RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 ZFPM1Q8IX07 1006 aa15.16■□□□□ 0.02
CHMP2A-201ENST00000312547 FAM151AQ8WW52 585 aa15.16■□□□□ 0.02
CHMP2A-201ENST00000312547 OSBPL5Q9H0X9 879 aaPredicted RBP15.16■□□□□ 0.02
CHMP2A-201ENST00000312547 EPB41L4AQ9HCS5 686 aaPredicted RBP15.16■□□□□ 0.02
CHMP2A-201ENST00000312547 COL2A1P02458 1487 aaPredicted RBP15.15■□□□□ 0.02
CHMP2A-201ENST00000312547 TCP10L2B9ZVM9 353 aa15.15■□□□□ 0.02
CHMP2A-201ENST00000312547 USP5P45974 858 aa15.15■□□□□ 0.02
CHMP2A-201ENST00000312547 TNFAIP1Q13829 316 aa15.15■□□□□ 0.02
CHMP2A-201ENST00000312547 RASA3Q14644 834 aa15.15■□□□□ 0.02
CHMP2A-201ENST00000312547 ALX1Q15699 326 aa15.15■□□□□ 0.02
CHMP2A-201ENST00000312547 MAPKAPK5Q8IW41 473 aa15.15■□□□□ 0.02
CHMP2A-201ENST00000312547 DCPSQ96C86 337 aaKnown RBP15.15■□□□□ 0.02
CHMP2A-201ENST00000312547 DSCC1Q9BVC3 393 aa15.15■□□□□ 0.02
CHMP2A-201ENST00000312547 ATRNL1Q5VV63 1379 aa15.14■□□□□ 0.01
CHMP2A-201ENST00000312547 TNNI2P48788 182 aa15.14■□□□□ 0.01
CHMP2A-201ENST00000312547 PICALMQ13492 652 aa15.14■□□□□ 0.01
CHMP2A-201ENST00000312547 SH3BP5LQ7L8J4 393 aa15.14■□□□□ 0.01
CHMP2A-201ENST00000312547 IFNL3Q8IZI9 196 aa15.14■□□□□ 0.01
CHMP2A-201ENST00000312547 TEPSINQ96N21 525 aa15.14■□□□□ 0.01
CHMP2A-201ENST00000312547 LSG1Q9H089 658 aaKnown RBP15.14■□□□□ 0.01
CHMP2A-201ENST00000312547 DEFB129Q9H1M3 183 aa15.14■□□□□ 0.01
CHMP2A-201ENST00000312547 SCAF8Q9UPN6 1271 aaKnown RBP15.14■□□□□ 0.01
CHMP2A-201ENST00000312547 PPP2R3BQ9Y5P8 575 aa15.14■□□□□ 0.01
CHMP2A-201ENST00000312547 ZMYM6O95789 1325 aa15.14■□□□□ 0.01
CHMP2A-201ENST00000312547 PTH1RQ03431 593 aa15.13■□□□□ 0.01
CHMP2A-201ENST00000312547 TCP10Q12799 353 aa15.13■□□□□ 0.01
CHMP2A-201ENST00000312547 MAP1SQ66K74 1059 aaPredicted RBP15.13■□□□□ 0.01
CHMP2A-201ENST00000312547 KRT26Q7Z3Y9 468 aa15.13■□□□□ 0.01
CHMP2A-201ENST00000312547 SULF1Q8IWU6 871 aa15.13■□□□□ 0.01
CHMP2A-201ENST00000312547 DNAJC5GQ8N7S2 189 aa15.13■□□□□ 0.01
CHMP2A-201ENST00000312547 TMEM39BQ9GZU3 492 aa15.13■□□□□ 0.01
CHMP2A-201ENST00000312547 CLEC11AQ9Y240 323 aa15.13■□□□□ 0.01
CHMP2A-201ENST00000312547 ECM29Q5VYK3 1845 aa15.13■□□□□ 0.01
CHMP2A-201ENST00000312547 DDTLA6NHG4 134 aaPredicted RBP15.12■□□□□ 0.01
CHMP2A-201ENST00000312547 ADM5C9JUS6 153 aa15.12■□□□□ 0.01
CHMP2A-201ENST00000312547 FGAP02671 866 aa15.12■□□□□ 0.01
CHMP2A-201ENST00000312547 APPP05067 770 aa15.12■□□□□ 0.01
CHMP2A-201ENST00000312547 SBK1Q52WX2 424 aa15.12■□□□□ 0.01
CHMP2A-201ENST00000312547 CHADLQ6NUI6 762 aa15.12■□□□□ 0.01
CHMP2A-201ENST00000312547 CDC37L1Q7L3B6 337 aa15.12■□□□□ 0.01
CHMP2A-201ENST00000312547 CDAN1Q8IWY9 1227 aa15.12■□□□□ 0.01
CHMP2A-201ENST00000312547 MAP4K1Q92918 833 aa15.12■□□□□ 0.01
CHMP2A-201ENST00000312547 GLIS2Q9BZE0 524 aaPredicted RBP15.12■□□□□ 0.01
CHMP2A-201ENST00000312547 NACAP1Q9BZK3 213 aa15.12■□□□□ 0.01
CHMP2A-201ENST00000312547 DHX36Q9H2U1 1008 aaKnown RBP15.12■□□□□ 0.01
CHMP2A-201ENST00000312547 USP17L12C9JPN9 530 aa15.11■□□□□ 0.01
CHMP2A-201ENST00000312547 USP17L21D6R901 530 aa15.11■□□□□ 0.01
CHMP2A-201ENST00000312547 CTR9Q6PD62 1173 aa15.11■□□□□ 0.01
CHMP2A-201ENST00000312547 KIAA1211Q6ZU35 1233 aa15.11■□□□□ 0.01
CHMP2A-201ENST00000312547 USP48Q86UV5 1035 aa15.11■□□□□ 0.01
CHMP2A-201ENST00000312547 METTL16Q86W50 562 aaKnown RBP15.11■□□□□ 0.01
CHMP2A-201ENST00000312547 DDRGK1Q96HY6 314 aa15.11■□□□□ 0.01
CHMP2A-201ENST00000312547 NAPBQ9H115 298 aa15.11■□□□□ 0.01
CHMP2A-201ENST00000312547 ANO2Q9NQ90 1003 aa15.11■□□□□ 0.01
CHMP2A-201ENST00000312547 MCM9Q9NXL9 1143 aa15.11■□□□□ 0.01
CHMP2A-201ENST00000312547 ARPP21Q9UBL0 812 aaPredicted RBP15.11■□□□□ 0.01
CHMP2A-201ENST00000312547 SAP30BPQ9UHR5 308 aaKnown RBP15.11■□□□□ 0.01
CHMP2A-201ENST00000312547 PALD1Q9ULE6 856 aa15.11■□□□□ 0.01
CHMP2A-201ENST00000312547 DDX60LQ5H9U9 1706 aaKnown RBP15.11■□□□□ 0.01
CHMP2A-201ENST00000312547 EPB41L2O43491 1005 aaKnown RBP15.1■□□□□ 0.01
CHMP2A-201ENST00000312547 REC8O95072 547 aa15.1■□□□□ 0.01
CHMP2A-201ENST00000312547 ITGBL1O95965 494 aaPredicted RBP15.1■□□□□ 0.01
CHMP2A-201ENST00000312547 CYP2D6P10635 497 aa15.1■□□□□ 0.01
CHMP2A-201ENST00000312547 TDO2P48775 406 aa15.1■□□□□ 0.01
CHMP2A-201ENST00000312547 MAP3K10Q02779 954 aa15.1■□□□□ 0.01
CHMP2A-201ENST00000312547 C12orf60Q5U649 245 aa15.1■□□□□ 0.01
CHMP2A-201ENST00000312547 DLK2Q6UY11 383 aa15.1■□□□□ 0.01
CHMP2A-201ENST00000312547 U3KPZ7 1027 aaPredicted RBP15.1■□□□□ 0.01
CHMP2A-201ENST00000312547 FOCADQ5VW36 1801 aa15.1■□□□□ 0.01
CHMP2A-201ENST00000312547 CYP2D7A0A087X1C5 515 aa15.09■□□□□ 0.01
CHMP2A-201ENST00000312547 SMIM22K7EJ46 135 aa15.09■□□□□ 0.01
CHMP2A-201ENST00000312547 EIF5BO60841 1220 aaKnown RBP15.09■□□□□ 0.01
CHMP2A-201ENST00000312547 TOMM70O94826 608 aa15.09■□□□□ 0.01
CHMP2A-201ENST00000312547 SEC24BO95487 1268 aa15.09■□□□□ 0.01
CHMP2A-201ENST00000312547 PLCD1P51178 756 aa15.09■□□□□ 0.01
CHMP2A-201ENST00000312547 EVX2Q03828 476 aa15.09■□□□□ 0.01
CHMP2A-201ENST00000312547 NBPF12Q5TAG4 269 aaPredicted RBP15.09■□□□□ 0.01
CHMP2A-201ENST00000312547 PRAMEF18Q5VWM3 479 aa15.09■□□□□ 0.01
CHMP2A-201ENST00000312547 TTC6Q86TZ1 520 aa15.09■□□□□ 0.01
CHMP2A-201ENST00000312547 RBM46Q8TBY0 533 aaKnown RBP15.09■□□□□ 0.01
CHMP2A-201ENST00000312547 EHD4Q9H223 541 aa15.09■□□□□ 0.01
CHMP2A-201ENST00000312547 CTNNA3Q9UI47 895 aa15.09■□□□□ 0.01
CHMP2A-201ENST00000312547 ANAPC4Q9UJX5 808 aa15.09■□□□□ 0.01
CHMP2A-201ENST00000312547 RBM8AQ9Y5S9 174 aaKnown RBP15.09■□□□□ 0.01
CHMP2A-201ENST00000312547 CDK5RAP2Q96SN8 1893 aa15.09■□□□□ 0.01
CHMP2A-201ENST00000312547 SSC5DA1L4H1 1573 aa15.08■□□□□ 0
CHMP2A-201ENST00000312547 POLR3DP05423 398 aaPredicted RBP15.08■□□□□ 0
CHMP2A-201ENST00000312547 HLA-DOAP06340 250 aa15.08■□□□□ 0
CHMP2A-201ENST00000312547 GABPAQ06546 454 aa15.08■□□□□ 0
CHMP2A-201ENST00000312547 CDCA5Q96FF9 252 aa15.08■□□□□ 0
CHMP2A-201ENST00000312547 CSRNP1Q96S65 589 aa15.08■□□□□ 0
CHMP2A-201ENST00000312547 USP26Q9BXU7 913 aa15.08■□□□□ 0
CHMP2A-201ENST00000312547 PI4KBQ9UBF8 816 aa15.08■□□□□ 0
CHMP2A-201ENST00000312547 TAOK2Q9UL54 1235 aa15.08■□□□□ 0
CHMP2A-201ENST00000312547 ROBO3Q96MS0 1386 aa15.08■□□□□ 0
CHMP2A-201ENST00000312547 TRAF5O00463 557 aa15.07■□□□□ 0
CHMP2A-201ENST00000312547 TBC1D12O60347 775 aa15.07■□□□□ 0
CHMP2A-201ENST00000312547 APLP1P51693 650 aa15.07■□□□□ 0
CHMP2A-201ENST00000312547 HTRA3P83110 453 aa15.07■□□□□ 0
CHMP2A-201ENST00000312547 PPARAQ07869 468 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms