RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 C6orf50Q9HD87 102 aa9.9□□□□□ -0.82
COL6A5-202ENST00000312481 GTF2A1P52655 376 aaPredicted RBP9.9□□□□□ -0.82
COL6A5-202ENST00000312481 CCDC96Q2M329 555 aa9.9□□□□□ -0.82
COL6A5-202ENST00000312481 HS2ST1Q7LGA3 356 aa9.9□□□□□ -0.82
COL6A5-202ENST00000312481 AK8Q96MA6 479 aa9.9□□□□□ -0.82
COL6A5-202ENST00000312481 MAP4K4O95819 1239 aaPredicted RBP9.9□□□□□ -0.82
COL6A5-202ENST00000312481 FNBP4Q8N3X1 1017 aaPredicted RBP9.9□□□□□ -0.82
COL6A5-202ENST00000312481 ALG1Q9BT22 464 aa9.9□□□□□ -0.82
COL6A5-202ENST00000312481 MAP3K2Q9Y2U5 619 aa9.9□□□□□ -0.82
COL6A5-202ENST00000312481 CCDC174Q6PII3 467 aa9.9□□□□□ -0.83
COL6A5-202ENST00000312481 APLFQ8IW19 511 aaPredicted RBP9.9□□□□□ -0.83
COL6A5-202ENST00000312481 CACNA2D3Q8IZS8 1091 aa9.9□□□□□ -0.83
COL6A5-202ENST00000312481 EXOC4Q96A65 974 aa9.9□□□□□ -0.83
COL6A5-202ENST00000312481 HOOK2Q96ED9 719 aa9.9□□□□□ -0.83
COL6A5-202ENST00000312481 RAB3IPQ96QF0 476 aaPredicted RBP9.9□□□□□ -0.83
COL6A5-202ENST00000312481 AKAP12Q02952 1782 aa9.9□□□□□ -0.83
COL6A5-202ENST00000312481 TMCO5BA8MYB1 307 aa9.9□□□□□ -0.83
COL6A5-202ENST00000312481 LIG1P18858 919 aa9.9□□□□□ -0.83
COL6A5-202ENST00000312481 NLRP5P59047 1200 aa9.9□□□□□ -0.83
COL6A5-202ENST00000312481 ATP11AP98196 1134 aa9.9□□□□□ -0.83
COL6A5-202ENST00000312481 TOM1L2Q6ZVM7 507 aa9.9□□□□□ -0.83
COL6A5-202ENST00000312481 VCXQ9H320 206 aa9.9□□□□□ -0.83
COL6A5-202ENST00000312481 KNDC1Q76NI1 1749 aa9.9□□□□□ -0.83
COL6A5-202ENST00000312481 N4BP1O75113 896 aaKnown RBP9.89□□□□□ -0.83
COL6A5-202ENST00000312481 HLTFQ14527 1009 aaKnown RBP eCLIP9.89□□□□□ -0.83
COL6A5-202ENST00000312481 NBPF9Q3BBW0 867 aa9.89□□□□□ -0.83
COL6A5-202ENST00000312481 NOX5Q96PH1 765 aa9.89□□□□□ -0.83
COL6A5-202ENST00000312481 SMC6Q96SB8 1091 aa9.89□□□□□ -0.83
COL6A5-202ENST00000312481 FAM184BQ9ULE4 1060 aa9.89□□□□□ -0.83
COL6A5-202ENST00000312481 MROH5Q6ZUA9 1318 aa9.89□□□□□ -0.83
COL6A5-202ENST00000312481 IDH1O75874 414 aaKnown RBP9.89□□□□□ -0.83
COL6A5-202ENST00000312481 ZNF76P36508 570 aa9.89□□□□□ -0.83
COL6A5-202ENST00000312481 IKQ13123 557 aaPredicted RBP9.89□□□□□ -0.83
COL6A5-202ENST00000312481 RRAGBQ5VZM2 374 aa9.89□□□□□ -0.83
COL6A5-202ENST00000312481 MIPOL1Q8TD10 442 aa9.89□□□□□ -0.83
COL6A5-202ENST00000312481 CCHCR1Q8TD31 782 aa9.89□□□□□ -0.83
COL6A5-202ENST00000312481 GTF3C6Q969F1 213 aa9.89□□□□□ -0.83
COL6A5-202ENST00000312481 IFIT1BQ5T764 474 aaKnown RBP9.89□□□□□ -0.83
COL6A5-202ENST00000312481 NUP133Q8WUM0 1156 aa9.89□□□□□ -0.83
COL6A5-202ENST00000312481 SPAG5Q96R06 1193 aa9.89□□□□□ -0.83
COL6A5-202ENST00000312481 WDHD1O75717 1129 aaPredicted RBP9.89□□□□□ -0.83
COL6A5-202ENST00000312481 CNOT10Q9H9A5 744 aaKnown RBP9.89□□□□□ -0.83
COL6A5-202ENST00000312481 CPSF2Q9P2I0 782 aaKnown RBP9.89□□□□□ -0.83
COL6A5-202ENST00000312481 FERP16591 822 aa9.89□□□□□ -0.83
COL6A5-202ENST00000312481 CCDC65Q8IXS2 484 aa9.89□□□□□ -0.83
COL6A5-202ENST00000312481 BBOF1Q8ND07 529 aa9.89□□□□□ -0.83
COL6A5-202ENST00000312481 IQCGQ9H095 443 aaKnown RBP9.89□□□□□ -0.83
COL6A5-202ENST00000312481 HOMER3Q9NSC5 361 aa9.89□□□□□ -0.83
COL6A5-202ENST00000312481 POLR3EQ9NVU0 708 aa9.89□□□□□ -0.83
COL6A5-202ENST00000312481 A0A1B0GVL5 298 aa9.89□□□□□ -0.83
COL6A5-202ENST00000312481 KRT13P13646 458 aa9.89□□□□□ -0.83
COL6A5-202ENST00000312481 LARSQ9P2J5 1176 aaKnown RBP9.89□□□□□ -0.83
COL6A5-202ENST00000312481 ANXA13P27216 316 aa9.89□□□□□ -0.83
COL6A5-202ENST00000312481 DTHD1Q6ZMT9 781 aa9.89□□□□□ -0.83
COL6A5-202ENST00000312481 HOMEZQ8IX15 550 aa9.89□□□□□ -0.83
COL6A5-202ENST00000312481 AFAP1L2Q8N4X5 818 aa9.89□□□□□ -0.83
COL6A5-202ENST00000312481 KCTD17Q8N5Z5 321 aa9.89□□□□□ -0.83
COL6A5-202ENST00000312481 GOLGA8KD6RF30 607 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 TCP1P17987 556 aaKnown RBP9.88□□□□□ -0.83
COL6A5-202ENST00000312481 NLRP12P59046 1061 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 LEO1Q8WVC0 666 aaPredicted RBP9.88□□□□□ -0.83
COL6A5-202ENST00000312481 HAUS4Q9H6D7 363 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 POLKQ9UBT6 870 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 CUL4AQ13619 759 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 CCDC40Q4G0X9 1142 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 TUBB6Q9BUF5 446 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 THEGQ9P2T0 379 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 UTP11Q9Y3A2 253 aaKnown RBP9.88□□□□□ -0.83
COL6A5-202ENST00000312481 ATP5JP18859 108 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 CEBPZQ03701 1054 aaKnown RBP9.88□□□□□ -0.83
COL6A5-202ENST00000312481 ARHGAP27Q6ZUM4 889 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 TAX1BP1Q86VP1 789 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 WDR66Q8TBY9 1149 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 CENPHQ9H3R5 247 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 TPCN1Q9ULQ1 816 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 PLEKHG3A1L390 1219 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 RBM10P98175 930 aaKnown RBP9.88□□□□□ -0.83
COL6A5-202ENST00000312481 RAI14Q9P0K7 980 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 EEF1GP26641 437 aaKnown RBP9.88□□□□□ -0.83
COL6A5-202ENST00000312481 ST5P78524 1137 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 GLE1Q53GS7 698 aaKnown RBP9.88□□□□□ -0.83
COL6A5-202ENST00000312481 SARM1Q6SZW1 724 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 MPNDQ8N594 471 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 SSH3Q8TE77 659 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 IP6K1Q92551 441 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 TYW1Q9NV66 732 aaKnown RBP9.88□□□□□ -0.83
COL6A5-202ENST00000312481 PI4KAP2A4QPH2 592 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 LMNTD2Q8IXW0 634 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 PI4KAP1Q8N8J0 262 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 FBF1Q8TES7 1133 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 FAM129AQ9BZQ8 928 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 IMPG2Q9BZV3 1241 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 BOLA2Q9H3K6 86 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 DEUP1Q05D60 604 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 CALCOCO2Q13137 446 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 EFCAB13Q8IY85 973 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 KBTBD3Q8NAB2 608 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 APPBP2Q92624 585 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.88□□□□□ -0.83
COL6A5-202ENST00000312481 PPRC1Q5VV67 1664 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms