RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 KIF1BPQ96EK5 621 aa17.89■□□□□ 0.45
PPP1CA-201ENST00000312989 ZNF341Q9BYN7 854 aa17.89■□□□□ 0.45
PPP1CA-201ENST00000312989 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.89■□□□□ 0.45
PPP1CA-201ENST00000312989 HMMRO75330 724 aa17.88■□□□□ 0.45
PPP1CA-201ENST00000312989 INHBEP58166 350 aa17.88■□□□□ 0.45
PPP1CA-201ENST00000312989 PPP4CP60510 307 aa17.88■□□□□ 0.45
PPP1CA-201ENST00000312989 GSTO1P78417 241 aa17.88■□□□□ 0.45
PPP1CA-201ENST00000312989 NOL9Q5SY16 702 aaKnown RBP17.88■□□□□ 0.45
PPP1CA-201ENST00000312989 DCAF15Q66K64 600 aa17.88■□□□□ 0.45
PPP1CA-201ENST00000312989 ABHD8Q96I13 439 aa17.88■□□□□ 0.45
PPP1CA-201ENST00000312989 MCOLN1Q9GZU1 580 aa17.88■□□□□ 0.45
PPP1CA-201ENST00000312989 LRP2BPQ9P2M1 347 aa17.88■□□□□ 0.45
PPP1CA-201ENST00000312989 GPR25O00155 361 aa17.87■□□□□ 0.45
PPP1CA-201ENST00000312989 IRF6O14896 467 aa17.87■□□□□ 0.45
PPP1CA-201ENST00000312989 IGSF3O75054 1194 aa17.87■□□□□ 0.45
PPP1CA-201ENST00000312989 RAB11FIP3O75154 756 aa17.87■□□□□ 0.45
PPP1CA-201ENST00000312989 MAP4K4O95819 1239 aaPredicted RBP17.87■□□□□ 0.45
PPP1CA-201ENST00000312989 PICALMQ13492 652 aa17.87■□□□□ 0.45
PPP1CA-201ENST00000312989 SH3RF3Q8TEJ3 882 aaPredicted RBP17.87■□□□□ 0.45
PPP1CA-201ENST00000312989 ZNF296Q8WUU4 475 aaPredicted RBP17.87■□□□□ 0.45
PPP1CA-201ENST00000312989 HOOK2Q96ED9 719 aa17.87■□□□□ 0.45
PPP1CA-201ENST00000312989 OTUD5Q96G74 571 aa17.87■□□□□ 0.45
PPP1CA-201ENST00000312989 CHMP4BQ9H444 224 aaKnown RBP17.87■□□□□ 0.45
PPP1CA-201ENST00000312989 CSADQ9Y600 493 aa17.87■□□□□ 0.45
PPP1CA-201ENST00000312989 LDHCP07864 332 aa17.86■□□□□ 0.45
PPP1CA-201ENST00000312989 MOGSQ13724 837 aa17.86■□□□□ 0.45
PPP1CA-201ENST00000312989 NAA16Q6N069 864 aaPredicted RBP17.86■□□□□ 0.45
PPP1CA-201ENST00000312989 ERO1BQ86YB8 467 aa17.86■□□□□ 0.45
PPP1CA-201ENST00000312989 OSBPL5Q9H0X9 879 aaPredicted RBP17.86■□□□□ 0.45
PPP1CA-201ENST00000312989 CASP8AP2Q9UKL3 1982 aa17.86■□□□□ 0.45
PPP1CA-201ENST00000312989 APBB1O00213 710 aa17.85■□□□□ 0.45
PPP1CA-201ENST00000312989 CAP1Q01518 475 aa17.85■□□□□ 0.45
PPP1CA-201ENST00000312989 PPIL2Q13356 520 aa17.85■□□□□ 0.45
PPP1CA-201ENST00000312989 CLASRPQ8N2M8 674 aaKnown RBP17.85■□□□□ 0.45
PPP1CA-201ENST00000312989 FAM43AQ8N2R8 423 aa17.85■□□□□ 0.45
PPP1CA-201ENST00000312989 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.85■□□□□ 0.45
PPP1CA-201ENST00000312989 AATFQ9NY61 560 aaKnown RBP eCLIP17.85■□□□□ 0.45
PPP1CA-201ENST00000312989 PCDHB15Q9Y5E8 787 aa17.85■□□□□ 0.45
PPP1CA-201ENST00000312989 DOCK2Q92608 1830 aa17.84■□□□□ 0.45
PPP1CA-201ENST00000312989 ALDH1A1P00352 501 aa17.84■□□□□ 0.45
PPP1CA-201ENST00000312989 PPATQ06203 517 aa17.84■□□□□ 0.45
PPP1CA-201ENST00000312989 RRP1BQ14684 758 aaKnown RBP17.84■□□□□ 0.45
PPP1CA-201ENST00000312989 YTHDC1Q96MU7 727 aaKnown RBP17.84■□□□□ 0.45
PPP1CA-201ENST00000312989 KCNH4Q9UQ05 1017 aa17.84■□□□□ 0.45
PPP1CA-201ENST00000312989 SIPA1L1O43166 1804 aa17.83■□□□□ 0.45
PPP1CA-201ENST00000312989 MYO5AQ9Y4I1 1855 aaKnown RBP17.83■□□□□ 0.45
PPP1CA-201ENST00000312989 CCL15-CCL14A0A0B4J2E2 113 aa17.83■□□□□ 0.45
PPP1CA-201ENST00000312989 CAPN15O75808 1086 aa17.83■□□□□ 0.45
PPP1CA-201ENST00000312989 CRHR2Q13324 411 aa17.83■□□□□ 0.45
PPP1CA-201ENST00000312989 DGKZQ13574 1117 aa17.83■□□□□ 0.45
PPP1CA-201ENST00000312989 CCL15Q16663 113 aa17.83■□□□□ 0.45
PPP1CA-201ENST00000312989 DCTPP1Q9H773 170 aa17.83■□□□□ 0.45
PPP1CA-201ENST00000312989 FAM196BA6NMK8 535 aa17.82■□□□□ 0.44
PPP1CA-201ENST00000312989 TBC1D12O60347 775 aa17.82■□□□□ 0.44
PPP1CA-201ENST00000312989 GTF2A2P52657 109 aa17.82■□□□□ 0.44
PPP1CA-201ENST00000312989 DYNLL1P63167 89 aaKnown RBP17.82■□□□□ 0.44
PPP1CA-201ENST00000312989 TEX11Q8IYF3 940 aa17.82■□□□□ 0.44
PPP1CA-201ENST00000312989 EDC3Q96F86 508 aaKnown RBP17.82■□□□□ 0.44
PPP1CA-201ENST00000312989 DNAJC18Q9H819 358 aa17.82■□□□□ 0.44
PPP1CA-201ENST00000312989 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.82■□□□□ 0.44
PPP1CA-201ENST00000312989 FLT1P17948 1338 aa17.82■□□□□ 0.44
PPP1CA-201ENST00000312989 SMARCA5O60264 1052 aaPredicted RBP17.81■□□□□ 0.44
PPP1CA-201ENST00000312989 IDH1O75874 414 aaKnown RBP17.81■□□□□ 0.44
PPP1CA-201ENST00000312989 CYP7A1P22680 504 aa17.81■□□□□ 0.44
PPP1CA-201ENST00000312989 CTU1Q7Z7A3 348 aaKnown RBP17.81■□□□□ 0.44
PPP1CA-201ENST00000312989 METTL16Q86W50 562 aaKnown RBP17.81■□□□□ 0.44
PPP1CA-201ENST00000312989 SCYL3Q8IZE3 742 aa17.81■□□□□ 0.44
PPP1CA-201ENST00000312989 RIOK1Q9BRS2 568 aaKnown RBP17.81■□□□□ 0.44
PPP1CA-201ENST00000312989 TCRBV5S4A2TA0A5A2 114 aa17.8■□□□□ 0.44
PPP1CA-201ENST00000312989 BTBD19C9JJ37 291 aa17.8■□□□□ 0.44
PPP1CA-201ENST00000312989 PTPRAP18433 802 aa17.8■□□□□ 0.44
PPP1CA-201ENST00000312989 MAGEB6Q8N7X4 407 aa17.8■□□□□ 0.44
PPP1CA-201ENST00000312989 FKTNO75072 461 aa17.79■□□□□ 0.44
PPP1CA-201ENST00000312989 BAG3O95817 575 aa17.79■□□□□ 0.44
PPP1CA-201ENST00000312989 IFIT2P09913 472 aaKnown RBP17.79■□□□□ 0.44
PPP1CA-201ENST00000312989 ATP5JP18859 108 aa17.79■□□□□ 0.44
PPP1CA-201ENST00000312989 SNAPC2Q13487 334 aa17.79■□□□□ 0.44
PPP1CA-201ENST00000312989 ZSCAN29Q8IWY8 852 aaPredicted RBP17.79■□□□□ 0.44
PPP1CA-201ENST00000312989 MIGA1Q8NAN2 632 aa17.79■□□□□ 0.44
PPP1CA-201ENST00000312989 TGFBRAP1Q8WUH2 860 aa17.79■□□□□ 0.44
PPP1CA-201ENST00000312989 CRBNQ96SW2 442 aa17.79■□□□□ 0.44
PPP1CA-201ENST00000312989 LRRCC1Q9C099 1032 aa17.79■□□□□ 0.44
PPP1CA-201ENST00000312989 CHGBP05060 677 aa17.79■□□□□ 0.44
PPP1CA-201ENST00000312989 CETPP11597 493 aa17.79■□□□□ 0.44
PPP1CA-201ENST00000312989 JAG1P78504 1218 aa17.79■□□□□ 0.44
PPP1CA-201ENST00000312989 TMED8Q6PL24 325 aaPredicted RBP17.79■□□□□ 0.44
PPP1CA-201ENST00000312989 CCDC84Q86UT8 332 aaPredicted RBP17.79■□□□□ 0.44
PPP1CA-201ENST00000312989 MAPKAPK5Q8IW41 473 aa17.79■□□□□ 0.44
PPP1CA-201ENST00000312989 ZCCHC17Q9NP64 241 aaKnown RBP17.79■□□□□ 0.44
PPP1CA-201ENST00000312989 AFG3L2Q9Y4W6 797 aa17.79■□□□□ 0.44
PPP1CA-201ENST00000312989 ADGRA2Q96PE1 1338 aa17.78■□□□□ 0.44
PPP1CA-201ENST00000312989 DDX60LQ5H9U9 1706 aaKnown RBP17.78■□□□□ 0.44
PPP1CA-201ENST00000312989 FOCADQ5VW36 1801 aa17.78■□□□□ 0.44
PPP1CA-201ENST00000312989 GOLIM4O00461 696 aa17.78■□□□□ 0.44
PPP1CA-201ENST00000312989 CTNND1O60716 968 aaKnown RBP17.78■□□□□ 0.44
PPP1CA-201ENST00000312989 PDE6AP16499 860 aa17.78■□□□□ 0.44
PPP1CA-201ENST00000312989 PLCG2P16885 1265 aa17.78■□□□□ 0.44
PPP1CA-201ENST00000312989 SLFNL1Q499Z3 407 aa17.78■□□□□ 0.44
PPP1CA-201ENST00000312989 GPAT2Q6NUI2 795 aa17.78■□□□□ 0.44
PPP1CA-201ENST00000312989 HAUS7Q99871 368 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms