ENST00000316788 ANKRD7Q92527 254 aa22.57■■□□□ 1.2
AP3S1-201ENST00000316788 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.57■■□□□ 1.2
AP3S1-201ENST00000316788 CCNL1Q9UK58 526 aaPredicted RBP22.57■■□□□ 1.2
AP3S1-201ENST00000316788 CCDC69A6NI79 296 aa22.57■■□□□ 1.2
AP3S1-201ENST00000316788 IFIT3O14879 490 aaKnown RBP22.57■■□□□ 1.2
AP3S1-201ENST00000316788 RANBP6O60518 1105 aaKnown RBP22.57■■□□□ 1.2
AP3S1-201ENST00000316788 SF3B2Q13435 895 aaKnown RBP22.57■■□□□ 1.2
AP3S1-201ENST00000316788 TXNRD1Q16881 649 aa22.57■■□□□ 1.2
AP3S1-201ENST00000316788 CCDC94Q9BW85 323 aaPredicted RBP22.57■■□□□ 1.2
AP3S1-201ENST00000316788 RNF41Q9H4P4 317 aaPredicted RBP22.57■■□□□ 1.2
AP3S1-201ENST00000316788 ZSWIM5Q9P217 1185 aa22.57■■□□□ 1.2
AP3S1-201ENST00000316788 CAMTA2O94983 1202 aa22.56■■□□□ 1.2
AP3S1-201ENST00000316788 SKILP12757 684 aa22.56■■□□□ 1.2
AP3S1-201ENST00000316788 SART3Q15020 963 aaKnown RBP22.56■■□□□ 1.2
AP3S1-201ENST00000316788 TPD52L1Q16890 204 aaPredicted RBP22.56■■□□□ 1.2
AP3S1-201ENST00000316788 MFSD6Q6ZSS7 791 aa22.56■■□□□ 1.2
AP3S1-201ENST00000316788 CAMKK2Q96RR4 588 aa22.56■■□□□ 1.2
AP3S1-201ENST00000316788 NOL10Q9BSC4 688 aaKnown RBP22.56■■□□□ 1.2
AP3S1-201ENST00000316788 MORC2Q9Y6X9 1032 aaPredicted RBP22.56■■□□□ 1.2
AP3S1-201ENST00000316788 ECM29Q5VYK3 1845 aa22.56■■□□□ 1.2
AP3S1-201ENST00000316788 KIF2AO00139 706 aaPredicted RBP22.55■■□□□ 1.2
AP3S1-201ENST00000316788 IGHMBP2P38935 993 aaKnown RBP22.55■■□□□ 1.2
AP3S1-201ENST00000316788 GNL2Q13823 731 aaKnown RBP22.55■■□□□ 1.2
AP3S1-201ENST00000316788 NCAPHQ15003 741 aa22.55■■□□□ 1.2
AP3S1-201ENST00000316788 SHC4Q6S5L8 630 aa22.55■■□□□ 1.2
AP3S1-201ENST00000316788 NYAP1Q6ZVC0 841 aa22.55■■□□□ 1.2
AP3S1-201ENST00000316788 NBPF11Q86T75 865 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms